Sequences
The following sequences are available for this feature:
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGCAAAACACAAGAAACACAAAAATGCTTACCTGATACCACAAACTTACTCAAGTTAGCTGAAGGAGAGGCATTACAGGGCCCTGTGAGCAGCAAA TCTCATATCCAGCACCAATTTGATATTGCCCTCTCTTCTTCTTCGATACTGTACCGTTCTTCCTCTCGTTTCTTTCTTTTTGAGTCTCTGCGCAGACCCTCGATGGCAGGAGTCAGCATCTACTGGGCGATGAGGTTGTTCGTGGTGGCTGTGGTGCTTCTACTTGCAGTGGCGAGAGCTCAAGACAGTGGAGGACTTGCACCGTTGCCTGCCATGGATGCTGGGACTGGATTTCAGGTGACGTTTTCCAGTGGCGGGGTTCTGCTATCGATGTTCCTCTGCCTTGTTGCGCTTCTTTGCCATTAG
ATGAGGAGCAAAACACAAGAAACACAAAAATGCTTACCTGATACCACAAACTTACTCAAGTTAGCTGAAGGAGAGGCATTACAGGGCCCTGTGAGCAGCAAATCTCATATCCAGCACCAATTTGATATTGCCCTCTCTTCTTCTTCGATACTGTACCGTTCTTCCTCTCGTTTCTTTCTTTTTGAGTCTCTGCGCAGACCCTCGATGGCAGGAGTCAGCATCTACTGGGCGATGAGGTTGTTCGTGGTGGCTGTGGTGCTTCTACTTGCAGTGGCGAGAGCTCAAGACAGTGGAGGACTTGCACCGTTGCCTGCCATGGATGCTGGGACTGGATTTCAGGTGACGTTTTCCAGTGGCGGGGTTCTGCTATCGATGTTCCTCTGCCTTGTTGCGCTTCTTTGCCATTAG
ATGAGGAGCAAAACACAAGAAACACAAAAATGCTTACCTGATACCACAAACTTACTCAAGTTAGCTGAAGGAGAGGCATTACAGGGCCCTGTGAGCAGCAAATCTCATATCCAGCACCAATTTGATATTGCCCTCTCTTCTTCTTCGATACTGTACCGTTCTTCCTCTCGTTTCTTTCTTTTTGAGTCTCTGCGCAGACCCTCGATGGCAGGAGTCAGCATCTACTGGGCGATGAGGTTGTTCGTGGTGGCTGTGGTGCTTCTACTTGCAGTGGCGAGAGCTCAAGACAGTGGAGGACTTGCACCGTTGCCTGCCATGGATGCTGGGACTGGATTTCAGGTGACGTTTTCCAGTGGCGGGGTTCTGCTATCGATGTTCCTCTGCCTTGTTGCGCTTCTTTGCCATTAG
MRSKTQETQKCLPDTTNLLKLAEGEALQGPVSSKSHIQHQFDIALSSSSILYRSSSRFFLFESLRRPSMAGVSIYWAMRLFVVAVVLLLAVARAQDSGGLAPLPAMDAGTGFQVTFSSGGVLLSMFLCLVALLCH
Homology
BLAST of Lag0034873 vs. NCBI nr
Match:
KAA0059092.1 (hypothetical protein E6C27_scaffold601G00030 [Cucumis melo var. makuwa] >TYK18840.1 hypothetical protein E5676_scaffold204G00320 [Cucumis melo var. makuwa])
HSP 1 Score: 97.4 bits (241), Expect = 9.8e-17
Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of Lag0034873 vs. NCBI nr
Match:
KGN66478.1 (hypothetical protein Csa_007521 [Cucumis sativus])
HSP 1 Score: 94.4 bits (233), Expect = 8.3e-16
Identity = 52/67 (77.61%), Postives = 57/67 (85.07%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAA0059092.1 9.8e-17 80.60 hypothetical protein E6C27_scaffold601G00030 [Cucumis melo var. makuwa] >TYK1884... [more] KGN66478.1 8.3e-16 77.61 hypothetical protein Csa_007521 [Cucumis sativus] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G A G G A G C A A A A C A C A A G A A A C A C A A A A A T G C T T A C C T G A T A C C A C A A A C T T A C T C A A G T T A G C T G A A G G A G A G G C A T T A C A G G G C C C T G T G A G C A G C A A A T C T C A T A T C C A G C A C C A A T T T G A T A T T G C C C T C T C T T C T T C T T C G A T A C T G T A C C G T T C T T C C T C T C G T T T C T T T C T T T T T G A G T C T C T G C G C A G A C C C T C G A T G G C A G G A G T C A G C A T C T A C T G G G C G A T G A G G T T G T T C G T G G T G G C T G T G G T G C T T C T A C T T G C A G T G G C G A G A G C T C A A G A C A G T G G A G G A C T T G C A C C G T T G C C T G C C A T G G A T G C T G G G A C T G G A T T T C A G G T G A C G T T T T C C A G T G G C G G G G T T C T G C T A T C G A T G T T C C T C T G C C T T G T T G C G C T T C T T T G C C A T T A G 50 100 150 200 250 300 350 400 Score = Score = Sequence PTHR33659 PTHR33659:SF10
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PANTHER PTHR33659 PROTEIN, PUTATIVE-RELATED-RELATED coord: 69..135 None No IPR available PANTHER PTHR33659:SF10 SUBFAMILY NOT NAMED coord: 69..135
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
cellular_component
GO:0016021 integral component of membrane
