
Lag0034976 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCCCCAGTTTCTACAAATTCACCATTGATGTCACGTGAAGGTCAGGTGAGTCCCTTGGCCAAATTTTGGCATCAACAGTTGGCGCTGTCTGTGGGAAAGAGTGCTGGCCAGTTCAGACCGCGCATCGGCGGTGGTCTGCAGGAGGATCGGGTTCAGAAACCAAAAGAAACCTCGGGTATGAGCAGAAAGCGCCGAACCAGACTGAGGTCGACCTCGGTATGGAAAAGGCCGACCCTAACTTCGGAGATGGTTGTAAGGTTCCGTGTGCCCACGATGCTGTGGACCTAACCCAAGAGGACAACCAGCAGAAGAACTGGAGTCTGTGCCACTAACGTCTGAGGAAATGCTAAGGTCTAAGCAGAAGGAGAGAGAGAGCCGAGAAGTTTCTGTATTCGACCAGCATCGAGAAGTCAGAGGAAAAGGACGCCAGGTAGAAGATGGAGGCCAGATCCGACATGAGCACTCCTCGGTCGATGATCGAGGTCGAGCAGAAGCCCAATCGCACACAGGGAATAATGACAGGAAAAAGTCAGAGGCTCGGGCAAAGTCTGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCCATCCAAATGGCTAAAAGACGAAGCGACAAGGTGTCGAGCCTTCGCACTAACACCCACAGGTTTGGCAAGGCAATGGTTTAGTAAGATCCCACGGAAGTCAATCGGTTCGTTTAAAGAATTGGCCCGAGCGTTTGTTACGCAATTCCTCGGGGCCTGGAGCCGACAGAAGCCTCAGATCAATTTGCTAACAGTAAAGCAGGGGCCCCTGAGAAAGCTTGAAGGATTATATTAACAGATTTAGTAACGAAGTTTTGCAGGTAGAAGGCTATACGATGGATTTGCCTTGATTGCTGTGATTTCAGGTCTACAGGATGAAAGACTGCTCAACTCGATCGGTGAGAGACAGCCACGAACATACACAGAATTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTACTGAGGTCCAAACAAGAAGAGAAAGAGGCCGAAGCCGACAAGAGCAGTCCTCGGCCAATGGCTGAGGCCGACCAGAGACCAGGGAGCCTCGGGGTCGTGCAGAACCAAAAACCAGGTTTGACAGGTGTACACCACTACCAACTCCACTTGAACAGGCCCTAGCCACAATACAGGTACAAACCTAATGAAGTGCCCAGAAAAGTTGAGGTCGGACCCAGACAGGAGAAATTAGAACAAGTACTGCACGTTCCACGGAGACCACGATCACACAACCCGGATAGAAGCCCAATCCGAGAGGGTTACCTCAAGGAGTTTGTGGTGGAATGACAGAAGCTAGAGGCCATTACCAGCAGGTCAAGGTAAAGGCGGTGTCAACCCACCGCTCGAGTTACGTACAATTTTAGGAGGACCATCCGGTGGAGAGTCAGACAGAAAGTGA ATGTCTTCCCCAGTTTCTACAAATTCACCATTGATGTCACGTGAAGGTCAGGTGAGTCCCTTGGCCAAATTTTGGCATCAACAGTTGGCGCTGTCTGTGGGAAAGAGTGCTGGCCAGTTCAGACCGCGCATCGGCGGTGGTCTGCAGGAGGATCGGGTTCAGAAACCAAAAGAAACCTCGGGTTCCGTGTGCCCACGATGCTGTGGACCTAACCCAAGAGGACAACCAGCAGAAGAACTGGAGTCTGTGCCACTAACGTCTGAGGAAATGCTAAGGTCTAAGCAGAAGGAGAGAGAGAGCCGAGAAGTTTCTGTATTCGACCAGCATCGAGAAGTCAGAGGAAAAGGACGCCAGGTAGAAGATGGAGGCCAGATCCGACATGAGCACTCCTCGGTCGATGATCGAGGTCGAGCAGAAGCCCAATCGCACACAGGGAATAATGACAGGAAAAAGTCAGAGGCTCGGGCAAAGTCTGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCCATCCAAATGGCTAAAAGACGAAGCGACAAGGTGTCGAGCCTTCGCACTAACACCCACAGGTTTGGCAAGGCAATGGTTTAGTAAGATCCCACGGAAGTCAATCGGTAGAAGGCTATACGATGGATTTGCCTTGATTGCTGTGATTTCAGGTCTACAGGATGAAAGACTGCTCAACTCGATCGGTGAGAGACAGCCACGAACATACACAGAATTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTACTGAGGTCCAAACAAGAAGAGAAAGAGGCCGAAGCCGACAAGAGCAGTCCTCGGCCAATGGCTGAGGCCGACCAGAGACCAGGGAGCCTCGGGGTCGTGCAGAACCAAAAACCAGGTCAAGGTAAAGGCGGTGTCAACCCACCGCTCGAGTTACGTACAATTTTAGGAGGACCATCCGGTGGAGAGTCAGACAGAAAGTGA ATGTCTTCCCCAGTTTCTACAAATTCACCATTGATGTCACGTGAAGGTCAGGTGAGTCCCTTGGCCAAATTTTGGCATCAACAGTTGGCGCTGTCTGTGGGAAAGAGTGCTGGCCAGTTCAGACCGCGCATCGGCGGTGGTCTGCAGGAGGATCGGGTTCAGAAACCAAAAGAAACCTCGGGTTCCGTGTGCCCACGATGCTGTGGACCTAACCCAAGAGGACAACCAGCAGAAGAACTGGAGTCTGTGCCACTAACGTCTGAGGAAATGCTAAGGTCTAAGCAGAAGGAGAGAGAGAGCCGAGAAGTTTCTGTATTCGACCAGCATCGAGAAGTCAGAGGAAAAGGACGCCAGGTAGAAGATGGAGGCCAGATCCGACATGAGCACTCCTCGGTCGATGATCGAGGTCGAGCAGAAGCCCAATCGCACACAGGGAATAATGACAGGAAAAAGTCAGAGGCTCGGGCAAAGTCTGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCCATCCAAATGGCTAAAAGACGAAGCGACAAGGTGTCGAGCCTTCGCACTAACACCCACAGGTTTGGCAAGGCAATGGTTTAGTAAGATCCCACGGAAGTCAATCGGTAGAAGGCTATACGATGGATTTGCCTTGATTGCTGTGATTTCAGGTCTACAGGATGAAAGACTGCTCAACTCGATCGGTGAGAGACAGCCACGAACATACACAGAATTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTACTGAGGTCCAAACAAGAAGAGAAAGAGGCCGAAGCCGACAAGAGCAGTCCTCGGCCAATGGCTGAGGCCGACCAGAGACCAGGGAGCCTCGGGGTCGTGCAGAACCAAAAACCAGGTCAAGGTAAAGGCGGTGTCAACCCACCGCTCGAGTTACGTACAATTTTAGGAGGACCATCCGGTGGAGAGTCAGACAGAAAGTGA MSSPVSTNSPLMSREGQVSPLAKFWHQQLALSVGKSAGQFRPRIGGGLQEDRVQKPKETSGSVCPRCCGPNPRGQPAEELESVPLTSEEMLRSKQKERESREVSVFDQHREVRGKGRQVEDGGQIRHEHSSVDDRGRAEAQSHTGNNDRKKSEARAKSEAEQGQKGREPSKWLKDEATRCRAFALTPTGLARQWFSKIPRKSIGRRLYDGFALIAVISGLQDERLLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPGSLGVVQNQKPGQGKGGVNPPLELRTILGGPSGGESDRK Homology
BLAST of Lag0034976 vs. NCBI nr
Match: XP_010695575.1 (PREDICTED: uncharacterized protein LOC104908186 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 58.2 bits (139), Expect = 1.5e-04 Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0
BLAST of Lag0034976 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia]) HSP 1 Score: 57.8 bits (138), Expect = 2.0e-04 Identity = 45/158 (28.48%), Postives = 65/158 (41.14%), Query Frame = 0
BLAST of Lag0034976 vs. NCBI nr
Match: XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia]) HSP 1 Score: 57.4 bits (137), Expect = 2.6e-04 Identity = 46/157 (29.30%), Postives = 65/157 (41.40%), Query Frame = 0
BLAST of Lag0034976 vs. ExPASy TrEMBL
Match: A0A2N9E6S3 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2548 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.5e-05 Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of Lag0034976 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 9.8e-05 Identity = 45/158 (28.48%), Postives = 65/158 (41.14%), Query Frame = 0
BLAST of Lag0034976 vs. ExPASy TrEMBL
Match: A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-04 Identity = 46/157 (29.30%), Postives = 65/157 (41.40%), Query Frame = 0
BLAST of Lag0034976 vs. ExPASy TrEMBL
Match: A0A6J1D9E1 (uncharacterized protein LOC111018823 OS=Momordica charantia OX=3673 GN=LOC111018823 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.4e-04 Identity = 39/130 (30.00%), Postives = 63/130 (48.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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