Lag0034723 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034723
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protochlorophyllide-dependent translocon component 52, chloroplastic
Location	chr3: 10193055 .. 10195393 (-)
RNA-Seq Expression	Lag0034723
Synteny	Lag0034723

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTCACAGAGAAAGCAGATAGAGAAGGAGGCAAACCAATTGAAATAGTTGTGAGAGACTTAAACGCATATGGTTTCATCACTAATCAGGAACTAGGAAATAGCAAGTTTTTTGCACCTTGTGTATTTTACACTTCTTTTAGTCTAAGGTCTAAGGAAAGCAATCCAAAACACCAAGATAATGGAACTCTCTTATCGGCTGAAAACAATACGGTAAGAAATCTAGAAACCTCTTTTACTCATATTTCTTGGTGATAATTTTTTTTTTACTCTCGGCAGTTTCTAGATTTATTTCTCTCCACTGTTGGGGATTCTTCTTTGGTTGTATCAGGTAGCCCCAAACACGTCACAGAGAAAAGCGATGCTGATATTTATGTGTATTCCCGTTAGTCCGGGTCGAAGCAGATTAATATTTGTATCTCTGAGAAATTTTGCCGTAGGGATTAATCGAATTATTCCGAGATGGGTTTTCCACTTGGGACAAAACCTCATCTTAGATTCGGATTTGTATCTTCTTCACGTGGAGGTAATGACTATCATATTTTCAGCACATTGCATAAGTTTTTCGAAGTATAGATCAAACTTTTATAATGGTTGAGTAGTTACTCTCTATGAATGTTCATTATTTCAACTTGCCGATAATATCTGGACGTTCTGGATGGTTCAAAAGTTCAGCGAATTACTCTCAAAGTTCACGGTCATTATATGTGATGGCAAAATACCACTAGTGTACTCGAAGAAAAAATATGTTATGAATGAGCCTCAATCTTAATTTTTTCATTGTTTACTATTTTCTCCATTTTGCATTTCTGTTTTGCTGTTGGAAGAACTTCATGATCACCATTAAAAACATCTCTTATTTTTCACTTAACTGTTCTTGTACAACACCTCGTGAGCCCTGCTTATTAAGCTCAAGTGTTTACACACGAAAAAACAGAAAGTATGAGGTTTTATGAATTCATATTCATCGTATAATTATTTTGAGTACATTTTTACAGGAGAGGAAAATTTTGGATGTCGGTCCTTCAAATTGGCAGAAAGCTTGTTTTGTGCCGACCAAGTCAGACGCCAAAGTGGTAGCCTTCAGAAAGTGGTTGAACAAATATTCAGATGGTCATGTTGATTGGAGAGCCAAGTTCAGCGGCATTCTTCCTCCATCGCCTCCGAAGGAACAGCTGATGGACAGGTAACTCTTTCACGGCTTCAGTATGTTAGATGCAGACTAATTCATTTCAATCCACGAGTTATGAACTCCCATATCAATGAGATCGTAGTTCAGATATGGTGGCCATGATTTACCTGCCTTAGATATAATAATAATGATATCATATGAGAACCATCCTGGGTTGGCCTAGTAGTCAATAAGAACCCTAAGAGAAATATAAACTTAAAAGGGAATGAGTTCAATTCATGATGGCCGCTTACCTGGAATTTAGTATCCTACGGACACTCCCGGATATAAAAATAATAATAATAATATCATATGAGTTTCATGGGTTTAGTTGAAATGCATCTAAGTTAGAGCTTATACTTTGCAAAAGTCTTCCCGACTTAAATGTGGTCTGACATACTTCAGCAGTTCAGCTCAAAAAAAAAAAAAAAAAAGTCTTGCTTTTTAAAATAAAAACTCAGTGAAAATAATGCTTGGATAATTACTTTTTAACCTTTTTCCCTTCGCTTTTCATTGCTTATTTTCACAAATAATCTAACTTATAGAAGTATCTAAGTTTGCACATTTATCTGAATTTCTTTTGAGCACAACCCTAATTATTGTTCAAGTTAAGGGCCAACCTGAGCAAAACTCACTTGGTTAAGGAATGTACTCTTAATCGAGGGATAAGAGGTTTGAATTTCTAACTTCCACGAAACTTTTGCAAATAAATTTGTAATAAAAATAACTTCTGCAAATAATGTGAATTATTTGAAAATCATTCATGCACAGAGCATGTCACCTCCACCTAGTTCCCTTCCTATCATGTTTCTGCATTTTGTTCTGTATTTTATTCTTCATGTTCATCGACACCGATATTTCCATACCTGAAAGAAACTGAAAGTGAGAATCGGGGAACGGTTTCAGGTACTGGTCGCATGTGGTGAACTGCAGCAGTTGTAGTGTGGCATACAAGGGTCTGAATGCACTGGAAGTTGTGTTGCAGGTCATCTCCATTGCTTCACTTGGAATATTTGCAGCAACAAAGCAGAGTTTGGTATTATCAGGAGCTGCTAGAGTTGGGATGGTGGCTATGGCTGTACTCTGCTTTGCTGCTTCAAGGTGGCTTTCTCATTTCATTTACAAAAGCTTCCATTTCCATGATTACAACCATGCCCTTAGGTGA

mRNA sequence

ATGGAATTCACAGAGAAAGCAGATAGAGAAGGAGGCAAACCAATTGAAATAGTTGTGAGAGACTTAAACGCATATGGTTTCATCACTAATCAGGAACTAGGAAATAGCAAGTTTTTTGCACCTTGTGTATTTTACACTTCTTTTAGTCTAAGGTCTAAGGAAAGCAATCCAAAACACCAAGATAATGGAACTCTCTTATCGGCTGAAAACAATACGGTAGCCCCAAACACGTCACAGAGAAAAGCGATGCTGATATTTATGTGTATTCCCGTTAGTCCGGGTCGAAGCAGATTAATATTTGTATCTCTGAGAAATTTTGCCGTAGGGATTAATCGAATTATTCCGAGATGGGTTTTCCACTTGGGACAAAACCTCATCTTAGATTCGGATTTGTATCTTCTTCACGTGGAGGAGAGGAAAATTTTGGATGTCGGTCCTTCAAATTGGCAGAAAGCTTGTTTTGTGCCGACCAAGTCAGACGCCAAAGTGGTAGCCTTCAGAAAGTGGTTGAACAAATATTCAGATGGTCATGTTGATTGGAGAGCCAAGTTCAGCGGCATTCTTCCTCCATCGCCTCCGAAGGAACAGCTGATGGACAGGTACTGGTCGCATGTGGTGAACTGCAGCAGTTGTAGTGTGGCATACAAGGGTCTGAATGCACTGGAAGTTGTGTTGCAGGTCATCTCCATTGCTTCACTTGGAATATTTGCAGCAACAAAGCAGAGTTTGGTATTATCAGGAGCTGCTAGAGTTGGGATGGTGGCTATGGCTGTACTCTGCTTTGCTGCTTCAAGGTGGCTTTCTCATTTCATTTACAAAAGCTTCCATTTCCATGATTACAACCATGCCCTTAGGTGA

Coding sequence (CDS)

ATGGAATTCACAGAGAAAGCAGATAGAGAAGGAGGCAAACCAATTGAAATAGTTGTGAGAGACTTAAACGCATATGGTTTCATCACTAATCAGGAACTAGGAAATAGCAAGTTTTTTGCACCTTGTGTATTTTACACTTCTTTTAGTCTAAGGTCTAAGGAAAGCAATCCAAAACACCAAGATAATGGAACTCTCTTATCGGCTGAAAACAATACGGTAGCCCCAAACACGTCACAGAGAAAAGCGATGCTGATATTTATGTGTATTCCCGTTAGTCCGGGTCGAAGCAGATTAATATTTGTATCTCTGAGAAATTTTGCCGTAGGGATTAATCGAATTATTCCGAGATGGGTTTTCCACTTGGGACAAAACCTCATCTTAGATTCGGATTTGTATCTTCTTCACGTGGAGGAGAGGAAAATTTTGGATGTCGGTCCTTCAAATTGGCAGAAAGCTTGTTTTGTGCCGACCAAGTCAGACGCCAAAGTGGTAGCCTTCAGAAAGTGGTTGAACAAATATTCAGATGGTCATGTTGATTGGAGAGCCAAGTTCAGCGGCATTCTTCCTCCATCGCCTCCGAAGGAACAGCTGATGGACAGGTACTGGTCGCATGTGGTGAACTGCAGCAGTTGTAGTGTGGCATACAAGGGTCTGAATGCACTGGAAGTTGTGTTGCAGGTCATCTCCATTGCTTCACTTGGAATATTTGCAGCAACAAAGCAGAGTTTGGTATTATCAGGAGCTGCTAGAGTTGGGATGGTGGCTATGGCTGTACTCTGCTTTGCTGCTTCAAGGTGGCTTTCTCATTTCATTTACAAAAGCTTCCATTTCCATGATTACAACCATGCCCTTAGGTGA

Protein sequence

MEFTEKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGTLLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQNLILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKFSGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSLVLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR

Homology

[Close]

BLAST of Lag0034723 vs. NCBI nr
Match: KAG6588132.1 (Protochlorophyllide-dependent translocon component 52, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 528.5 bits (1360), Expect = 3.6e-146
Identity = 257/285 (90.18%), Postives = 271/285 (95.09%), Query Frame = 0


Query: 1   MEFTEKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQ 60
           MEFTEKADREGGKPIEI V+DL+AYGFI+NQELGNS+FFAPCVFYTSFSLRSK+  PKHQ
Sbjct: 1   MEFTEKADREGGKPIEIFVKDLDAYGFISNQELGNSQFFAPCVFYTSFSLRSKKRTPKHQ 60

Query: 61  DNGTLLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFH 120
           DNG LLSAENN  APNTSQRKAML+FMCIPVSPGRSRLIFVSLRNFA+GI+RIIPRWVFH
Sbjct: 61  DNGALLSAENNAEAPNTSQRKAMLVFMCIPVSPGRSRLIFVSLRNFAIGIDRIIPRWVFH 120

Query: 121 LGQNLILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDW 180
           +GQNLILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFR+WLNKYSDGHVDW
Sbjct: 121 VGQNLILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRRWLNKYSDGHVDW 180

Query: 181 RAKFSGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATK 240
           R KFSGILPPSPPKEQLMDRYWSHVVNCSSC+ AYKGLNALEVVLQVISIA LG+FAAT 
Sbjct: 181 RGKFSGILPPSPPKEQLMDRYWSHVVNCSSCNGAYKGLNALEVVLQVISIALLGVFAATN 240

Query: 241 QSLVLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
           QSLV S  AR+ MVAMAVLCFAASRWLSHFIYK+FHFHDYNHALR
Sbjct: 241 QSLV-SRTARIVMVAMAVLCFAASRWLSHFIYKNFHFHDYNHALR 284

[Close]

BLAST of Lag0034723 vs. NCBI nr
Match: XP_022967161.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita maxima])

HSP 1 Score: 521.2 bits (1341), Expect = 5.8e-144
Identity = 252/281 (89.68%), Postives = 268/281 (95.37%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EKADREGGKPIEI V+DL+AYGFI+NQELGNS+FFAPCVFYTSFSLRSK+  PKHQDNG 
Sbjct: 269 EKADREGGKPIEIFVKDLDAYGFISNQELGNSQFFAPCVFYTSFSLRSKKRTPKHQDNGA 328

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
           LLSAENN  APNTSQRKAML+FMCIPVSPGRSRLIFVSLRNFA+GI+RIIPRWVFH+GQN
Sbjct: 329 LLSAENNAEAPNTSQRKAMLVFMCIPVSPGRSRLIFVSLRNFAIGIDRIIPRWVFHVGQN 388

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
           LILDSDLYLLH+EERKILDVGPSNWQKACFVPTKSDAKVVAFR+WLNKYSDGHVDWR KF
Sbjct: 389 LILDSDLYLLHLEERKILDVGPSNWQKACFVPTKSDAKVVAFRRWLNKYSDGHVDWRGKF 448

Query: 185 SGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSLV 244
           SGILPPSPPKEQLMDRYWSHVVNCSSC+ AYKGLNALEVVLQVISIA LG+FAAT QSLV
Sbjct: 449 SGILPPSPPKEQLMDRYWSHVVNCSSCNGAYKGLNALEVVLQVISIALLGVFAATNQSLV 508

Query: 245 LSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
            SG AR+ MVAMAVLCFAASRWLSHFIYK+FHFHDYNHA+R
Sbjct: 509 -SGTARIVMVAMAVLCFAASRWLSHFIYKNFHFHDYNHAIR 548

[Close]

BLAST of Lag0034723 vs. NCBI nr
Match: XP_023531366.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143
Identity = 251/281 (89.32%), Postives = 267/281 (95.02%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EKADREGGKPIEI ++DL+AYGFI+NQELGNS+FFAPCVFYTSFSLRSK+  PKHQDNG 
Sbjct: 269 EKADREGGKPIEIFIKDLDAYGFISNQELGNSQFFAPCVFYTSFSLRSKKRTPKHQDNGA 328

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
           LLSAENN  APNTSQRKAML+FMCIPVSPGRSRLIFVSLRNFA+GI+RIIPRWVFH+GQN
Sbjct: 329 LLSAENNAEAPNTSQRKAMLVFMCIPVSPGRSRLIFVSLRNFAIGIDRIIPRWVFHVGQN 388

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
           LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFR+WLNKYSDGHVDWR KF
Sbjct: 389 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRRWLNKYSDGHVDWRGKF 448

Query: 185 SGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSLV 244
           SGILPPSPPKEQLMDRYWSHVVNCSSC+ AYKGLN LEVVLQVISIA LG+FAAT QSLV
Sbjct: 449 SGILPPSPPKEQLMDRYWSHVVNCSSCNGAYKGLNTLEVVLQVISIALLGVFAATNQSLV 508

Query: 245 LSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
            SG AR+ MVAMAVLCFAAS+WLSHFIYK+FHFHDYNHALR
Sbjct: 509 -SGTARIVMVAMAVLCFAASKWLSHFIYKNFHFHDYNHALR 548

[Close]

BLAST of Lag0034723 vs. NCBI nr
Match: XP_022933573.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita moschata])

HSP 1 Score: 519.6 bits (1337), Expect = 1.7e-143
Identity = 252/281 (89.68%), Postives = 267/281 (95.02%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EKADREGGKPIEI ++DL+AYGFI+NQELGNS+FFAPCVFYTSFSLRSK+  PKHQDNG 
Sbjct: 269 EKADREGGKPIEIFIKDLDAYGFISNQELGNSQFFAPCVFYTSFSLRSKKRTPKHQDNGA 328

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
           LLSAENN  APNTSQRKAML+FMCIPVSPGRSRLIFVSLRNFA+GI+RIIPRWVFH+GQN
Sbjct: 329 LLSAENNAEAPNTSQRKAMLVFMCIPVSPGRSRLIFVSLRNFAIGIDRIIPRWVFHVGQN 388

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
           LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFR+WLNKYSDGHVDWR KF
Sbjct: 389 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRRWLNKYSDGHVDWRGKF 448

Query: 185 SGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSLV 244
           SGILPPSPPKEQLMDRYWSHVVNCSSC+ AYKGLNALEVVLQVISIA LG+FAAT QSLV
Sbjct: 449 SGILPPSPPKEQLMDRYWSHVVNCSSCNGAYKGLNALEVVLQVISIALLGVFAATNQSLV 508

Query: 245 LSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
            S  AR+ MVAMAVLCFAASRWLSHFIYK+FHFHDYNHALR
Sbjct: 509 -SRTARIVMVAMAVLCFAASRWLSHFIYKNFHFHDYNHALR 548

[Close]

BLAST of Lag0034723 vs. NCBI nr
Match: XP_038879674.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 508.4 bits (1308), Expect = 3.9e-140
Identity = 251/281 (89.32%), Postives = 265/281 (94.31%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EKADREGGKPI+IVVRDL+  GFITNQELG S+FFAPCVFYTSFSL SK+ +   QDNG 
Sbjct: 266 EKADREGGKPIDIVVRDLDVNGFITNQELGTSQFFAPCVFYTSFSLPSKKRDSNRQDNGA 325

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
           LLS+ENNTVAPNTSQRKAMLIFMCIPV PG+SRLIFVSLRNFAV I+RIIPRWVFH+GQN
Sbjct: 326 LLSSENNTVAPNTSQRKAMLIFMCIPVGPGKSRLIFVSLRNFAVWIDRIIPRWVFHVGQN 385

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
           LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFR+WLNKYSDG VDWR KF
Sbjct: 386 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRRWLNKYSDGQVDWRGKF 445

Query: 185 SGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSLV 244
           SGILPPSPPKEQLMDRYWSHVV+CSSC VAYKGLNALEVVLQVISIASLGIFAATKQSLV
Sbjct: 446 SGILPPSPPKEQLMDRYWSHVVSCSSCRVAYKGLNALEVVLQVISIASLGIFAATKQSLV 505

Query: 245 LSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
            SGAARV MVAMA+LCFAASRWLSH+IYK+FHFHDYNHALR
Sbjct: 506 -SGAARVLMVAMAILCFAASRWLSHYIYKNFHFHDYNHALR 545

[Close]

BLAST of Lag0034723 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 8.2e-93
Identity = 169/281 (60.14%), Postives = 209/281 (74.38%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EK DREGGKP+EI V+ L+  GF + QE G S F APCV+      RS       Q++  
Sbjct: 287 EKIDREGGKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVY------RSSTDPLPEQEHEY 346

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
              A ++  A   S+R+  LIF+CIPVSPGRSRLI+   RNF V I++I+PRWVFH+GQN
Sbjct: 347 PAPAASDKAA--LSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQN 406

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
            ILDSDL+LLHVEERKIL+ GP NWQKACF+PTKSDA VV FR+W NKYS+  VDWR KF
Sbjct: 407 TILDSDLHLLHVEERKILERGPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKF 466

Query: 185 SG-ILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSL 244
              +LPP+PP+EQL DRYWSHV NCSSC  A+K LNALEV+LQ+ S+A +G+ A  KQ+ 
Sbjct: 467 DPFLLPPTPPREQLFDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQT- 526

Query: 245 VLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHAL 285
            +S  AR+ ++  AVL FAAS+WLSHFIYK+FH+HDYNHA+
Sbjct: 527 TMSNVARIAVLVAAVLSFAASKWLSHFIYKTFHYHDYNHAV 558

[Close]

BLAST of Lag0034723 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.6e-22
Identity = 87/300 (29.00%), Postives = 133/300 (44.33%), Query Frame = 0


Query: 9   REGGKPIEIVVRDLNAYGFITNQELGNSK----FFAPCVFYTSFSLRSKESNPKHQDNGT 68
           R+  +P+   +    A+G+ +    GN +    F APC                      
Sbjct: 258 RDRARPLPFKMESSGAWGY-SGSNSGNPRISATFVAPCY--------------------A 317

Query: 69  LLSAENNTVAPNTSQRKAMLIFMC---IPVSPGRSRLIFVSLRNF------AVGINRIIP 128
           L   E +T  P    +K  +I++C   IP++PG++R I  S RNF           +++P
Sbjct: 318 LNKIEIDTKLPIFGDQK-WVIWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKAWWQLVP 377

Query: 129 RWVFHLGQNLILDSDLYLLHVEERKILDVGPSN-------WQKACFVPTKSDAKVVAFRK 188
           RW  H   NL+ D D+ +L  +E+  L     +       + K  F PT++D  V+AFR 
Sbjct: 378 RWYEHWTSNLVYDGDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAFRA 437

Query: 189 WLNKYSDGHVDWRAKFSGILPPSP--PKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQ 248
           WL K+ +   DW    S  + PS    K +++DRY  H + CSSC  AY     L+ V  
Sbjct: 438 WLRKFGNSQPDWFGNPSQEVLPSTVLSKREMLDRYEQHTLKCSSCKGAYNAFQTLQKVFM 497

Query: 249 ---VISIASLGIFAATKQSLVLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHA 284
              V   A+ GI A  +  L+L+ AA V          AA  +  + + K+F F DY HA
Sbjct: 498 GATVAFCATAGIPADVQFRLLLAAAALVS---------AAVAYAFYTLQKNFVFVDYVHA 526

[Close]

BLAST of Lag0034723 vs. ExPASy Swiss-Prot
Match: Q9FYC2 (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.9e-19
Identity = 86/306 (28.10%), Postives = 129/306 (42.16%), Query Frame = 0


Query: 9   REGGKPIEIVVRDLNAYGFITNQELG---NSKFFAPCVFYTSFSLRSKESNPKHQDNGTL 68
           R+  KP+   V     +GF    +      +KF APC       L +K            
Sbjct: 264 RDRAKPLPFKVESSGPWGFQGANDDSPRITAKFVAPCYSMNKIELDAK------------ 323

Query: 69  LSAENNTVAPNTSQRKAMLIFMC---IPVSPGRSRLIFVSLRNF------AVGINRIIPR 128
                    P    +K  +I++C   IP++PG++R I  S RNF           +++PR
Sbjct: 324 --------LPIVGNQK-WVIWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPR 383

Query: 129 WVFHLGQNLILDSDLYLLHVEERKIL---------DVGPSNWQKACFVPTKSDAKVVAFR 188
           W  H   NL+ D D+ +L  +E+  L         DV    + K  F PT++D  V+AFR
Sbjct: 384 WYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVN-KQYTKLTFTPTQADRFVLAFR 443

Query: 189 KWLNKYSDGHVDWRAKFSGILPPSPP-------KEQLMDRYWSHVVNCSSCSVAYKGLNA 248
            WL ++     +W     G  P + P       K Q++DR+  H   CSSC  AY     
Sbjct: 444 NWLRRHGKSQPEW----FGSTPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQI 503

Query: 249 LEVVL---QVISIASLGIFAATKQSLVLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHF 284
           L+  L    V   A+ G+ +  +  LVL+G +         L  AAS +  H   K+F F
Sbjct: 504 LKKFLVGATVFWAATAGVPSDVQIRLVLAGLS---------LISAASAYALHEQEKNFVF 534

[Close]

BLAST of Lag0034723 vs. ExPASy Swiss-Prot
Match: O49931 (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.0e-07
Identity = 56/213 (26.29%), Postives = 87/213 (40.85%), Query Frame = 0


Query: 85  IFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQNLILDSDLYLLHVEERKILDV 144
           +F+C P   G+S LI          + ++ P W FH   + + + D+  L  +   +L  
Sbjct: 332 LFLCRPTGQGKSMLIVRFGATKRSPLIKLFPEWYFHQNASKVFEQDMGFLSSQNEILLK- 391

Query: 145 GPSNWQKACFVPTK--------SDAKVVAFRKWLNK------YSDGHVDW---------- 204
                +K   VPTK        SD  V  +RKW++K      Y  GH             
Sbjct: 392 -----EK---VPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPEEPAVVE 451

Query: 205 ---RAKFSGILPPSPPK--------EQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQ--V 261
                  +G+   SP K          L +RY+ HV++C  CS A K     + VL   V
Sbjct: 452 HAPAGLVAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCSSAIKAFQIWKNVLSGVV 511

[Close]

BLAST of Lag0034723 vs. ExPASy TrEMBL
Match: A0A6J1HR92 (protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466721 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.8e-144
Identity = 252/281 (89.68%), Postives = 268/281 (95.37%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EKADREGGKPIEI V+DL+AYGFI+NQELGNS+FFAPCVFYTSFSLRSK+  PKHQDNG 
Sbjct: 269 EKADREGGKPIEIFVKDLDAYGFISNQELGNSQFFAPCVFYTSFSLRSKKRTPKHQDNGA 328

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
           LLSAENN  APNTSQRKAML+FMCIPVSPGRSRLIFVSLRNFA+GI+RIIPRWVFH+GQN
Sbjct: 329 LLSAENNAEAPNTSQRKAMLVFMCIPVSPGRSRLIFVSLRNFAIGIDRIIPRWVFHVGQN 388

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
           LILDSDLYLLH+EERKILDVGPSNWQKACFVPTKSDAKVVAFR+WLNKYSDGHVDWR KF
Sbjct: 389 LILDSDLYLLHLEERKILDVGPSNWQKACFVPTKSDAKVVAFRRWLNKYSDGHVDWRGKF 448

Query: 185 SGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSLV 244
           SGILPPSPPKEQLMDRYWSHVVNCSSC+ AYKGLNALEVVLQVISIA LG+FAAT QSLV
Sbjct: 449 SGILPPSPPKEQLMDRYWSHVVNCSSCNGAYKGLNALEVVLQVISIALLGVFAATNQSLV 508

Query: 245 LSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
            SG AR+ MVAMAVLCFAASRWLSHFIYK+FHFHDYNHA+R
Sbjct: 509 -SGTARIVMVAMAVLCFAASRWLSHFIYKNFHFHDYNHAIR 548

[Close]

BLAST of Lag0034723 vs. ExPASy TrEMBL
Match: A0A6J1F557 (protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111440957 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 8.1e-144
Identity = 252/281 (89.68%), Postives = 267/281 (95.02%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EKADREGGKPIEI ++DL+AYGFI+NQELGNS+FFAPCVFYTSFSLRSK+  PKHQDNG 
Sbjct: 269 EKADREGGKPIEIFIKDLDAYGFISNQELGNSQFFAPCVFYTSFSLRSKKRTPKHQDNGA 328

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
           LLSAENN  APNTSQRKAML+FMCIPVSPGRSRLIFVSLRNFA+GI+RIIPRWVFH+GQN
Sbjct: 329 LLSAENNAEAPNTSQRKAMLVFMCIPVSPGRSRLIFVSLRNFAIGIDRIIPRWVFHVGQN 388

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
           LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFR+WLNKYSDGHVDWR KF
Sbjct: 389 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRRWLNKYSDGHVDWRGKF 448

Query: 185 SGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSLV 244
           SGILPPSPPKEQLMDRYWSHVVNCSSC+ AYKGLNALEVVLQVISIA LG+FAAT QSLV
Sbjct: 449 SGILPPSPPKEQLMDRYWSHVVNCSSCNGAYKGLNALEVVLQVISIALLGVFAATNQSLV 508

Query: 245 LSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
            S  AR+ MVAMAVLCFAASRWLSHFIYK+FHFHDYNHALR
Sbjct: 509 -SRTARIVMVAMAVLCFAASRWLSHFIYKNFHFHDYNHALR 548

[Close]

BLAST of Lag0034723 vs. ExPASy TrEMBL
Match: A0A5D3CHU0 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00850 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 245/285 (85.96%), Postives = 266/285 (93.33%), Query Frame = 0


Query: 1   MEFTEKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQ 60
           M+FTEKADREGGKPI+IVVRDLN  GFI+NQ+LG+S+FFAPCVF+TSFSL SK++N   Q
Sbjct: 1   MDFTEKADREGGKPIDIVVRDLNINGFISNQDLGSSQFFAPCVFFTSFSLPSKKTNSNRQ 60

Query: 61  DNGTLLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFH 120
           D+G LLS ENN VAPNTSQRKAMLIFMCIPV PG+SRLIFVSLRNFAV I+RIIPRW+FH
Sbjct: 61  DSGALLSGENNAVAPNTSQRKAMLIFMCIPVGPGKSRLIFVSLRNFAVSIDRIIPRWIFH 120

Query: 121 LGQNLILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDW 180
           +GQNLILDSDLYLLH+EERKI DVGPSNWQKACFVPTKSDAKVVAFR+WLN+YSDG VDW
Sbjct: 121 VGQNLILDSDLYLLHIEERKISDVGPSNWQKACFVPTKSDAKVVAFRRWLNRYSDGQVDW 180

Query: 181 RAKFSGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATK 240
           R KF+GILPPSPPKEQLMDRYWSHVVNCSSC VAYKGLNALEV LQVISIASLGIFAATK
Sbjct: 181 RGKFNGILPPSPPKEQLMDRYWSHVVNCSSCKVAYKGLNALEVALQVISIASLGIFAATK 240

Query: 241 QSLVLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
           QS V SGAARV MVAMA+LCFA+SRWLSHFIYK+FHFHDYNHALR
Sbjct: 241 QSSV-SGAARVLMVAMAILCFASSRWLSHFIYKNFHFHDYNHALR 284

[Close]

BLAST of Lag0034723 vs. ExPASy TrEMBL
Match: A0A1S3BQM5 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492435 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.9e-139
Identity = 244/281 (86.83%), Postives = 264/281 (93.95%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EKADREGGKPI+IVVRDLN  GFI+NQ+LG+S+FFAPCVF+TSFSL SK++N   QD+G 
Sbjct: 266 EKADREGGKPIDIVVRDLNINGFISNQDLGSSQFFAPCVFFTSFSLPSKKTNSNRQDSGA 325

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
           LLS ENN VAPNTSQRKAMLIFMCIPV PG+SRLIFVSLRNFAV I+RIIPRW+FH+GQN
Sbjct: 326 LLSGENNAVAPNTSQRKAMLIFMCIPVGPGKSRLIFVSLRNFAVSIDRIIPRWIFHVGQN 385

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
           LILDSDLYLLH+EERKILDVGPSNWQKACFVPTKSDAKVVAFR+WLN+YSDG VDWR KF
Sbjct: 386 LILDSDLYLLHIEERKILDVGPSNWQKACFVPTKSDAKVVAFRRWLNRYSDGQVDWRGKF 445

Query: 185 SGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSLV 244
           +GI PPSPPKEQLMDRYWSHVVNCSSC VAYKGLNALEVVLQVISIASLGIFAATKQSLV
Sbjct: 446 NGIFPPSPPKEQLMDRYWSHVVNCSSCKVAYKGLNALEVVLQVISIASLGIFAATKQSLV 505

Query: 245 LSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
            SGAARV MVAMA+LCFA+SRWLSHFIYK+FHFHDYNHALR
Sbjct: 506 -SGAARVLMVAMAILCFASSRWLSHFIYKNFHFHDYNHALR 545

[Close]

BLAST of Lag0034723 vs. ExPASy TrEMBL
Match: A0A6J1D0M6 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111016497 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 9.0e-135
Identity = 242/284 (85.21%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 4   TEKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLR--SKESNPKHQD 63
           +EKADREGGKPIEIVVRDL+ YGFI+NQ LG+SKFFAPC++Y+SFSL   SKE NPK QD
Sbjct: 271 SEKADREGGKPIEIVVRDLDIYGFISNQTLGSSKFFAPCLYYSSFSLGPISKEKNPKLQD 330

Query: 64  NGTLLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHL 123
           NGTLLSAENNTV PNTSQ+K MLIFMCIPVSPG+SR+IFV  RNFAV ++RIIPRW+FH+
Sbjct: 331 NGTLLSAENNTVTPNTSQKKGMLIFMCIPVSPGKSRVIFVFPRNFAVWMDRIIPRWMFHV 390

Query: 124 GQNLILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWR 183
           GQNLILDSDLYLLHVEERKILD+GP NWQKACFVPTKSDA VVAFR+WLNKYSDGHVDWR
Sbjct: 391 GQNLILDSDLYLLHVEERKILDIGPLNWQKACFVPTKSDAIVVAFRRWLNKYSDGHVDWR 450

Query: 184 AKFSGILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQ 243
            KFSG LPPSPPKEQLMDRYWSHVVNCSSC VA KGLNALEVVLQVISIASLGIFA+TKQ
Sbjct: 451 GKFSGSLPPSPPKEQLMDRYWSHVVNCSSCRVACKGLNALEVVLQVISIASLGIFASTKQ 510

Query: 244 SLVLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHALR 286
           SLV S AAR  MVAMA+LCFAASRWLSH+IYK+FHFHDYNHALR
Sbjct: 511 SLV-SAAARNVMVAMAILCFAASRWLSHYIYKNFHFHDYNHALR 553

[Close]

BLAST of Lag0034723 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like )

HSP 1 Score: 341.7 bits (875), Expect = 5.8e-94
Identity = 169/281 (60.14%), Postives = 209/281 (74.38%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EK DREGGKP+EI V+ L+  GF + QE G S F APCV+      RS       Q++  
Sbjct: 264 EKIDREGGKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVY------RSSTDPLPEQEHEY 323

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
              A ++  A   S+R+  LIF+CIPVSPGRSRLI+   RNF V I++I+PRWVFH+GQN
Sbjct: 324 PAPAASDKAA--LSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQN 383

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
            ILDSDL+LLHVEERKIL+ GP NWQKACF+PTKSDA VV FR+W NKYS+  VDWR KF
Sbjct: 384 TILDSDLHLLHVEERKILERGPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKF 443

Query: 185 SG-ILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSL 244
              +LPP+PP+EQL DRYWSHV NCSSC  A+K LNALEV+LQ+ S+A +G+ A  KQ+ 
Sbjct: 444 DPFLLPPTPPREQLFDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQT- 503

Query: 245 VLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHAL 285
            +S  AR+ ++  AVL FAAS+WLSHFIYK+FH+HDYNHA+
Sbjct: 504 TMSNVARIAVLVAAVLSFAASKWLSHFIYKTFHYHDYNHAV 535

[Close]

BLAST of Lag0034723 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like )

HSP 1 Score: 341.7 bits (875), Expect = 5.8e-94
Identity = 169/281 (60.14%), Postives = 209/281 (74.38%), Query Frame = 0


Query: 5   EKADREGGKPIEIVVRDLNAYGFITNQELGNSKFFAPCVFYTSFSLRSKESNPKHQDNGT 64
           EK DREGGKP+EI V+ L+  GF + QE G S F APCV+      RS       Q++  
Sbjct: 287 EKIDREGGKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVY------RSSTDPLPEQEHEY 346

Query: 65  LLSAENNTVAPNTSQRKAMLIFMCIPVSPGRSRLIFVSLRNFAVGINRIIPRWVFHLGQN 124
              A ++  A   S+R+  LIF+CIPVSPGRSRLI+   RNF V I++I+PRWVFH+GQN
Sbjct: 347 PAPAASDKAA--LSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQN 406

Query: 125 LILDSDLYLLHVEERKILDVGPSNWQKACFVPTKSDAKVVAFRKWLNKYSDGHVDWRAKF 184
            ILDSDL+LLHVEERKIL+ GP NWQKACF+PTKSDA VV FR+W NKYS+  VDWR KF
Sbjct: 407 TILDSDLHLLHVEERKILERGPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKF 466

Query: 185 SG-ILPPSPPKEQLMDRYWSHVVNCSSCSVAYKGLNALEVVLQVISIASLGIFAATKQSL 244
              +LPP+PP+EQL DRYWSHV NCSSC  A+K LNALEV+LQ+ S+A +G+ A  KQ+ 
Sbjct: 467 DPFLLPPTPPREQLFDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQT- 526

Query: 245 VLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHFHDYNHAL 285
            +S  AR+ ++  AVL FAAS+WLSHFIYK+FH+HDYNHA+
Sbjct: 527 TMSNVARIAVLVAAVLSFAASKWLSHFIYKTFHYHDYNHAV 558

[Close]

BLAST of Lag0034723 vs. TAIR 10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 95.9 bits (237), Expect = 5.6e-20
Identity = 86/306 (28.10%), Postives = 129/306 (42.16%), Query Frame = 0


Query: 9   REGGKPIEIVVRDLNAYGFITNQELG---NSKFFAPCVFYTSFSLRSKESNPKHQDNGTL 68
           R+  KP+   V     +GF    +      +KF APC       L +K            
Sbjct: 264 RDRAKPLPFKVESSGPWGFQGANDDSPRITAKFVAPCYSMNKIELDAK------------ 323

Query: 69  LSAENNTVAPNTSQRKAMLIFMC---IPVSPGRSRLIFVSLRNF------AVGINRIIPR 128
                    P    +K  +I++C   IP++PG++R I  S RNF           +++PR
Sbjct: 324 --------LPIVGNQK-WVIWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPR 383

Query: 129 WVFHLGQNLILDSDLYLLHVEERKIL---------DVGPSNWQKACFVPTKSDAKVVAFR 188
           W  H   NL+ D D+ +L  +E+  L         DV    + K  F PT++D  V+AFR
Sbjct: 384 WYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVN-KQYTKLTFTPTQADRFVLAFR 443

Query: 189 KWLNKYSDGHVDWRAKFSGILPPSPP-------KEQLMDRYWSHVVNCSSCSVAYKGLNA 248
            WL ++     +W     G  P + P       K Q++DR+  H   CSSC  AY     
Sbjct: 444 NWLRRHGKSQPEW----FGSTPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQI 503

Query: 249 LEVVL---QVISIASLGIFAATKQSLVLSGAARVGMVAMAVLCFAASRWLSHFIYKSFHF 284
           L+  L    V   A+ G+ +  +  LVL+G +         L  AAS +  H   K+F F
Sbjct: 504 LKKFLVGATVFWAATAGVPSDVQIRLVLAGLS---------LISAASAYALHEQEKNFVF 534

The following BLAST results are available for this feature:

BLAST of Lag0034723 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588132.1	3.6e-146	90.18	Protochlorophyllide-dependent translocon component 52, chloroplastic, partial [C...	[more]
XP_022967161.1	5.8e-144	89.68	protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ...	[more]
XP_023531366.1	1.3e-143	89.32	protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ...	[more]
XP_022933573.1	1.7e-143	89.68	protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ...	[more]
XP_038879674.1	3.9e-140	89.32	protochlorophyllide-dependent translocon component 52, chloroplastic-like [Benin...	[more]

BLAST of Lag0034723 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W496	8.2e-93	60.14	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop...	[more]
Q0DV66	7.6e-22	29.00	Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9FYC2	7.9e-19	28.10	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P...	[more]
O49931	4.0e-07	26.29	Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1	[more]

BLAST of Lag0034723 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HR92	2.8e-144	89.68	protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbit...	[more]
A0A6J1F557	8.1e-144	89.68	protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbit...	[more]
A0A5D3CHU0	1.2e-139	85.96	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A1S3BQM5	7.9e-139	86.83	protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc...	[more]
A0A6J1D0M6	9.0e-135	85.21	protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Mom...	[more]

BLAST of Lag0034723 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25650.1	5.8e-94	60.14	ACD1-like	[more]
AT4G25650.2	5.8e-94	60.14	ACD1-like	[more]
AT3G44880.1	5.6e-20	28.10	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013626	Pheophorbide a oxygenase	PFAM	PF08417	PaO	coord: 38..145 e-value: 2.1E-24 score: 85.4
None	No IPR available	GENE3D	3.90.380.10		coord: 30..178 e-value: 3.7E-5 score: 25.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..72
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 5..284
None	No IPR available	PANTHER	PTHR21266:SF45	SUBFAMILY NOT NAMED	coord: 5..284
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 69..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034723.1	Lag0034723.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0046872	metal ion binding