Lag0035137 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035137
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionAcyl carrier protein
Locationchr3: 15455704 .. 15457928 (-)
RNA-Seq ExpressionLag0035137
SyntenyLag0035137
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACTTGACTCCTTGGTACCCGCCAGTGAATTAATGAGAGTTGAGAGTTGTGCAGTACCTGAATTATCTTCATTGCTTTTGCTGCTTTCACCATCAACATCCACAATGAAGTCCAGTAAGTTATGCTGGTTCTACCTATTTTACCTTCATCACCTTTGGAGAGGTTTTTGGCTTTGTAAATATACTCTCTCACACTCTCTCATGCGTGCTTATTTTAGTCAATAGGAGAGGGTTCTTAGGCTTTCTGGTTTTGTTTGGATCTCTCAGTCCTATTTTCCTAATGTACAATAAACGTACATTGTCTTCTTTGGTTGCAGTAATGCATATATTATTAAAGAGAAAAATGAATAGTTTTTTCCTGTCTTGGATCCAAGTAAATTACAAGTCTTCTGGAGAACATGGTGCTCGGGCAATGCTTATATAGATTTTAGCCGTGTTTTCCCTCCTGGGTAGGAAGAGGAGTTATTATTGTTATGTTTATTATTTTTTCTTTATCGAGGGTGGTAATAAGACCTCAGTATGTATTCTATATATCCATCTCAAACCTGGACGAAGTTGGTTGGATCTAGAACGCTCTGGAGCTCTAGTTTCTGTATTTTCCTGAGGGGGAAAGATGTTTAAAATTTAAATGTACGAATTCTGGACTTGGTTTTAAAGGTACGGATTCTGGATTTGATGTTTAAATGTAAGAATTCTGGTTTTGTTCTCCCTTTTTTCCTTCTCAGAATATTGGTTAAAAGCAATTGATGTAGTGTAGACTCCGTGCATCAACACTTTTTTTCTTTCCTAATAGTAAAATATTCTTACCTCTTCAGGTCAAAAATTCTATTTTGGATACCTTTGCCTGTAGAGTCTGCAGACTTCAAACCTTACATATTTTGATTTTGTTAGTATGGAAATTTAAGTTGTTATGCATGTTAAAACTTCATGTTAGGTACGATAGATTTACCTTTTTTTGTAATGAATAAACCAACTTTCATTGAGAAAAAAATGAAAGAATACAAGGACATCCAAAGAAACAAACCCACAAAAGAAACCCCCTTTAAAGGAAGGATCGCCATTCAAGCGGGATATTATCTAGAGAATAATTACAAAAGACTTGGACATTGAGGCCCAAAGAGAAACATAGAACCTAGTAAAGACCAACACATCTGACGGATCCCTTTCAAGGCCATGAAACACTCTATTATTTCTCTCATCCCATAGGCCCCAAAATAAAGCACACATCCCAACTAGCCAAAAAATCTCCCCTTCTCACGAAACGATAGATGGAGAAGGAACTACTGGATTGTCTCTCTGTAGTCTCTAAAGCTTAACCTGTATCTCAAAGACTTGATATGACGGGGATGCAGTTTTGCAAGCAGAGTAAGTTTGTATTCATGGGTGACTTTTTCAAGCGAGGCAACTATAGTAGTGTCATAGTGTGCTTACTAATCAGGAGGGAGAATAGGAGAGGAGGGGAGAGTGAGCAGCAACTTGACGGTATCTGATGTTTATAGTGCCGTGGTATCATGGTCTAAATTGGAATTGTGTGATTGATGCTTCTGCTCTGTTCTTAATTCTCTTGTTGTCTCGATTGGTGTTTATCAAAGGGTGAGTTGCACTAGACCCTTAGAAAAGGTTCTTGAATTGAAGCGTGGAGTGGAAAAAGTTTTTTTTGTTTTTGTTTTTCTTTTTCCAAATAAAACGAGCTTTCATTGAGGGAAAAAAAAAAGAAAGAATACAAAAGGGGCACATTGCCCAAAAATGGAGCGAAAAGAACACCTAAATACCTAATAAATAAAAAAAAAGACTCCAATTCAAAAGATAATAAGACTTTAAGAAGGCCTTTTAAAGTGCACAATAGAAAAATAGAAATAATTTCATGTGAGTTTTCTTTTTCATCCTCTCTTAAAGAGATAGGATTTAATTACTCGTTTGTCTCTATGAAATACTTGTCTCGGTAGACTGCCAGACGCATTTGAAACTCCATAGAGTTTTGCACTCGTTTCTCATTCTTTCTTTCTTTCACTGGTTGATAATCGATATTATAAATTCTCTGGCAGGTTACTCCGACGGCTCATTTCCAAAATGATTTAGGATTGGATAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGGTTTGAAATTCCTGACAATGAAGCGGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAG

mRNA sequence

ATGGTACTTGACTCCTTGGTACCCGCCAGTGAATTAATGAGAGTTGAGAGTTGTGCAGTACCTGAATTATCTTCATTGCTTTTGCTGCTTTCACCATCAACATCCACAATGAAGTCCAGAGGGAGAATAGGAGAGGAGGGGAGAGTGAGCAGCAACTTGACGGTATCTGATGTTTATAGTGCCGTGGTTACTCCGACGGCTCATTTCCAAAATGATTTAGGATTGGATAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGGTTTGAAATTCCTGACAATGAAGCGGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAG

Coding sequence (CDS)

ATGGTACTTGACTCCTTGGTACCCGCCAGTGAATTAATGAGAGTTGAGAGTTGTGCAGTACCTGAATTATCTTCATTGCTTTTGCTGCTTTCACCATCAACATCCACAATGAAGTCCAGAGGGAGAATAGGAGAGGAGGGGAGAGTGAGCAGCAACTTGACGGTATCTGATGTTTATAGTGCCGTGGTTACTCCGACGGCTCATTTCCAAAATGATTTAGGATTGGATAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGGTTTGAAATTCCTGACAATGAAGCGGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAG

Protein sequence

MVLDSLVPASELMRVESCAVPELSSLLLLLSPSTSTMKSRGRIGEEGRVSSNLTVSDVYSAVVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK
Homology
[Close]
BLAST of Lag0035137 vs. NCBI nr
Match: XP_022988425.1 (acyl carrier protein 2, mitochondrial-like [Cucurbita maxima] >XP_023516258.1 acyl carrier protein 2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.9 bits (294), Expect = 6.2e-23
Identity = 68/119 (57.14%), Postives = 82/119 (68.91%), Query Frame = 0 

Query: 13  MRVESCAVPELSSLLLLLSPSTSTMKS------RGRIGEEGRVSSNL-----TVSDVYSA 72
           +RV   A+P+ +S +  ++P  +  +       RG   ++  V+  +         V  +
Sbjct: 11  LRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISVVKKFQKVDPS 70

Query: 73  VVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK 121
            VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK
Sbjct: 71  KVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK 129

[Close]
BLAST of Lag0035137 vs. NCBI nr
Match: XP_038878437.1 (acyl carrier protein 2, mitochondrial [Benincasa hispida] >XP_038878438.1 acyl carrier protein 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-22
Identity = 68/119 (57.14%), Postives = 83/119 (69.75%), Query Frame = 0 

Query: 13  MRVESCAVPELSSLLLLLSPSTS------TMKSRGRIGEEGRVSSNL-----TVSDVYSA 72
           +RV   A+P  +S +L ++P  +      + + RG   ++  V+  +         V  +
Sbjct: 11  LRVHVKALPHTNSPVLYVNPFNAIRCRLFSEEVRGSFLDKSEVTDRVISVVKKFQKVDPS 70

Query: 73  VVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK 121
            VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEAD+INAINLAVDFIASHPQAK
Sbjct: 71  KVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVDFIASHPQAK 129

[Close]
BLAST of Lag0035137 vs. NCBI nr
Match: XP_022157065.1 (acyl carrier protein 2, mitochondrial [Momordica charantia])

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22
Identity = 68/119 (57.14%), Postives = 80/119 (67.23%), Query Frame = 0 

Query: 13  MRVESCAVPELSSLLLLLSPSTSTMKS------RGRIGEEGRVSSNLT-----VSDVYSA 72
           +RV   A+P+ +S +L   P  +  +       RG   ++  V+  +         V  +
Sbjct: 11  LRVHVQALPKTNSPILYSHPFNAIRRRLFSEEVRGSFLDKSEVTERVVSVVKKFQKVDPS 70

Query: 73  VVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK 121
            VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKIN INLAVDFIASHPQAK
Sbjct: 71  KVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINTINLAVDFIASHPQAK 129

[Close]
BLAST of Lag0035137 vs. NCBI nr
Match: KAG7022181.1 (Acyl carrier protein 2, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22
Identity = 68/119 (57.14%), Postives = 86/119 (72.27%), Query Frame = 0 

Query: 13  MRVESCAVPELSSLLLLLSPSTS------TMKSRGRIGEEGRVSSN-LTVSDVYSAV--- 72
           +RV   A+P+ ++ +L ++P  +      + + RG   ++  V+   ++V   +  V   
Sbjct: 62  IRVHVQALPKSNTPVLYVNPFNAIRRCLFSQEVRGSFLDKSEVADRVISVVKKFQKVDPC 121

Query: 73  -VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK 121
            VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNE+DKINAINLAVDFIASHPQAK
Sbjct: 122 KVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIASHPQAK 180

[Close]
BLAST of Lag0035137 vs. NCBI nr
Match: XP_022961004.1 (acyl carrier protein 2, mitochondrial-like [Cucurbita moschata] >KAG6590117.1 Acyl carrier protein 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023784.1 Acyl carrier protein 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22
Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 0 

Query: 13  MRVESCAVPELSSLLLLLSPSTSTMKS------RGRIGEEGRVSSNL-----TVSDVYSA 72
           +RV   A+P+ +S +  ++P  +  +       RG   ++  V+  +         V  +
Sbjct: 11  LRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISVVKKFQKVDPS 70

Query: 73  VVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK 121
            VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHP+AK
Sbjct: 71  KVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPKAK 129

[Close]
BLAST of Lag0035137 vs. ExPASy Swiss-Prot
Match: O80800 (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-21
Identity = 51/58 (87.93%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 63  VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK 121
           VTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNEADKI +I+LAVDFIASHPQAK
Sbjct: 69  VTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVDFIASHPQAK 126

[Close]
BLAST of Lag0035137 vs. ExPASy Swiss-Prot
Match: P53665 (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.9e-17
Identity = 38/57 (66.67%), Postives = 50/57 (87.72%), Query Frame = 0 

Query: 63  VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQA 120
           VTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD EADKI++ +LA++++ +HP +
Sbjct: 65  VTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVYNHPMS 121

[Close]
BLAST of Lag0035137 vs. ExPASy Swiss-Prot
Match: P11943 (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-15
Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 63  VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQA 120
           +T TAHF NDLGLDSLDTVEVVMA+EEEF  EIPD +AD+I++++ AV++I S P A
Sbjct: 77  ITETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQPDA 133

[Close]
BLAST of Lag0035137 vs. ExPASy Swiss-Prot
Match: Q10217 (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 0 

Query: 63  VTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK 121
           VTPT+ F NDLGLDSLD VEVVMA+EEEF  +IPD +AD+I ++  A+ +I  +P+AK
Sbjct: 55  VTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPDKDADEITSVGDAISYITKNPEAK 112

[Close]
BLAST of Lag0035137 vs. ExPASy Swiss-Prot
Match: P80920 (Acyl carrier protein OS=Leucothrix mucor OX=45248 GN=acpP PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-12
Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 0 

Query: 58  VYSAVVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASH 117
           V  A VT  A F +DLG DSLDTVE+VMALEEEF  EIPD EA+KI  + LA+D++ SH
Sbjct: 18  VDEAEVTNAASFVDDLGADSLDTVELVMALEEEFGTEIPDEEAEKITTVQLAIDYVKSH 76

The following BLAST results are available for this feature:
BLAST of Lag0035137 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022988425.16.2e-2357.14acyl carrier protein 2, mitochondrial-like [Cucurbita maxima] >XP_023516258.1 ac... [more]
XP_038878437.11.1e-2257.14acyl carrier protein 2, mitochondrial [Benincasa hispida] >XP_038878438.1 acyl c... [more]
XP_022157065.11.8e-2257.14acyl carrier protein 2, mitochondrial [Momordica charantia][more]
KAG7022181.11.8e-2257.14Acyl carrier protein 2, mitochondrial, partial [Cucurbita argyrosperma subsp. ar... [more]
XP_022961004.11.8e-2256.30acyl carrier protein 2, mitochondrial-like [Cucurbita moschata] >KAG6590117.1 Ac... [more]
BLAST of Lag0035137 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O808002.1e-2187.93Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 ... [more]
P536656.9e-1766.67Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 ... [more]
P119433.8e-1566.67Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74... [more]
Q102171.6e-1360.34Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strai... [more]
P809201.0e-1262.71Acyl carrier protein OS=Leucothrix mucor OX=45248 GN=acpP PE=1 SV=2[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)TIGRFAMTIGR00517TIGR00517coord: 58..116
e-value: 1.1E-22
score: 77.7
IPR003231Acyl carrier protein (ACP)PANTHERPTHR20863ACYL CARRIER PROTEINcoord: 54..120
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 34..117
score: 15.044081
IPR036736ACP-like superfamilyGENE3D1.10.1200.10coord: 48..120
e-value: 2.9E-21
score: 77.4
IPR036736ACP-like superfamilySUPERFAMILY47336ACP-likecoord: 57..116
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 63..103
e-value: 4.3E-8
score: 33.4
IPR009081Phosphopantetheine binding ACP domainPROSITEPS50075CARRIERcoord: 37..117
score: 15.168506
NoneNo IPR availablePANTHERPTHR20863:SF61ACYL CARRIER PROTEIN 2, MITOCHONDRIAL-LIKEcoord: 54..120
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 72..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035137.1Lag0035137.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0005739 mitochondrion
molecular_function GO:0000035 acyl binding
molecular_function GO:0000036 acyl carrier activity