Lag0035129 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035129
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr3: 15400977 .. 15401900 (-)
RNA-Seq ExpressionLag0035129
SyntenyLag0035129
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCAAGGATCCTCAAATTTCTTCCTTGTTCTAATTCATGGTATGATGATAACATGAATGCTTGGGAGACTCAAGAATACTGTGGCAGATGGTGGCTGGATGATAAGGGCAACATCAGAGAAGAGCATAGCTTAAGGATTTGCCTAGTTCTATGTTGGCAAATATGGACGGCTAGAAACATATTACTCCACAACAACTACCAGCCAGATGTGGAGCACATAGAGCAGCAGATTTCAAACTACTTAATGGAGATGAAGTCAAGTGGAGAGGCGAACCTGATAATCCATAGCCGAACGATCGATAACAGAGGCGTAGAGGAGAGATCGAGGAATCGGTGGCTGCCGATCTCTGATGGAAAGTGGCGGCTCAACATTGAAACATCTTGGATCGAAAAGGAGGGGTGTGACGGTCTTGGCTGGGTTCTCAGAATAGGGGATGGAGATCTTCTGGCGGCAGGGTACCGGTTCATTAATCGGCCATGGCACATCAACTGGCTGGAAACCCTTGCCCTGTCGGAAGGCCTTCAAACCATTCCCACTGATTCGCTTTTGGTGCGGGTAGAAATCGACTCCCTCCAGGTGGCTCGCTTCATCAACGACAAGGATGAAGATGAGACTGAGTTGCTGAACTTTGTTATGGAAGCTAAAGCCCTAATTTCGGGCAAGAATATTTACTCTTTGGTTCATGTGCCTAGAGTTAACAATGTCATGGCCCACAATCTGGCGAGGAAGGCTACTGAATGTAGGGGTTCTTTTAATTGTTTTGGAAATTTTCCTTCTTGCATCCTTTCTCTTAATGAGGAAGACATTGGTTTTGTATCTCATGCACATGGGGTCCCTGTCCCATGGGCATTCACTTTTCAGGAGCTATTGCTCGAGTCTAATGCTTATTTCTTATTCTCAAAAAAAATAAAAAAATAA

mRNA sequence

ATGCCTTCAAGGATCCTCAAATTTCTTCCTTGTTCTAATTCATGGTATGATGATAACATGAATGCTTGGGAGACTCAAGAATACTGTGGCAGATGGTGGCTGGATGATAAGGGCAACATCAGAGAAGAGCATAGCTTAAGGATTTGCCTAGTTCTATGTTGGCAAATATGGACGGCTAGAAACATATTACTCCACAACAACTACCAGCCAGATGTGGAGCACATAGAGCAGCAGATTTCAAACTACTTAATGGAGATGAAGTCAAGTGGAGAGGCGAACCTGATAATCCATAGCCGAACGATCGATAACAGAGGCGTAGAGGAGAGATCGAGGAATCGGTGGCTGCCGATCTCTGATGGAAAGTGGCGGCTCAACATTGAAACATCTTGGATCGAAAAGGAGGGGTGTGACGGTCTTGGCTGGGTTCTCAGAATAGGGGATGGAGATCTTCTGGCGGCAGGGTACCGGTTCATTAATCGGCCATGGCACATCAACTGGCTGGAAACCCTTGCCCTGTCGGAAGGCCTTCAAACCATTCCCACTGATTCGCTTTTGGTGCGGGTAGAAATCGACTCCCTCCAGGTGGCTCGCTTCATCAACGACAAGGATGAAGATGAGACTGAGTTGCTGAACTTTGTTATGGAAGCTAAAGCCCTAATTTCGGGCAAGAATATTTACTCTTTGGTTCATGTGCCTAGAGTTAACAATGTCATGGCCCACAATCTGGCGAGGAAGGCTACTGAATGTAGGGGTTCTTTTAATTGTTTTGGAAATTTTCCTTCTTGCATCCTTTCTCTTAATGAGGAAGACATTGGTTTTGTATCTCATGCACATGGGGTCCCTGTCCCATGGGCATTCACTTTTCAGGAGCTATTGCTCGAGTCTAATGCTTATTTCTTATTCTCAAAAAAAATAAAAAAATAA

Coding sequence (CDS)

ATGCCTTCAAGGATCCTCAAATTTCTTCCTTGTTCTAATTCATGGTATGATGATAACATGAATGCTTGGGAGACTCAAGAATACTGTGGCAGATGGTGGCTGGATGATAAGGGCAACATCAGAGAAGAGCATAGCTTAAGGATTTGCCTAGTTCTATGTTGGCAAATATGGACGGCTAGAAACATATTACTCCACAACAACTACCAGCCAGATGTGGAGCACATAGAGCAGCAGATTTCAAACTACTTAATGGAGATGAAGTCAAGTGGAGAGGCGAACCTGATAATCCATAGCCGAACGATCGATAACAGAGGCGTAGAGGAGAGATCGAGGAATCGGTGGCTGCCGATCTCTGATGGAAAGTGGCGGCTCAACATTGAAACATCTTGGATCGAAAAGGAGGGGTGTGACGGTCTTGGCTGGGTTCTCAGAATAGGGGATGGAGATCTTCTGGCGGCAGGGTACCGGTTCATTAATCGGCCATGGCACATCAACTGGCTGGAAACCCTTGCCCTGTCGGAAGGCCTTCAAACCATTCCCACTGATTCGCTTTTGGTGCGGGTAGAAATCGACTCCCTCCAGGTGGCTCGCTTCATCAACGACAAGGATGAAGATGAGACTGAGTTGCTGAACTTTGTTATGGAAGCTAAAGCCCTAATTTCGGGCAAGAATATTTACTCTTTGGTTCATGTGCCTAGAGTTAACAATGTCATGGCCCACAATCTGGCGAGGAAGGCTACTGAATGTAGGGGTTCTTTTAATTGTTTTGGAAATTTTCCTTCTTGCATCCTTTCTCTTAATGAGGAAGACATTGGTTTTGTATCTCATGCACATGGGGTCCCTGTCCCATGGGCATTCACTTTTCAGGAGCTATTGCTCGAGTCTAATGCTTATTTCTTATTCTCAAAAAAAATAAAAAAATAA

Protein sequence

MPSRILKFLPCSNSWYDDNMNAWETQEYCGRWWLDDKGNIREEHSLRICLVLCWQIWTARNILLHNNYQPDVEHIEQQISNYLMEMKSSGEANLIIHSRTIDNRGVEERSRNRWLPISDGKWRLNIETSWIEKEGCDGLGWVLRIGDGDLLAAGYRFINRPWHINWLETLALSEGLQTIPTDSLLVRVEIDSLQVARFINDKDEDETELLNFVMEAKALISGKNIYSLVHVPRVNNVMAHNLARKATECRGSFNCFGNFPSCILSLNEEDIGFVSHAHGVPVPWAFTFQELLLESNAYFLFSKKIKK
Homology
BLAST of Lag0035129 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-21
Identity = 61/210 (29.05%), Postives = 105/210 (50.00%), Query Frame = 0

Query: 43  EHSLRICLVLCWQIWTARNILLHNNYQPDVEHIEQQISNYLMEMKSSGEANLIIHSRTID 102
           E   R  +++ WQIW  RN  +     P+   I+  I  Y++   +    NL   S   D
Sbjct: 6   EEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIIN-SAGRNTNLKGKSTNKD 65

Query: 103 ---NRGVEERSRNRWLPISDGKWRLNIETSWIEKEGCDGLGWVLRIGDGDLLAAGYRFIN 162
               R +E+ +  +W P +   W+LN   +W       G+GW+LR   G+++ A  R I 
Sbjct: 66  LHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIR 125

Query: 163 RPWHINWLETLALSEGLQTIPTDSLL-VRVEIDSLQVARFINDKDEDETELLNFVMEAKA 222
              +I +LE +A+ EGL+ I  +    + +E DSL+    ++ + +D+TE++  + E   
Sbjct: 126 AERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQ 185

Query: 223 LISGKNIYSLVHVPRVNNVMAHNLARKATE 249
           ++    I S+ H+ R  N +AH LAR+A E
Sbjct: 186 MMKDMEIVSMRHISREANKVAHGLARRAME 214

BLAST of Lag0035129 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 107.1 bits (266), Expect = 2.8e-19
Identity = 66/226 (29.20%), Postives = 110/226 (48.67%), Query Frame = 0

Query: 43  EHSLRICLVLCWQIWTARNILLHNNYQPDVEHIEQQISNYLMEMKSSGEANLIIHSRTID 102
           +  L + L+  W IW  RN ++          + QQ++ ++ E     E +L +  +T++
Sbjct: 7   DEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSMLHKTLN 66

Query: 103 NRGVEERSRNRWLPISDGKWRLNIETSWIEKEGCDGLGWVLRIGDGDLLAAGYRFINRPW 162
           N       + +W P     W LN + SW +     G+GW++R  DGD++ AG RF+    
Sbjct: 67  N-------KLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACN 126

Query: 163 HINWLETLALSEGLQTIPTDSLL--VRVEIDSLQVARFINDKDEDETELLNFVMEAKALI 222
           ++  LE  A+ EGL+ +    +L  + +E DS +V   +N K ED T+    V E   L 
Sbjct: 127 NVKLLEASAILEGLRNLTNLGVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLR 186

Query: 223 SGKNIYSLVHVPRVNNVMAHNLARKATECRGSF---NCFGNFPSCI 264
               I +   V R  N  AH+LA++A+  R S    +CF N+ S +
Sbjct: 187 DSCEILAFAKVGRETNGCAHSLAQRASVLRESMIWVDCFPNWLSIL 225

BLAST of Lag0035129 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 106.3 bits (264), Expect = 4.8e-19
Identity = 60/218 (27.52%), Postives = 106/218 (48.62%), Query Frame = 0

Query: 43  EHSLRICLVLCWQIWTARNILLHNNYQPDVEHIEQQISNYLMEMKSSGEANLIIHSRTID 102
           E   R  +++ WQIW  RN  +      +   I+  I  Y++   +  + NL   S   D
Sbjct: 6   EEERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIIN-SAGRDTNLKGKSANKD 65

Query: 103 ---NRGVEERSRNRWLPISDGKWRLNIETSWIEKEGCDGLGWVLRIGDGDLLAAGYRFIN 162
               R + + +  RW P +   W+LN + +W       G+GW+LR   G+++ A  R I 
Sbjct: 66  LHLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIR 125

Query: 163 RPWHINWLETLALSEGLQTIPTDSLL---------VRVEIDSLQVARFINDKDEDETELL 222
              +I +LE +A+ EGL+ I  +            + +E DSL+    ++ + +D+TE++
Sbjct: 126 TERNITYLEVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEII 185

Query: 223 NFVMEAKALISGKNIYSLVHVPRVNNVMAHNLARKATE 249
             + E   ++    I S+ H+ R  N +AH+LAR+A E
Sbjct: 186 WLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAME 222

BLAST of Lag0035129 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 96.3 bits (238), Expect = 4.9e-16
Identity = 61/204 (29.90%), Postives = 100/204 (49.02%), Query Frame = 0

Query: 12  SNSWYDDNMNAWETQEYCGRW-WLDDKGNIREEHSLRICLVLCWQIWTARNILLHNNYQP 71
           +N +Y D  N W T+EY   W WL DK    EE   R  ++ C QIW  RN  +      
Sbjct: 159 ANFFYIDRTN-WTTKEY---WEWLMDKAG--EEERRRSMIIAC-QIWEMRNKSIFKGVHS 218

Query: 72  DVEHIEQQISNYLMEMKSSGEANLIIHSRTIDN-RGVEERSRNRWLPISDGKWRLNIETS 131
           +   I+  I  Y++   +  + NL   S+     R + + +R RW P +   W+LN + +
Sbjct: 219 ETRDIQLAIDRYIIN-SAGQDTNLKRKSKDFHPIRRIGDNTRARWKPPTSNSWKLNTDAA 278

Query: 132 WIEKEGCDGLGWVLRIGDGDLLAAGYRFINRPWHINWLETLALSEGLQTIPTDSLL-VRV 191
           W      DG+GW+LR   G+++  G R I    +I +LE +A+ EGL+ I  +    + +
Sbjct: 279 WRADTNTDGIGWILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHL 338

Query: 192 EIDSLQVARFINDKDEDETELLNF 213
           E DSL+    ++   + + +L  F
Sbjct: 339 ESDSLEAIHLLHRHVKIKLKLFGF 354

BLAST of Lag0035129 vs. NCBI nr
Match: XP_022154991.1 (uncharacterized protein LOC111022134 isoform X2 [Momordica charantia])

HSP 1 Score: 93.2 bits (230), Expect = 4.2e-15
Identity = 57/193 (29.53%), Postives = 94/193 (48.70%), Query Frame = 0

Query: 23  WETQEYCGRW-WLDDKGNIREEHSLRICLVLCWQIWTARNILLHNNYQPDVEHIEQQISN 82
           W T+EY   W WL DK    EE   R  ++ C QIW  RN  +      +   I+  I  
Sbjct: 134 WTTKEY---WEWLMDKAG--EEERRRSMIIAC-QIWEMRNKSIFKGVHSETRDIQLAIDR 193

Query: 83  YLMEMKSSGEANLIIHSRTIDN-RGVEERSRNRWLPISDGKWRLNIETSWIEKEGCDGLG 142
           Y++   +  + NL   S+     R + + +R RW P +   W+LN + +W      DG+G
Sbjct: 194 YIIN-SAGQDTNLKRKSKDFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIG 253

Query: 143 WVLRIGDGDLLAAGYRFINRPWHINWLETLALSEGLQTIPTDSLL-VRVEIDSLQVARFI 202
           W+LR   G+++  G R I    +I +LE +A+ EGL+ I  +    + +E DSL+    +
Sbjct: 254 WILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIHLL 313

Query: 203 NDKDEDETELLNF 213
           +   + + +L  F
Sbjct: 314 HRHVKIKLKLFGF 319

BLAST of Lag0035129 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-21
Identity = 61/210 (29.05%), Postives = 105/210 (50.00%), Query Frame = 0

Query: 43  EHSLRICLVLCWQIWTARNILLHNNYQPDVEHIEQQISNYLMEMKSSGEANLIIHSRTID 102
           E   R  +++ WQIW  RN  +     P+   I+  I  Y++   +    NL   S   D
Sbjct: 6   EEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIIN-SAGRNTNLKGKSTNKD 65

Query: 103 ---NRGVEERSRNRWLPISDGKWRLNIETSWIEKEGCDGLGWVLRIGDGDLLAAGYRFIN 162
               R +E+ +  +W P +   W+LN   +W       G+GW+LR   G+++ A  R I 
Sbjct: 66  LHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIR 125

Query: 163 RPWHINWLETLALSEGLQTIPTDSLL-VRVEIDSLQVARFINDKDEDETELLNFVMEAKA 222
              +I +LE +A+ EGL+ I  +    + +E DSL+    ++ + +D+TE++  + E   
Sbjct: 126 AERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQ 185

Query: 223 LISGKNIYSLVHVPRVNNVMAHNLARKATE 249
           ++    I S+ H+ R  N +AH LAR+A E
Sbjct: 186 MMKDMEIVSMRHISREANKVAHGLARRAME 214

BLAST of Lag0035129 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-19
Identity = 66/226 (29.20%), Postives = 110/226 (48.67%), Query Frame = 0

Query: 43  EHSLRICLVLCWQIWTARNILLHNNYQPDVEHIEQQISNYLMEMKSSGEANLIIHSRTID 102
           +  L + L+  W IW  RN ++          + QQ++ ++ E     E +L +  +T++
Sbjct: 7   DEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSMLHKTLN 66

Query: 103 NRGVEERSRNRWLPISDGKWRLNIETSWIEKEGCDGLGWVLRIGDGDLLAAGYRFINRPW 162
           N       + +W P     W LN + SW +     G+GW++R  DGD++ AG RF+    
Sbjct: 67  N-------KLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACN 126

Query: 163 HINWLETLALSEGLQTIPTDSLL--VRVEIDSLQVARFINDKDEDETELLNFVMEAKALI 222
           ++  LE  A+ EGL+ +    +L  + +E DS +V   +N K ED T+    V E   L 
Sbjct: 127 NVKLLEASAILEGLRNLTNLGVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLR 186

Query: 223 SGKNIYSLVHVPRVNNVMAHNLARKATECRGSF---NCFGNFPSCI 264
               I +   V R  N  AH+LA++A+  R S    +CF N+ S +
Sbjct: 187 DSCEILAFAKVGRETNGCAHSLAQRASVLRESMIWVDCFPNWLSIL 225

BLAST of Lag0035129 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-19
Identity = 60/218 (27.52%), Postives = 106/218 (48.62%), Query Frame = 0

Query: 43  EHSLRICLVLCWQIWTARNILLHNNYQPDVEHIEQQISNYLMEMKSSGEANLIIHSRTID 102
           E   R  +++ WQIW  RN  +      +   I+  I  Y++   +  + NL   S   D
Sbjct: 6   EEERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIIN-SAGRDTNLKGKSANKD 65

Query: 103 ---NRGVEERSRNRWLPISDGKWRLNIETSWIEKEGCDGLGWVLRIGDGDLLAAGYRFIN 162
               R + + +  RW P +   W+LN + +W       G+GW+LR   G+++ A  R I 
Sbjct: 66  LHLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIR 125

Query: 163 RPWHINWLETLALSEGLQTIPTDSLL---------VRVEIDSLQVARFINDKDEDETELL 222
              +I +LE +A+ EGL+ I  +            + +E DSL+    ++ + +D+TE++
Sbjct: 126 TERNITYLEVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEII 185

Query: 223 NFVMEAKALISGKNIYSLVHVPRVNNVMAHNLARKATE 249
             + E   ++    I S+ H+ R  N +AH+LAR+A E
Sbjct: 186 WLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAME 222

BLAST of Lag0035129 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-16
Identity = 61/204 (29.90%), Postives = 100/204 (49.02%), Query Frame = 0

Query: 12  SNSWYDDNMNAWETQEYCGRW-WLDDKGNIREEHSLRICLVLCWQIWTARNILLHNNYQP 71
           +N +Y D  N W T+EY   W WL DK    EE   R  ++ C QIW  RN  +      
Sbjct: 159 ANFFYIDRTN-WTTKEY---WEWLMDKAG--EEERRRSMIIAC-QIWEMRNKSIFKGVHS 218

Query: 72  DVEHIEQQISNYLMEMKSSGEANLIIHSRTIDN-RGVEERSRNRWLPISDGKWRLNIETS 131
           +   I+  I  Y++   +  + NL   S+     R + + +R RW P +   W+LN + +
Sbjct: 219 ETRDIQLAIDRYIIN-SAGQDTNLKRKSKDFHPIRRIGDNTRARWKPPTSNSWKLNTDAA 278

Query: 132 WIEKEGCDGLGWVLRIGDGDLLAAGYRFINRPWHINWLETLALSEGLQTIPTDSLL-VRV 191
           W      DG+GW+LR   G+++  G R I    +I +LE +A+ EGL+ I  +    + +
Sbjct: 279 WRADTNTDGIGWILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHL 338

Query: 192 EIDSLQVARFINDKDEDETELLNF 213
           E DSL+    ++   + + +L  F
Sbjct: 339 ESDSLEAIHLLHRHVKIKLKLFGF 354

BLAST of Lag0035129 vs. ExPASy TrEMBL
Match: A0A6J1DQC9 (uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-15
Identity = 57/193 (29.53%), Postives = 94/193 (48.70%), Query Frame = 0

Query: 23  WETQEYCGRW-WLDDKGNIREEHSLRICLVLCWQIWTARNILLHNNYQPDVEHIEQQISN 82
           W T+EY   W WL DK    EE   R  ++ C QIW  RN  +      +   I+  I  
Sbjct: 134 WTTKEY---WEWLMDKAG--EEERRRSMIIAC-QIWEMRNKSIFKGVHSETRDIQLAIDR 193

Query: 83  YLMEMKSSGEANLIIHSRTIDN-RGVEERSRNRWLPISDGKWRLNIETSWIEKEGCDGLG 142
           Y++   +  + NL   S+     R + + +R RW P +   W+LN + +W      DG+G
Sbjct: 194 YIIN-SAGQDTNLKRKSKDFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIG 253

Query: 143 WVLRIGDGDLLAAGYRFINRPWHINWLETLALSEGLQTIPTDSLL-VRVEIDSLQVARFI 202
           W+LR   G+++  G R I    +I +LE +A+ EGL+ I  +    + +E DSL+    +
Sbjct: 254 WILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIHLL 313

Query: 203 NDKDEDETELLNF 213
           +   + + +L  F
Sbjct: 314 HRHVKIKLKLFGF 319

BLAST of Lag0035129 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06
Identity = 47/210 (22.38%), Postives = 80/210 (38.10%), Query Frame = 0

Query: 52  LCWQIWTARNILLHNNYQPDVEHIEQQISNYLMEMKSSGEANLIIHSRTIDNRGVEERSR 111
           L W+IW + N L+ N+ +   +   +   N   E       N + + +   NR  +    
Sbjct: 47  LMWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLD----NTMTNEQQNGNRNADPSRN 106

Query: 112 NRWLPISDGKWRLNIETSWIEKEGCDGLGWVLRIGDGDLLAAGYRFINRPWHINWLETLA 171
            +W P    K + N + S  E+    GLGW+LR   G ++  G             E   
Sbjct: 107 TKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECST 166

Query: 172 LSEGLQ-TIPTDSLLVRVEIDSLQVARFINDKDEDETELLNFVMEAKALISGKNIYSLVH 231
           L   +Q +       V  E D+  + R IN K  +   L +F+   ++ I          
Sbjct: 167 LIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSFESIEFSF 226

Query: 232 VPRVNNVMAHNLARKATECRGSFNCFGNFP 261
             R  N  A  LA++A +    ++ F + P
Sbjct: 227 KHREQNGCADFLAKQAIKENTQWSLFHSCP 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022143535.16.7e-2129.05uncharacterized protein LOC111013412 [Momordica charantia][more]
XP_022155262.12.8e-1929.20uncharacterized protein LOC111022403 [Momordica charantia][more]
XP_022156777.14.8e-1927.52uncharacterized protein LOC111023608 [Momordica charantia][more]
XP_022154990.14.9e-1629.90uncharacterized protein LOC111022134 isoform X1 [Momordica charantia][more]
XP_022154991.14.2e-1529.53uncharacterized protein LOC111022134 isoform X2 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CP263.2e-2129.05uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DNV91.4e-1929.20uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DSV12.3e-1927.52uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DL642.4e-1629.90uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DQC92.0e-1529.53uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
AT5G65005.12.9e-0622.38Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 119..248
e-value: 4.7E-10
score: 41.6
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 128..246
e-value: 2.2E-13
score: 50.1
NoneNo IPR availablePANTHERPTHR47723OS05G0353850 PROTEINcoord: 106..271
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 124..244
e-value: 1.48277E-12
score: 61.5612
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 123..247

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035129.1Lag0035129.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity