Lag0034980 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034980
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H
Locationchr3: 13216566 .. 13217712 (-)
RNA-Seq ExpressionLag0034980
SyntenyLag0034980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATATCAGACCGGCGTCGGGAAGACAGGGGAAAGAGGCACCAGGTCGAAGGAAGAGACCGGAGTCGACCTGAGCACTCCTCGGCCAATGGCCGAGGCCGACCAGAAGCCAAGGAGCTGCAAGGCCGTGCAGAGCCTAAGTCCAGGTTCGACAGGTATACGACACTGACAGCTTCGCTTGAACAGGTCTTGGCCTCAATACAGGACACGAATCTGATGAAACACCCAGAAAAGTTGAGATCAGATCCCGACAGGAGAAACCGAAACAAATATTGCATGTTCCACGGAGATCACGACCATACAACCCGAGAGTGCATCCAGTTACGAGATGAGATAAAACCCTGATCCGAGAAGGTTACCTCAAGGAGTTCGTGGGGAACGACAGAAGCAAGAGGCCGCTACCAGCAGACCAAGGCAAGGGTGGTGCCAACCCACCGCTTGAGATTCGAACCATTTTAGGAGGACCCTCAGGAGGAGAGTCGGGAAGGAAGCGAAAAGCTGCAGTTCGAGAGGCACAACAAGAGCCCGACGGGCAAGGTATGTACTCACTCCATCTTGATGAAAACTCACCAAAGTTAGAGTTTACAGAAAAGGAGGCTACGAGAGTACGTCATCCGCACAACGACGCGCTGGTAGTCGCTCTAACGGTTGCCAACGCAAAGGTCTACCGAATCCTCATTGATGGGGGAAGTTCCGCTGATGTGCTCTCAACTACTGCGTTCGACGCCATGAAGCTGGGGAGTGATCACCTGAAGTCGAGCCTCACGCCGCTGGTAGGTTTTGGCGGAAAAAAGTAAGCTTGAGAGGGAACGTCGAATTACCGGTGACGTTTGGAGAAGGATTGCAGACAGTAACGAGGATGATCAATTTCTTGGTGGTAGATTGCGTCCCGGCATATAACGTCATCTTGGGACGACCCACTCTACATGGGCTCAAGGCTTTGGCTTCAACCTACCACCAAGTCCTGAAGTTCCCAACTGAAGAAGGTGTAGGAGCAGTGTACGGCGAGCAGAAAATGTCAAGGGAATGCTACTTTATGGCACTCAAGAACATTGACAGAAAGATTCAAGCGACGCCAGCCTCGGGATATGGCCGAGGCCGAGCAGTTGAAGGGGCAAGTTTTCCCCTCCCAATGGAACATTAA

mRNA sequence

ATGTCAATATCAGACCGGCGTCGGGAAGACAGGGGAAAGAGGCACCAGGTCGAAGGAAGAGACCGGAGTCGACCTGAGCACTCCTCGGCCAATGGCCGAGGCCGACCAGAAGCCAAGGAGCTGCAAGGCCGTGCAGAGCCTAAGTCCAGGTTCGACAGGTATACGACACTGACAGCTTCGCTTGAACAGGTCTTGGCCTCAATACAGGACACGAATCTGATGAAACACCCAGAAAAGTTGAGATCAGATCCCGACAGGAGAAACCGAAACAAATATTGCATGTTCCACGGAGATCACGACCATACAACCCGAGAGTGCATCCAAAGCAAGAGGCCGCTACCAGCAGACCAAGGCAAGGGTGGTGCCAACCCACCGCTTGAGATTCGAACCATTTTAGGAGGACCCTCAGGAGGAGAGTCGGGAAGGAAGCGAAAAGCTGCAGTTCGAGAGGCACAACAAGAGCCCGACGGGCAAGGTATGTACTCACTCCATCTTGATGAAAACTCACCAAAGTTAGAGTTTACAGAAAAGGAGGCTACGAGAGTACGTCATCCGCACAACGACGCGCTGGTAGTCGCTCTAACGGTTGCCAACGCAAAGGTCTACCGAATCCTCATTGATGGGGGAAGTTCCGCTGATGTGCTCTCAACTACTGCGTTCGACGCCATGAAGCTGGGGAGTGATCACCTGAAGTCGAGCCTCACGCCGCTGACAGTAACGAGGATGATCAATTTCTTGGTGGTAGATTGCGTCCCGGCATATAACGTCATCTTGGGACGACCCACTCTACATGGGCTCAAGGCTTTGGCTTCAACCTACCACCAAGTCCTGAAGTTCCCAACTGAAGAAGGTGTAGGAGCAGTGTACGGCGAGCAGAAAATGTCAAGGGAATGCTACTTTATGGCACTCAAGAACATTGACAGAAAGATTCAAGCGACGCCAGCCTCGGGATATGGCCGAGGCCGAGCAGTTGAAGGGGCAAGTTTTCCCCTCCCAATGGAACATTAA

Coding sequence (CDS)

ATGTCAATATCAGACCGGCGTCGGGAAGACAGGGGAAAGAGGCACCAGGTCGAAGGAAGAGACCGGAGTCGACCTGAGCACTCCTCGGCCAATGGCCGAGGCCGACCAGAAGCCAAGGAGCTGCAAGGCCGTGCAGAGCCTAAGTCCAGGTTCGACAGGTATACGACACTGACAGCTTCGCTTGAACAGGTCTTGGCCTCAATACAGGACACGAATCTGATGAAACACCCAGAAAAGTTGAGATCAGATCCCGACAGGAGAAACCGAAACAAATATTGCATGTTCCACGGAGATCACGACCATACAACCCGAGAGTGCATCCAAAGCAAGAGGCCGCTACCAGCAGACCAAGGCAAGGGTGGTGCCAACCCACCGCTTGAGATTCGAACCATTTTAGGAGGACCCTCAGGAGGAGAGTCGGGAAGGAAGCGAAAAGCTGCAGTTCGAGAGGCACAACAAGAGCCCGACGGGCAAGGTATGTACTCACTCCATCTTGATGAAAACTCACCAAAGTTAGAGTTTACAGAAAAGGAGGCTACGAGAGTACGTCATCCGCACAACGACGCGCTGGTAGTCGCTCTAACGGTTGCCAACGCAAAGGTCTACCGAATCCTCATTGATGGGGGAAGTTCCGCTGATGTGCTCTCAACTACTGCGTTCGACGCCATGAAGCTGGGGAGTGATCACCTGAAGTCGAGCCTCACGCCGCTGACAGTAACGAGGATGATCAATTTCTTGGTGGTAGATTGCGTCCCGGCATATAACGTCATCTTGGGACGACCCACTCTACATGGGCTCAAGGCTTTGGCTTCAACCTACCACCAAGTCCTGAAGTTCCCAACTGAAGAAGGTGTAGGAGCAGTGTACGGCGAGCAGAAAATGTCAAGGGAATGCTACTTTATGGCACTCAAGAACATTGACAGAAAGATTCAAGCGACGCCAGCCTCGGGATATGGCCGAGGCCGAGCAGTTGAAGGGGCAAGTTTTCCCCTCCCAATGGAACATTAA

Protein sequence

MSISDRRREDRGKRHQVEGRDRSRPEHSSANGRGRPEAKELQGRAEPKSRFDRYTTLTASLEQVLASIQDTNLMKHPEKLRSDPDRRNRNKYCMFHGDHDHTTRECIQSKRPLPADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQQEPDGQGMYSLHLDENSPKLEFTEKEATRVRHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDAMKLGSDHLKSSLTPLTVTRMINFLVVDCVPAYNVILGRPTLHGLKALASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNIDRKIQATPASGYGRGRAVEGASFPLPMEH
Homology
BLAST of Lag0034980 vs. NCBI nr
Match: XP_022150028.1 (uncharacterized protein LOC111018300 [Momordica charantia])

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-54
Identity = 125/301 (41.53%), Postives = 178/301 (59.14%), Query Frame = 0

Query: 61  LEQVLASIQDTNLMKHPEKLRSDPDRRNRNKYCMFHGDHDHTTRECIQSKR--------- 120
           LEQVL  I+   L++ PE++ +   +R++ +YC+FH DHDH T++C   K+         
Sbjct: 4   LEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQRG 63

Query: 121 --------PLPADQGKGGA-NPPLEIRTILGGPSGGESGRKRKAAVREAQQEPDGQGMYS 180
                   P     G+  + +P  EIRTI+GGP   E GRKRKA++RE +       +Y 
Sbjct: 64  YLKEYVEDPKATQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIRETRTSQVQHEIYH 123

Query: 181 LHLDENSPKLEFTEKEATRVRHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDA 240
             + +   K+EF+E EAT + HPHND LV+ L +ANAKV+RIL+DGGSSAD++S TA+ A
Sbjct: 124 TFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGGSSADIISLTAYKA 183

Query: 241 MKLGSDHLKSS-------------------LT------PLTVTRMINFLVVDCVPAYNVI 300
           M LG    KSS                   LT      P ++T +++FLV+D   +YN I
Sbjct: 184 MDLGERGRKSSPASLVRFRGERVIPEGRTELTVTFGSGPKSITTIMDFLVIDYASSYNAI 243

Query: 301 LGRPTLHGLKALASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNIDRKIQATPASG 319
           LGRPT+H LKA+ STYHQ + FPT  G+G +  EQ++SRECY+ ++K  DR   A+ A G
Sbjct: 244 LGRPTIHMLKAIPSTYHQSINFPTHGGIGEIKEEQRVSRECYYTSMKGNDR---ASTAGG 301

BLAST of Lag0034980 vs. NCBI nr
Match: XP_030950020.1 (uncharacterized protein LOC115973918 [Quercus lobata])

HSP 1 Score: 212.2 bits (539), Expect = 6.7e-51
Identity = 136/347 (39.19%), Postives = 193/347 (55.62%), Query Frame = 0

Query: 14  RHQVEGRDRSRPEHSSANGRGRPEAKELQGRAEPKSRFDRYTTLTASLEQVLASIQDTNL 73
           RH  +G   +RP+    + R   E+K    +     R  +YT L A LEQVL  I+D   
Sbjct: 7   RHHEQG---TRPKKGRTDERRDRESK----KPGLPVRNQQYTPLNAPLEQVLMQIKDDPS 66

Query: 74  MKHPEKLRSDPDRRNRNKYCMFHGDHDHTTRECIQSKRPLP--ADQGK------------ 133
           +K PEKL+ DP++RNRNKYC FH DH H T EC   K+ +     QGK            
Sbjct: 67  LKWPEKLKGDPNKRNRNKYCRFHRDHGHNTDECFDLKQQIENLIRQGKLRGFLGRDQRDE 126

Query: 134 -------GGANPPL-EIRTILGGPSGGESGRKRKAAVREAQQ-EPDGQGMYSLHLDENSP 193
                    + PPL EIR I+GG S G S + +KA ++  Q  +  G+   ++ +DE + 
Sbjct: 127 KQKGKMEDSSRPPLGEIRVIIGGSSTGRSSKSKKAYLKVVQNVQLTGRSPRAMSMDEQA- 186

Query: 194 KLEFTEKEATRVRHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDAMKLGSDHL 253
            + FT+++A R+ HPH+DALV++L +AN    R+L+D GSSAD+L   AF  M+LG D L
Sbjct: 187 -ITFTDEDADRIHHPHDDALVISLLIANYTTRRVLVDNGSSADILYYPAFQQMRLGRDQL 246

Query: 254 KSSLTPLT-------------------------VTRMINFLVVDCVPAYNVILGRPTLHG 313
           +   +PL                          +T+ +NFLVVDC  +YN I+GRPTL+ 
Sbjct: 247 RPVNSPLVGFGGMKVQPVGTISLSVVVGAYPQQLTKDVNFLVVDCPSSYNAIIGRPTLNS 306

BLAST of Lag0034980 vs. NCBI nr
Match: XP_023916366.1 (uncharacterized protein LOC112027956 [Quercus suber])

HSP 1 Score: 210.3 bits (534), Expect = 2.6e-50
Identity = 135/350 (38.57%), Postives = 191/350 (54.57%), Query Frame = 0

Query: 11  RGKRHQVEGRDRSRPEHSSANGRGR-PEAKELQGRAEPKSRFDRYTTLTASLEQVLASIQ 70
           R +  +VE     + E      +GR  + K+   +A P +R  +YT L   LEQVL  I+
Sbjct: 317 RKRLERVEANPMRQSEQGPRPKKGRTKDRKDRDKKAGPSARNQQYTPLNMPLEQVLMQIK 376

Query: 71  DTNLMKHPEKLRSDPDRRNRNKYCMFHGDHDHTTRECIQSKRPLP--ADQGK-------- 130
           D   +K PEK+R DP++RNR+KYC FH DH H T EC   K+ +     QGK        
Sbjct: 377 DEPSLKWPEKMRGDPNKRNRSKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLKNFLGRD 436

Query: 131 -----------GGANPPL-EIRTILGGPSGGESGRKRKAAVREAQQ-EPDGQGMYSLHLD 190
                        + PPL EIR I+GG S G+S   +KA ++E Q  +  G+   +   D
Sbjct: 437 HKDEKLKGKIEESSRPPLGEIRVIIGGSSAGQSSETKKAYLKEVQSVQLFGRSPRARSTD 496

Query: 191 ENSPKLEFTEKEATRVRHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDAMKLG 250
           E +  + FT+KEA R+ HPH+DA+V+AL +A+    R+L+D GSSAD+L   AF  M++G
Sbjct: 497 EQT--ITFTDKEAERIHHPHDDAIVIALLIADYTTRRVLVDNGSSADILYYPAFQQMRVG 556

Query: 251 SDHLKSSLTPLT-------------------------VTRMINFLVVDCVPAYNVILGRP 310
            + L+   +PL                          +T  +NFLVVDC  +YN I+GRP
Sbjct: 557 RNQLRPVHSPLVGFGGMKVQPVGTVTLPVVVGAYPRQLTTDVNFLVVDCSSSYNAIIGRP 616

Query: 311 TLHGLKALASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNIDRKIQ 312
           TL+  KA+ STYH  +KFPTE+GVG V G+Q  +RECY +A+   D + Q
Sbjct: 617 TLNRWKAVTSTYHLSIKFPTEQGVGEVQGDQLAARECY-LAMLAADEQFQ 663

BLAST of Lag0034980 vs. NCBI nr
Match: XP_030936700.1 (uncharacterized protein LOC115961955 [Quercus lobata])

HSP 1 Score: 209.5 bits (532), Expect = 4.4e-50
Identity = 138/351 (39.32%), Postives = 190/351 (54.13%), Query Frame = 0

Query: 13  KRHQVEGRDRSRPEHSSAN---GRGRPEAKELQGR-AEPKSRFDRYTTLTASLEQVLASI 72
           KR ++E  D +   HS       +GR E K+ + R A P  R  +YT L   L+QVL  I
Sbjct: 52  KRKKIEKMDANPTRHSEQGPHLKKGRTEDKKDRDRKAGPSVRSQQYTPLNMPLDQVLMQI 111

Query: 73  QDTNLMKHPEKLRSDPDRRNRNKYCMFHGDHDHTTRECIQSKRPLP--ADQGK------- 132
           +D   +K PEK++ DP++RNRNKYC FH DH H T EC   K+ +     QGK       
Sbjct: 112 KDDPSLKWPEKMKGDPNKRNRNKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLRSFLGR 171

Query: 133 ------------GGANPPL-EIRTILGGPSGGESGRKRKAAVREAQQ-EPDGQGMYSLHL 192
                         + PPL EIR I+GG S  +S R RK  ++  Q  +  G+       
Sbjct: 172 DHKDEKLKGKAEESSRPPLGEIRVIVGGSSTVQSSRSRKTYLKVVQSVQLSGRPPRDRDT 231

Query: 193 DENSPKLEFTEKEATRVRHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDAMKL 252
           DE +  + FTE+EA R+ HPH+DA+V+ L +A+    R+L+D GSSAD+L   AF  MKL
Sbjct: 232 DEQA--ITFTEEEAKRIHHPHDDAIVITLLIADYTTRRVLVDNGSSADILYLPAFQQMKL 291

Query: 253 GSDHLKSSLTPLT-------------------------VTRMINFLVVDCVPAYNVILGR 312
           G D L+   +PL                          VT+ ++FLVVDC  +YN I+GR
Sbjct: 292 GRDRLRPVNSPLVGFGGMKVQPVGIVTLPVVVGAYPQQVTKDVSFLVVDCSSSYNAIIGR 351

BLAST of Lag0034980 vs. NCBI nr
Match: XP_022155902.1 (uncharacterized protein LOC111022905 [Momordica charantia])

HSP 1 Score: 209.1 bits (531), Expect = 5.7e-50
Identity = 112/264 (42.42%), Postives = 158/264 (59.85%), Query Frame = 0

Query: 80  LRSDPDRRNRNKYCMFHGDHDHTTRECIQSKR-----------------PLPADQGKGGA 139
           +++   +R++ +Y +FH DH H T++C   K                  P     G+   
Sbjct: 1   MKAPSTKRSKGRYWLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKVTQNGENDK 60

Query: 140 NPPLEIRTILGGPSGGESGRKRKAAVREAQQEPDGQGMYSLHLDENSPKLEFTEKEATRV 199
           +P  EI+TI+GGP   ESGRK K  VREA+       +Y  ++ + S  +EF++ EAT +
Sbjct: 61  SPAREIQTIMGGPIESESGRKIKVDVREARTNLGHNEVYYTYIADRSATIEFSKDEATHL 120

Query: 200 RHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDAMKLGSDHLKSSLTPL----- 259
            HPHNDALV+ L +AN KV+RIL+DGG+SAD++S TA+  M +G   LKS+ TPL     
Sbjct: 121 LHPHNDALVITLKIANVKVHRILVDGGNSADIISWTAYKVMDVGEKVLKSNPTPLVILEG 180

Query: 260 -------------TVTRMINFLVVDCVPAYNVILGRPTLHGLKALASTYHQVLKFPTEEG 309
                        +VT+M+ FLVVD   +YN ILGR T+H LKA+ STYHQ +KFPT  G
Sbjct: 181 RIESPVTFGSGPKSVTKMVEFLVVDYKSSYNAILGRLTMHMLKAIPSTYHQSMKFPTPGG 240

BLAST of Lag0034980 vs. ExPASy TrEMBL
Match: A0A6J1D8C9 (uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018300 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 6.4e-55
Identity = 125/301 (41.53%), Postives = 178/301 (59.14%), Query Frame = 0

Query: 61  LEQVLASIQDTNLMKHPEKLRSDPDRRNRNKYCMFHGDHDHTTRECIQSKR--------- 120
           LEQVL  I+   L++ PE++ +   +R++ +YC+FH DHDH T++C   K+         
Sbjct: 4   LEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQRG 63

Query: 121 --------PLPADQGKGGA-NPPLEIRTILGGPSGGESGRKRKAAVREAQQEPDGQGMYS 180
                   P     G+  + +P  EIRTI+GGP   E GRKRKA++RE +       +Y 
Sbjct: 64  YLKEYVEDPKATQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIRETRTSQVQHEIYH 123

Query: 181 LHLDENSPKLEFTEKEATRVRHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDA 240
             + +   K+EF+E EAT + HPHND LV+ L +ANAKV+RIL+DGGSSAD++S TA+ A
Sbjct: 124 TFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGGSSADIISLTAYKA 183

Query: 241 MKLGSDHLKSS-------------------LT------PLTVTRMINFLVVDCVPAYNVI 300
           M LG    KSS                   LT      P ++T +++FLV+D   +YN I
Sbjct: 184 MDLGERGRKSSPASLVRFRGERVIPEGRTELTVTFGSGPKSITTIMDFLVIDYASSYNAI 243

Query: 301 LGRPTLHGLKALASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNIDRKIQATPASG 319
           LGRPT+H LKA+ STYHQ + FPT  G+G +  EQ++SRECY+ ++K  DR   A+ A G
Sbjct: 244 LGRPTIHMLKAIPSTYHQSINFPTHGGIGEIKEEQRVSRECYYTSMKGNDR---ASTAGG 301

BLAST of Lag0034980 vs. ExPASy TrEMBL
Match: A0A6J1DQL9 (uncharacterized protein LOC111022905 OS=Momordica charantia OX=3673 GN=LOC111022905 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.8e-50
Identity = 112/264 (42.42%), Postives = 158/264 (59.85%), Query Frame = 0

Query: 80  LRSDPDRRNRNKYCMFHGDHDHTTRECIQSKR-----------------PLPADQGKGGA 139
           +++   +R++ +Y +FH DH H T++C   K                  P     G+   
Sbjct: 1   MKAPSTKRSKGRYWLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKVTQNGENDK 60

Query: 140 NPPLEIRTILGGPSGGESGRKRKAAVREAQQEPDGQGMYSLHLDENSPKLEFTEKEATRV 199
           +P  EI+TI+GGP   ESGRK K  VREA+       +Y  ++ + S  +EF++ EAT +
Sbjct: 61  SPAREIQTIMGGPIESESGRKIKVDVREARTNLGHNEVYYTYIADRSATIEFSKDEATHL 120

Query: 200 RHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDAMKLGSDHLKSSLTPL----- 259
            HPHNDALV+ L +AN KV+RIL+DGG+SAD++S TA+  M +G   LKS+ TPL     
Sbjct: 121 LHPHNDALVITLKIANVKVHRILVDGGNSADIISWTAYKVMDVGEKVLKSNPTPLVILEG 180

Query: 260 -------------TVTRMINFLVVDCVPAYNVILGRPTLHGLKALASTYHQVLKFPTEEG 309
                        +VT+M+ FLVVD   +YN ILGR T+H LKA+ STYHQ +KFPT  G
Sbjct: 181 RIESPVTFGSGPKSVTKMVEFLVVDYKSSYNAILGRLTMHMLKAIPSTYHQSMKFPTPGG 240

BLAST of Lag0034980 vs. ExPASy TrEMBL
Match: A0A6J1DRG9 (uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023587 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 8.9e-49
Identity = 113/280 (40.36%), Postives = 161/280 (57.50%), Query Frame = 0

Query: 54  YTTLTASLEQVLASIQDTNLMKHPEKLRSDPDRRNRNKYCMFHGDHDHTTRECIQSKRPL 113
           YT  T  LEQVL  I+D  L+K PE++++   +R++ +YC+FH DHDH T++C   K  +
Sbjct: 2   YTLTTIPLEQVLMEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHDHATQDCFDLKEEV 61

Query: 114 PADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQQEPDGQGMYSLHLDENSPKLE 173
                +G                      K+KA VREA+   +   +Y  ++ +    +E
Sbjct: 62  EGLIRRGYLKEE-------------RIWEKKKADVREARANREQNEVYHAYITDRPVTIE 121

Query: 174 FTEKEATRVRHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDAMKLGSDHLKSS 233
           F+E EAT++ H HNDALV+ L +AN KV+RIL+DGGSSAD++S TA+ AM L    LKSS
Sbjct: 122 FSEDEATQLFHSHNDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLEEKVLKSS 181

Query: 234 LTPLT-------------------------VTRMINFLVVDCVPAYNVILGRPTLHGLKA 293
             PL                          VT+M++FLVV+   +YN ILGR T+H LK 
Sbjct: 182 PAPLVGFGGERVISEGRIELPVTFGSGPKGVTKMVDFLVVNYTSSYNEILGRLTMHMLKV 241

Query: 294 LASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNIDR 309
           + STYHQ +KFPT  GV  + GEQ++SRECY+ +++  DR
Sbjct: 242 IPSTYHQSMKFPTPGGVXEIKGEQRVSRECYYTSMRGNDR 268

BLAST of Lag0034980 vs. ExPASy TrEMBL
Match: A0A6J1DV51 (uncharacterized protein LOC111024662 OS=Momordica charantia OX=3673 GN=LOC111024662 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 109/277 (39.35%), Postives = 160/277 (57.76%), Query Frame = 0

Query: 80  LRSDPDRRNRNKYCMFHGDHDHTTRECIQSKRPLPADQGKG------------------G 139
           +++ P++R++ +YC+FH DH H T++C   K  +     +G                   
Sbjct: 1   MKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDD 60

Query: 140 ANPPLEIRTILGGPSGGESGRKRKAAVREAQQEPDGQGMYSLHLDENSPKLEFTEKEATR 199
            +P  EI+TI GGP+  E G+KRKA+++EA+  P    +Y         K++F+E E TR
Sbjct: 61  KSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTR 120

Query: 200 VRHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDAMKLGSDHLKSSLTPL---- 259
           + HPHNDALV+ L + N KV+RIL+DGGSS  ++S TA+ AM LG   LKS+L PL    
Sbjct: 121 LFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVGFG 180

Query: 260 ---------------------TVTRMINFLVVDCVPAYNVILGRPTLHGLKALASTYHQV 314
                                 +T+++ FLVVD   +YN ILGRPT+H LKA+ STYH+ 
Sbjct: 181 GERVIQKCRIKLPVTFGNGPRNITKIVEFLVVDYSSSYNAILGRPTIHTLKAIPSTYHKS 240

BLAST of Lag0034980 vs. ExPASy TrEMBL
Match: A0A6J1DAK4 (uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018902 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 6.4e-47
Identity = 107/273 (39.19%), Postives = 156/273 (57.14%), Query Frame = 0

Query: 61  LEQVLASIQDTNLMKHPEKLRSDPDRRNRNKYCMFHGDHDHTTRECIQSKRPLPADQGKG 120
           LEQV   I+D  L+K PE++++ P +R + +YC FH DH H T++C   K  +     +G
Sbjct: 4   LEQVFVEIKDQRLLKWPERMKAPPSKRGKGRYCPFHLDHSHATQDCFDLKEEVEGLIQRG 63

Query: 121 GANPPLEIRTILGGPSGGESGRKRKAAVREAQQEPDGQGMYSLHLDENSPKLEFTEKEAT 180
                  ++  +  P   ++ R+R+A             +Y   ++E   K+EF E E T
Sbjct: 64  ------YLKEYVKDPKATQNKRERQA-----------YKIYHAFVEEQPTKIEFLEDEVT 123

Query: 181 RVRHPHNDALVVALTVANAKVYRILIDGGSSADVLSTTAFDAMKLGSDHLKSSLTPL--- 240
            + HPHNDALV+ L +ANAKV+ IL+DGGSS D++S TA+  M LG   LKSS  PL   
Sbjct: 124 HIFHPHNDALVINLKIANAKVHWILVDGGSSPDIISLTAYKTMDLGERGLKSSPAPLVGF 183

Query: 241 ----------------------TVTRMINFLVVDCVPAYNVILGRPTLHGLKALASTYHQ 300
                                 ++T+M++FLVVD   + N ILGRPT+H LKA+ S YHQ
Sbjct: 184 GGEWVIPEGRIELPVTFGSGPKSITKMVDFLVVDYASSCNAILGRPTMHMLKAIPSRYHQ 243

Query: 301 VLKFPTEEGVGAVYGEQKMSRECYFMALKNIDR 309
            +KFPT  G+G + GEQ++SRECY+ ++K  D+
Sbjct: 244 SIKFPTPGGIGEIKGEQRVSRECYYASMKGNDK 259

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150028.11.3e-5441.53uncharacterized protein LOC111018300 [Momordica charantia][more]
XP_030950020.16.7e-5139.19uncharacterized protein LOC115973918 [Quercus lobata][more]
XP_023916366.12.6e-5038.57uncharacterized protein LOC112027956 [Quercus suber][more]
XP_030936700.14.4e-5039.32uncharacterized protein LOC115961955 [Quercus lobata][more]
XP_022155902.15.7e-5042.42uncharacterized protein LOC111022905 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D8C96.4e-5541.53uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DQL92.8e-5042.42uncharacterized protein LOC111022905 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DRG98.9e-4940.36uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DV511.2e-4839.35uncharacterized protein LOC111024662 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DAK46.4e-4739.19uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 198..264
e-value: 1.01297E-7
score: 47.3312

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034980.1Lag0034980.1mRNA