Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCACGCGCATTCCCTCTTTGATATAGTTGATGGATCAAAGTCGTGTCCCAATGAGTTCTTGAAAGATAGTGATGGTAATCGTCTTCCTACACCTAATCTGGCTTACGATCAGTGGATAGCTCAAGATTGAGCACTGATCACTCTGATTAACGCAACACTTTCGAAGGTTGCCTTTTCCTTTGTTATAGGATGCAAGTCTTCCAAAGAGGTATGGACTGCCCGAGAAAAGCGTTTTTCCTCTCTTACACACTCTCATATTCATGAATTGAAATCGGCACTACACTCTGTAGCTAAGAGCCCGACTGAGTCAATTGATGAGTATTTGATTCGAATCAAAGAGATTGTTGATAAACTTGTCACTGTCTCTGTGAAAGTTGATGATGAAGACTTACTTCTGTATACTCTAAATGGTCTGTCATCTAAATTTAACTCTTTCAAGACCTCATTTCGTACAAGAAGTGGTTCTGTAACGCTTGACGAATTACACGCCTTACTGAAGTCTAAATTGAAATTTATTGAGCAACATAACAAATTATCAACTGCCTCCATCAATCCTACAGCAATGTTCGCTCGAGGTGTCAATCAGAATCAGTCCTCTCGCGGTCGTGGTCGAAATCAAAATAATCAAGCAGGTAGAGGCTTCTTTCCTGGAAATCAAAGTGAAAGAGGAACCAGACACCTCAAGGCTCCTTCATTAATCAAAGTGGTCGTGGCAATTTCTCCCAAGGTCAGTTTAATTCTGGCCGTGGCAATTCAGATGGGAGCCAAGGAGGTTATTCTAGTGCAAATTTTGGGAGAAATCCTGGTCGTAGTCTGCCAAATTTGCAATCATCCTGGTCATGGAGCTCTCGATTGCTAAATTGTCTCAATCTATCTTATCAAGGTCGCCATCCCCCTTCCAAGCTCGCTGCAATGGCTATTGCTAATGATCCCTCATCAACCACAGCTACTTGGCTTGCCGACAGCGGATGTAACACTCATGTTACCCCTGACACTTCTTGTTTGGCCTTGAATTCTAACTTCAATGGCAAAGAGGTTCTTACTGTTGCAAACGACCAAGGACTCCCAGCTGCTCAAGCTGGTATCAGTACTCTTCTTACACCTCAAAGTGATCTTCATATGTCCAGTTTATTATGTGTACCGGATCTTTCAGCCAACTTACTATCTGTCTCTCAGTGTTGTGTGGATAATAATTTTGTTTTCACTTTTGGTGCTAATTGGTTTACAATTCAGGACAAGGACACGGGCCAAATTTTAGCTACAAGTGGAAAAATCCTGGCCGTGTAG
mRNA sequence
ATGCTTCACGCGCATTCCCTCTTTGATATAGTTGATGGATCAAAGTCGTGTCCCAATGAGTTCTTGAAAGATAGTGATGGATGCAAGTCTTCCAAAGAGGTATGGACTGCCCGAGAAAAGCGTTTTTCCTCTCTTACACACTCTCATATTCATGAATTGAAATCGGCACTACACTCTGTAGCTAAGAGCCCGACTGAGTCAATTGATGAGTATTTGATTCGAATCAAAGAGATTGTTGATAAACTTGTCACTGTCTCTGTGAAAGTTGATGATGAAGACTTACTTCTGTATACTCTAAATGGTCTGTCATCTAAATTTAACTCTTTCAAGACCTCATTTCGTACAAGAAGTGGTTCTGTAACGCTTGACGAATTACACGCCTTACTGAAGTCTAAATTGAAATTTATTGAGCAACATAACAAATTATCAACTGCCTCCATCAATCCTACAGCAATGTTCGCTCGAGGTGTCAATCAGAATCAGTCCTCTCGCGGTCGTGGTCGAAATCAAAATAATCAAGCAGGTCAGTTTAATTCTGGCCGTGGCAATTCAGATGGGAGCCAAGGAGGTTATTCTAGTGCAAATTTTGGGAGAAATCCTGGTCGTAGTCTGCCAAATTTGCAATCATCCTGGTCATGGAGCTCTCGATTGCTAAATTGTCTCAATCTATCTTATCAAGGTCGCCATCCCCCTTCCAAGCTCGCTGCAATGGCTATTGCTAATGATCCCTCATCAACCACAGCTACTTGGCTTGCCGACAGCGGATGTAACACTCATGTTACCCCTGACACTTCTTGTTTGGCCTTGAATTCTAACTTCAATGGCAAAGAGGTTCTTACTGTTGCAAACGACCAAGGACTCCCAGCTGCTCAAGCTGGTATCAGTACTCTTCTTACACCTCAAAGTGATCTTCATATGTCCAGTTTATTATGTGTACCGGATCTTTCAGCCAACTTACTATCTGTCTCTCAGTGTTGTGTGGATAATAATTTTGTTTTCACTTTTGGTGCTAATTGGTTTACAATTCAGGACAAGGACACGGGCCAAATTTTAGCTACAAGTGGAAAAATCCTGGCCGTGTAG
Coding sequence (CDS)
ATGCTTCACGCGCATTCCCTCTTTGATATAGTTGATGGATCAAAGTCGTGTCCCAATGAGTTCTTGAAAGATAGTGATGGATGCAAGTCTTCCAAAGAGGTATGGACTGCCCGAGAAAAGCGTTTTTCCTCTCTTACACACTCTCATATTCATGAATTGAAATCGGCACTACACTCTGTAGCTAAGAGCCCGACTGAGTCAATTGATGAGTATTTGATTCGAATCAAAGAGATTGTTGATAAACTTGTCACTGTCTCTGTGAAAGTTGATGATGAAGACTTACTTCTGTATACTCTAAATGGTCTGTCATCTAAATTTAACTCTTTCAAGACCTCATTTCGTACAAGAAGTGGTTCTGTAACGCTTGACGAATTACACGCCTTACTGAAGTCTAAATTGAAATTTATTGAGCAACATAACAAATTATCAACTGCCTCCATCAATCCTACAGCAATGTTCGCTCGAGGTGTCAATCAGAATCAGTCCTCTCGCGGTCGTGGTCGAAATCAAAATAATCAAGCAGGTCAGTTTAATTCTGGCCGTGGCAATTCAGATGGGAGCCAAGGAGGTTATTCTAGTGCAAATTTTGGGAGAAATCCTGGTCGTAGTCTGCCAAATTTGCAATCATCCTGGTCATGGAGCTCTCGATTGCTAAATTGTCTCAATCTATCTTATCAAGGTCGCCATCCCCCTTCCAAGCTCGCTGCAATGGCTATTGCTAATGATCCCTCATCAACCACAGCTACTTGGCTTGCCGACAGCGGATGTAACACTCATGTTACCCCTGACACTTCTTGTTTGGCCTTGAATTCTAACTTCAATGGCAAAGAGGTTCTTACTGTTGCAAACGACCAAGGACTCCCAGCTGCTCAAGCTGGTATCAGTACTCTTCTTACACCTCAAAGTGATCTTCATATGTCCAGTTTATTATGTGTACCGGATCTTTCAGCCAACTTACTATCTGTCTCTCAGTGTTGTGTGGATAATAATTTTGTTTTCACTTTTGGTGCTAATTGGTTTACAATTCAGGACAAGGACACGGGCCAAATTTTAGCTACAAGTGGAAAAATCCTGGCCGTGTAG
Protein sequence
MLHAHSLFDIVDGSKSCPNEFLKDSDGCKSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKLVTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKLSTASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFNSGRGNSDGSQGGYSSANFGRNPGRSLPNLQSSWSWSSRLLNCLNLSYQGRHPPSKLAAMAIANDPSSTTATWLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGISTLLTPQSDLHMSSLLCVPDLSANLLSVSQCCVDNNFVFTFGANWFTIQDKDTGQILATSGKILAV
Homology
BLAST of Lag0035147 vs. NCBI nr
Match:
KAA8524269.1 (hypothetical protein F0562_010692 [Nyssa sinensis])
HSP 1 Score: 191.8 bits (486), Expect = 1.0e-44
Identity = 140/415 (33.73%), Postives = 217/415 (52.29%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSDGC-------------------------------- 60
+L AHSL +DG+ CPN+F++D G
Sbjct: 77 ILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLSQTAL 136
Query: 61 ------KSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKL 120
+S+E W A E+RFS+ T S+I +LKSALH+++K +SID Y+ +IK+ D L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKG-KDSIDSYIQKIKQARDSL 196
Query: 121 VTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKL 180
+VSV ++DED+L+Y LNGL ++N+FKTS RT+S ++TL+E++A+LK + + IE +K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 181 STASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFN-----SGRGNSDGSQGGYSSANFG 240
+ + P AM A N SS RG + +N +G+ S RG S G + S NFG
Sbjct: 257 NNSPPFPGAMMATNYRPNFSS-NRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFG 316
Query: 241 --------RNPGRSLPNLQSSWSWSSRL--------LNC---LNLSYQGRHPPSKLAAMA 300
+ P +S +S ++ L+C ++ SYQG+ P +L AM+
Sbjct: 317 QSNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMS 376
Query: 301 IANDPSSTTAT--WLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGIST 352
+ S + W D+G H+T D + L + G + +T+AN Q L + +G S+
Sbjct: 377 ATYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSS 436
BLAST of Lag0035147 vs. NCBI nr
Match:
KAA8519786.1 (hypothetical protein F0562_014124 [Nyssa sinensis])
HSP 1 Score: 191.8 bits (486), Expect = 1.0e-44
Identity = 140/415 (33.73%), Postives = 217/415 (52.29%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSDGC-------------------------------- 60
+L AHSL +DG+ CPN+F++D G
Sbjct: 77 ILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLSQTAL 136
Query: 61 ------KSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKL 120
+S+E W A E+RFS+ T S+I +LKSALH+++K +SID Y+ +IK+ D L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKG-KDSIDSYIQKIKQARDSL 196
Query: 121 VTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKL 180
+VSV ++DED+L+Y LNGL ++N+FKTS RT+S ++TL+E++A+LK + + IE +K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 181 STASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFN-----SGRGNSDGSQGGYSSANFG 240
+ + P AM A N SS RG + +N +G+ S RG S G + S NFG
Sbjct: 257 NNSPPFPGAMMATNYRPNFSS-NRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFG 316
Query: 241 --------RNPGRSLPNLQSSWSWSSRL--------LNC---LNLSYQGRHPPSKLAAMA 300
+ P +S +S ++ L+C ++ SYQG+ P +L AM+
Sbjct: 317 QSNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMS 376
Query: 301 IANDPSSTTAT--WLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGIST 352
+ S + W D+G H+T D + L + G + +T+AN Q L + +G S+
Sbjct: 377 ATYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSS 436
BLAST of Lag0035147 vs. NCBI nr
Match:
KAA8535282.1 (hypothetical protein F0562_030285 [Nyssa sinensis])
HSP 1 Score: 191.0 bits (484), Expect = 1.7e-44
Identity = 140/415 (33.73%), Postives = 216/415 (52.05%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSDGC-------------------------------- 60
+L AHSL +DG+ CPN+F++D G
Sbjct: 77 ILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLSQTAL 136
Query: 61 ------KSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKL 120
+S+E W A E+RFS+ T S+I +LKSALH+++K +SID Y+ +IK D L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKG-KDSIDSYIQKIKRARDSL 196
Query: 121 VTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKL 180
+VSV ++DED+L+Y LNGL ++N+FKTS RT+S ++TL+E++A+LK + + IE +K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 181 STASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFN-----SGRGNSDGSQGGYSSANFG 240
+ + P AM A N SS RG + +N +G+ S RG S G + S NFG
Sbjct: 257 NNSPPFPGAMMATNYRPNFSS-NRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFG 316
Query: 241 --------RNPGRSLPNLQSSWSWSSRL--------LNC---LNLSYQGRHPPSKLAAMA 300
+ P +S +S ++ L+C ++ SYQG+ P +L AM+
Sbjct: 317 QSNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMS 376
Query: 301 IANDPSSTTAT--WLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGIST 352
+ S + W D+G H+T D + L + G + +T+AN Q L + +G S+
Sbjct: 377 ATYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSS 436
BLAST of Lag0035147 vs. NCBI nr
Match:
KAA8516701.1 (hypothetical protein F0562_016793 [Nyssa sinensis])
HSP 1 Score: 190.7 bits (483), Expect = 2.3e-44
Identity = 140/415 (33.73%), Postives = 217/415 (52.29%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSDGC-------------------------------- 60
+L AHSL +DG+ CPN+F++D G
Sbjct: 77 ILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLSQTAL 136
Query: 61 ------KSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKL 120
+S+E W A E+RFS+ T S+I +LKSALH+++K +SID Y+ +IK+ D L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKG-KDSIDSYIQKIKQARDSL 196
Query: 121 VTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKL 180
+VSV ++DED+L+Y LNGL ++N+FKTS RT+S ++TL+E++A+LK + + IE +K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 181 STASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFN-----SGRGNSDGSQGGYSSANFG 240
+ + P AM A N SS RG + +N +G+ S RG S G + S NFG
Sbjct: 257 NNSPPFPGAMMATNYRPNFSS-NRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFG 316
Query: 241 --------RNPGRSLPNLQSSWSWSSRL--------LNC---LNLSYQGRHPPSKLAAMA 300
+ P +S +S ++ L+C ++ SYQG+ P +L AM+
Sbjct: 317 QSNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMS 376
Query: 301 IANDPSSTTAT--WLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGIST 352
+ S + W D+G H+T D + L + G + +T+AN Q L + +G S+
Sbjct: 377 ATYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSS 436
BLAST of Lag0035147 vs. NCBI nr
Match:
KAA8521875.1 (hypothetical protein F0562_012811 [Nyssa sinensis])
HSP 1 Score: 190.7 bits (483), Expect = 2.3e-44
Identity = 140/415 (33.73%), Postives = 217/415 (52.29%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSDGC-------------------------------- 60
+L AHSL +DG+ CPN+F++D G
Sbjct: 383 ILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLSQTAL 442
Query: 61 ------KSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKL 120
+S+E W A E+RFS+ T S+I +LKSALH+++K +SID Y+ +IK+ D L
Sbjct: 443 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKG-KDSIDSYIQKIKQARDSL 502
Query: 121 VTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKL 180
+VSV ++DED+L+Y LNGL ++N+FKTS RT+S ++TL+E++A+LK + + IE +K
Sbjct: 503 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 562
Query: 181 STASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFN-----SGRGNSDGSQGGYSSANFG 240
+ + P AM A N SS RG + +N +G+ S RG S G + S NFG
Sbjct: 563 NNSPPFPGAMMATNYRPNFSS-NRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFG 622
Query: 241 --------RNPGRSLPNLQSSWSWSSRL--------LNC---LNLSYQGRHPPSKLAAMA 300
+ P +S +S ++ L+C ++ SYQG+ P +L AM+
Sbjct: 623 QSNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMS 682
Query: 301 IANDPSSTTAT--WLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGIST 352
+ S + W D+G H+T D + L + G + +T+AN Q L + +G S+
Sbjct: 683 ATYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSS 742
BLAST of Lag0035147 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 80.9 bits (198), Expect = 3.3e-14
Identity = 82/335 (24.48%), Postives = 158/335 (47.16%), Query Frame = 0
Query: 30 SSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKLVTVSVKV 89
++ ++W K +++ ++ H+ +L++ L K T++ID+Y+ + D+L + +
Sbjct: 105 TAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKG-TKTIDDYMQGLVTRFDQLALLGKPM 164
Query: 90 DDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELH-ALLKSKLKFIEQHNKLSTASIN 149
D ++ + L L ++ + TL E+H LL + K + +S+A++
Sbjct: 165 DHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKIL----AVSSATVI 224
Query: 150 PTAMFARGVNQNQSSRGRGRNQNNQAGQFNSGRGNSDGSQGGYSSANFGRNPGRSLPNLQ 209
P + A V+ ++ N N+ ++++ N++ SS NF N +S P L
Sbjct: 225 P--ITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLG 284
Query: 210 S---------SWSWSSRLLNCLNLSYQGRHPPSKL------AAMAIANDPSSTTATWLAD 269
S S+L + L+ S + PPS A +A+ + SS WL D
Sbjct: 285 KCQICGVQGHSAKRCSQLQHFLS-SVNSQQPPSPFTPWQPRANLALGSPYSSN--NWLLD 344
Query: 270 SGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGISTLLTPQSDLHMSSLLCVP 329
SG H+T D + L+L+ + G + + VA+ +P + G ++L T L++ ++L VP
Sbjct: 345 SGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVP 404
Query: 330 DLSANLLSVSQCCVDNNFVFTFGANWFTIQDKDTG 349
++ NL+SV + C N F F ++D +TG
Sbjct: 405 NIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTG 429
BLAST of Lag0035147 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 4.6e-08
Identity = 73/331 (22.05%), Postives = 132/331 (39.88%), Query Frame = 0
Query: 30 SSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKLVTVSVKV 89
++ ++W K +++ ++ H+ +L+ ++ R D+L + +
Sbjct: 105 TAAQIWETLRKIYANPSYGHVTQLR----------------FITRF----DQLALLGKPM 164
Query: 90 DDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKLSTASINP 149
D ++ + L L + + +L E+H L ++ + N I
Sbjct: 165 DHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITA 224
Query: 150 TAMFAR--GVNQNQSSRGRGRNQNNQAGQFNSGRGNSDGSQGGYSSANFGRNPGRSLPNL 209
+ R N+NQ++RG RN NN + NS + +S GS+ R P L
Sbjct: 225 NVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSD------NRQPKPYLGRC 284
Query: 210 QSSWSWSSRLLNCLNL--------SYQGRHP--PSKLAAMAIANDPSSTTATWLADSGCN 269
Q C L Q P P + A N P + WL DSG
Sbjct: 285 QICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNAN-NWLLDSGAT 344
Query: 270 THVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGISTLLTPQSDLHMSSLLCVPDLSA 329
H+T D + L+ + + G + + +A+ +P G ++L T L ++ +L VP++
Sbjct: 345 HHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHK 404
Query: 330 NLLSVSQCCVDNNFVFTFGANWFTIQDKDTG 349
NL+SV + C N F F ++D +TG
Sbjct: 405 NLISVYRLCNTNRVSVEFFPASFQVKDLNTG 408
BLAST of Lag0035147 vs. ExPASy TrEMBL
Match:
A0A5J5A1U7 (Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_010692 PE=4 SV=1)
HSP 1 Score: 191.8 bits (486), Expect = 4.9e-45
Identity = 140/415 (33.73%), Postives = 217/415 (52.29%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSDGC-------------------------------- 60
+L AHSL +DG+ CPN+F++D G
Sbjct: 77 ILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLSQTAL 136
Query: 61 ------KSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKL 120
+S+E W A E+RFS+ T S+I +LKSALH+++K +SID Y+ +IK+ D L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKG-KDSIDSYIQKIKQARDSL 196
Query: 121 VTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKL 180
+VSV ++DED+L+Y LNGL ++N+FKTS RT+S ++TL+E++A+LK + + IE +K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 181 STASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFN-----SGRGNSDGSQGGYSSANFG 240
+ + P AM A N SS RG + +N +G+ S RG S G + S NFG
Sbjct: 257 NNSPPFPGAMMATNYRPNFSS-NRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFG 316
Query: 241 --------RNPGRSLPNLQSSWSWSSRL--------LNC---LNLSYQGRHPPSKLAAMA 300
+ P +S +S ++ L+C ++ SYQG+ P +L AM+
Sbjct: 317 QSNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMS 376
Query: 301 IANDPSSTTAT--WLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGIST 352
+ S + W D+G H+T D + L + G + +T+AN Q L + +G S+
Sbjct: 377 ATYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSS 436
BLAST of Lag0035147 vs. ExPASy TrEMBL
Match:
A0A5J4ZPW7 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_014124 PE=4 SV=1)
HSP 1 Score: 191.8 bits (486), Expect = 4.9e-45
Identity = 140/415 (33.73%), Postives = 217/415 (52.29%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSDGC-------------------------------- 60
+L AHSL +DG+ CPN+F++D G
Sbjct: 77 ILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLSQTAL 136
Query: 61 ------KSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKL 120
+S+E W A E+RFS+ T S+I +LKSALH+++K +SID Y+ +IK+ D L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKG-KDSIDSYIQKIKQARDSL 196
Query: 121 VTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKL 180
+VSV ++DED+L+Y LNGL ++N+FKTS RT+S ++TL+E++A+LK + + IE +K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 181 STASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFN-----SGRGNSDGSQGGYSSANFG 240
+ + P AM A N SS RG + +N +G+ S RG S G + S NFG
Sbjct: 257 NNSPPFPGAMMATNYRPNFSS-NRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFG 316
Query: 241 --------RNPGRSLPNLQSSWSWSSRL--------LNC---LNLSYQGRHPPSKLAAMA 300
+ P +S +S ++ L+C ++ SYQG+ P +L AM+
Sbjct: 317 QSNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMS 376
Query: 301 IANDPSSTTAT--WLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGIST 352
+ S + W D+G H+T D + L + G + +T+AN Q L + +G S+
Sbjct: 377 ATYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSS 436
BLAST of Lag0035147 vs. ExPASy TrEMBL
Match:
A0A5J5B049 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_030285 PE=4 SV=1)
HSP 1 Score: 191.0 bits (484), Expect = 8.4e-45
Identity = 140/415 (33.73%), Postives = 216/415 (52.05%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSDGC-------------------------------- 60
+L AHSL +DG+ CPN+F++D G
Sbjct: 77 ILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLSQTAL 136
Query: 61 ------KSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKL 120
+S+E W A E+RFS+ T S+I +LKSALH+++K +SID Y+ +IK D L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKG-KDSIDSYIQKIKRARDSL 196
Query: 121 VTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKL 180
+VSV ++DED+L+Y LNGL ++N+FKTS RT+S ++TL+E++A+LK + + IE +K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 181 STASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFN-----SGRGNSDGSQGGYSSANFG 240
+ + P AM A N SS RG + +N +G+ S RG S G + S NFG
Sbjct: 257 NNSPPFPGAMMATNYRPNFSS-NRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFG 316
Query: 241 --------RNPGRSLPNLQSSWSWSSRL--------LNC---LNLSYQGRHPPSKLAAMA 300
+ P +S +S ++ L+C ++ SYQG+ P +L AM+
Sbjct: 317 QSNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMS 376
Query: 301 IANDPSSTTAT--WLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGIST 352
+ S + W D+G H+T D + L + G + +T+AN Q L + +G S+
Sbjct: 377 ATYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSS 436
BLAST of Lag0035147 vs. ExPASy TrEMBL
Match:
A0A2N9I6U7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49609 PE=4 SV=1)
HSP 1 Score: 191.0 bits (484), Expect = 8.4e-45
Identity = 127/369 (34.42%), Postives = 211/369 (57.18%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSD--GCKSSKEVWTAREKRFSSLTHSHIHELKSALH 60
+L A+++ VDG++ CP +F+ +S+ G ++ VW+ EKR++S + S+I LK LH
Sbjct: 138 ILKAYAILSFVDGTQLCPPQFVTNSEVVGETTAHGVWSILEKRYTSASRSNILNLKMDLH 197
Query: 61 SVAKSPTESIDEYLIRIKEIVDKLVTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSG 120
++ K +S++ +L ++K+ D+L V V++D+E++L L GL ++++F T+ RTR+
Sbjct: 198 NIKKETNDSVNTFLQKVKDARDRLAAVGVQIDNEEILHIVLRGLPHEYHAFSTAIRTRND 257
Query: 121 SVTLDELHAL-------LKSKLKFIEQHNKLS-TASIN-PTAMFA----RGVNQNQSSRG 180
+ + +++H L LKS + + H+ ++ A+ N A+F+ RG +N +RG
Sbjct: 258 ATSFEDIHVLVTVEEQSLKSSIDLAKDHSHMAMVANTNRNNALFSYQGNRGRGRNNFTRG 317
Query: 181 RGRNQNNQAGQFNSGRG--NSDGSQGGYSSANFGRNPGRSLPNLQSSWSWSSRLLNCLNL 240
RGRN N N GRG N+ G G SS +F RN +S + + ++
Sbjct: 318 RGRNFN------NGGRGNYNNSGGNSGSSSGHFNRN---------NSGHAAIDCYHRMDY 377
Query: 241 SYQGRHPPSKLAAMAIA-NDPSSTTATWLADSGCNTHVTPDTSCLALNSNFNGKEVLTVA 300
+YQG+ PPSKLAAMA N +S + W++D+G H TP+ S + + ++ G ++ TV
Sbjct: 378 AYQGKQPPSKLAAMATTYNAQNSYQSYWISDTGATDHFTPNLSTIPDHQDYAGGDLATVG 437
Query: 301 NDQGLPAAQAGISTLLTPQSDLHMSSLLCVPDLSANLLSVSQCCVDNNFVFTFGANWFTI 352
N LP G S L + +LCVP +S+NLLSV++ C DNN F F A+ F I
Sbjct: 438 NGNALPITHIGNSQLKASSHLFQLRKILCVPSMSSNLLSVNKFCRDNNCCFQFDAHQFKI 491
BLAST of Lag0035147 vs. ExPASy TrEMBL
Match:
A0A5J4ZT09 (Flavin-containing monooxygenase OS=Nyssa sinensis OX=561372 GN=F0562_012811 PE=3 SV=1)
HSP 1 Score: 190.7 bits (483), Expect = 1.1e-44
Identity = 140/415 (33.73%), Postives = 217/415 (52.29%), Query Frame = 0
Query: 1 MLHAHSLFDIVDGSKSCPNEFLKDSDGC-------------------------------- 60
+L AHSL +DG+ CPN+F++D G
Sbjct: 383 ILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLSQTAL 442
Query: 61 ------KSSKEVWTAREKRFSSLTHSHIHELKSALHSVAKSPTESIDEYLIRIKEIVDKL 120
+S+E W A E+RFS+ T S+I +LKSALH+++K +SID Y+ +IK+ D L
Sbjct: 443 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKG-KDSIDSYIQKIKQARDSL 502
Query: 121 VTVSVKVDDEDLLLYTLNGLSSKFNSFKTSFRTRSGSVTLDELHALLKSKLKFIEQHNKL 180
+VSV ++DED+L+Y LNGL ++N+FKTS RT+S ++TL+E++A+LK + + IE +K
Sbjct: 503 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 562
Query: 181 STASINPTAMFARGVNQNQSSRGRGRNQNNQAGQFN-----SGRGNSDGSQGGYSSANFG 240
+ + P AM A N SS RG + +N +G+ S RG S G + S NFG
Sbjct: 563 NNSPPFPGAMMATNYRPNFSS-NRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFG 622
Query: 241 --------RNPGRSLPNLQSSWSWSSRL--------LNC---LNLSYQGRHPPSKLAAMA 300
+ P +S +S ++ L+C ++ SYQG+ P +L AM+
Sbjct: 623 QSNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMS 682
Query: 301 IANDPSSTTAT--WLADSGCNTHVTPDTSCLALNSNFNGKEVLTVANDQGLPAAQAGIST 352
+ S + W D+G H+T D + L + G + +T+AN Q L + +G S+
Sbjct: 683 ATYNTGSDCSPNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSS 742
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q94HW2 | 3.3e-14 | 24.48 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 4.6e-08 | 22.05 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A5J5A1U7 | 4.9e-45 | 33.73 | Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F05... | [more] |
A0A5J4ZPW7 | 4.9e-45 | 33.73 | Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0... | [more] |
A0A5J5B049 | 8.4e-45 | 33.73 | Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0... | [more] |
A0A2N9I6U7 | 8.4e-45 | 34.42 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49609 PE=4 SV=1 | [more] |
A0A5J4ZT09 | 1.1e-44 | 33.73 | Flavin-containing monooxygenase OS=Nyssa sinensis OX=561372 GN=F0562_012811 PE=3... | [more] |
Match Name | E-value | Identity | Description | |