Lag0034665 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034665
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibosomal protein
Locationchr3: 9574340 .. 9581370 (+)
RNA-Seq ExpressionLag0034665
SyntenyLag0034665
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCACGCCGGCGAGTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCGCTGTCTTCGTCGAGCAGCCCTCCAGTCGCGCCAGTTTCGTTCTCCATCTCCCTCTCGGTTTTGTGCAAAGCGATTCGCATCAGATCCACGCATTTTTTCCTTTCGTCGTCTTCTTTCCTTGCCCAAAGCGGCCGCGAGCAGCCCAACCCATCCTAATGTGGTATTGCATTTTTTTTTTCGGATTGTTGGTAATGCCCATAACTTGAAATCTTGTTTCTTTTATTTCTTTTTGTGTGTGTTTAACAATATTCCTTAATCGATAGAAAATAGTGTATTTATGTACATTCATGTAACTGGAGCTAAATAAGAACAAGAAATTAGTGAAGAAGCTTGCCAAAAATTACCATGCCTTTTTGGCATCTAAAGCTGTCATCAAGTAACTGATCCCTCGTCTTCTAGGCCCTGGTCTTAACAAAGCAGATAAGTTCCCAACATTGGTGACACACCAAGAATTGCTTGAATCCAAAGTGAATGAGACCAAGGCAATGGTCAAGTTTCAATTGAAGAAGGTTCTTTGCATGGGAGTTGTCGTGGGAAATGTTGACATGGAGGAGAAGCAAGTTTTCCAAAATGTGCAAATGAGCATCAACTTCCTGGTTTCTTTGTTGAAAAAGAGCTGTCAGAACGTTAGGTGCCTGTACCTAAAGAGCATAATGGGCAAGTCGTACTAGGTTTTCTAAGCTCTGTTAGCAATCTAGTTAGTCTTGTGTTGAATCTTTTTACTGTTGAAGTTATTCTTTGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGAATGATCGTTGAATGAAGAAACATGAATGTATTTTTCTACTTTAAAGTGACTATTGATAATGAACTTTTTGTTCCCATAAAAAAAACTAAGTCTACGAATTCAATGGAATCTTAAAATCTTAAAATGGAAAGCAGAAGCAATTTAATTCATCTTAATTAAAATACTTGGTATCTCTATCCATCTTAATTCATGTTTTCTCTTCCCTAATTCATTCGACTTTTTCGTTTTCCTTTCATGAGGATTCTGTTTGCGGTTTAAGCTTCATGTTTTTACTTCCCTGAAGTTCCATGTGAAAATTTTGCTTTTGAGTAGTCGACTTTCTAATTACTGTGTTTATTTCCTTCAATTATGTTCTACTAATGGATGTCTAGGACATAATGGCGTATTTATGGATTCTCTTGCAAAGCTCTGCTTAGATTTTTTTTGGCGGGTTCAATAATTGAACAAAAAGGATTGGATTGTATCCTGGATTTCTTTCTCCCCAACTTTTTCCCTCTCATGTAAATATGTTTGATTTCTGTTTATAGCATACTTGATTTGCTGCCTTTGGGGTGGAGAGGGTTGGATTTATTTTCGTTTCCCTTAGATCTCTTAGCCAATCATTGATATGCTTCTCTATAGGTTTTTCCCCATTTGAATGTCGTTGATGCTATTTTATCCTTTCTTAAATGTAACTGGATGTTCTGTGAACTTTTCTTCCCCCTTCATATTTTGATACAGTATTGTGTATTAAATTTTTAAGGTTTTGTATGACATTTTAATTCAAGCTGGGCGGGTAGTGGACTTGCACATTCCTCGAGTCTCGTGACTCTTCATAACCGTACCCTGAAGTTTGCAGTATGTCACTGTTATTTTCTTCTCAATGCAAATTCTTCCTGGTTTCCTTCCTTCGTTTCTTTTATCTTGATTTTTCTTGATTCAATCTGTTTGTTAACTTATTTATGATTTGATTTTGTACTAATGTTTTGTGTACTAAACTGTTTTTCTCTGTTAAAAAATACTTGGTATGGAAGTTTTCTGTTGTAGGCGTGCAAAGAAGCCTTGTATTCTAATTATTTTGTCTCTCTTTCATTTTTGACTTCGTATTATTTACTTTTCCTGCATTCTGTTTTGGGAAATCTTGTATTGCACTTTAGCTCCTTAACCCCCACAACACCCTCTGCTTTTTTCCACTTCTATTCGAGAGTTGAAGGACAATGTTCCTATTTTTCTTGGACAAGTTTAGCTATGATATTGCTGTCTGGTTTGGAAGAATGTCCACTGTTATCCAACAGTGTTGCATCTACTTGAAAGATAATCTGATCTAATCAAACTTAGTTGAATTTTTTTATTCTTTTATTTTTTTTCTTTTTGCAAATTTGATTGACATGGGCATTTTTTTAATTGATTTTCTAGATTGTCTTGTACGTTGATGGTTTTAATCTTAGTCAAACTTTTTGAAACCTGCTATTATTGACTTTCTACTTAGGACTTTATTTCTCCATTTCCTTTGATGCTTGAATTTTCCATTTGGTAGGAAGGACAAATTGAATTTTATTTGGTCATGCTTGGGAAAACTTCAATTTGTTGCAATTCGAGACATTTACACAACTAGCCAATGAATTTTCTCAGCCAAGGATAAATCAGTTCTAAACCTTTACCTTTCATTTATTAATTTTTATATGTTCCCATGCAGCCTGCTACTTTGGCGGCCAATTTAAAAGTTGTGTTTACTTGTGTACTTGATGAAGTTAGTTGGATAAAATCAATTGCAGCCTTTAATTGTTGTCTTTTTGGTTTTGTCAGTACTTAGGTTTCTTCTTTTCTTGTCTAATTGCAGGTCAGTCAATATATCACAAATTGTCTAGGGACAGCTTGACTGAAGCAGCTGCTTTGAGGGAAAGGTTTTTGCTAGGTACAGGTGTTAGTAGAAGAGTGGCTGCTGCAACTGCTTCTGCAGTAATTTTCTGATCATTACTCTTTTGTTGCATTCATAATTATCACAGATAATTACTTTCTTATCTTGTAAAAGGTATTGCCTTAGTTTGCACAAAAAGTGACAATGGAAACTCTGTCTTAAATCATGTTTGCAGGCAGAAGCAGCTGGTAAAAGCGGTTTCAAATCTTTCATGGTTGCTTTACAACGTTGTGGTAGTACTGTGGCAATAGTCCAACAAGTACGATGATGCTTTCTATTATTTAGTCACATGTTGGTTGATCATATATCTTGCAATTAAGAGCTTGTTTTAAACCATGTCTTTGAACGTTGGGACATATTTTGCAATATAGATGTGGAGCTCAAGCTTTTGAAATATTTCCTCATTTACATAGTTTAAAATATTCTCTTCTTTCAAGTTAGCCACTTCTTTTGTTGAGCTCAACTTTATGTAATTTGTTTTGTAGGCTTTATTTTGGAGTGTCAATAATGACACAAAACTGACCCATCTAATGGATTAGCAGACATTTTGGTATGGGTACTTCCATGAGCCATTAGAAATAAACTTGGTATTTTTATATTTTGTTCAACTTGTTATAAAATCGTGTTTGTTCCATTGTTTTTAAAGAGTTTTAAATGTTGAATCATTCTCTGTTTGACAAGTTTGTTGGTATGTTCCTAAGTTTAAGGTTTGATAATTCTAATGGTTTGATGAGTTTAATATTTCTTTTCGTGATAAGTTTGATTGTTATGTTCTTTAAGTTTTTGCTAAGTTTAGTTTAGTTGTTATGTTCATGAATTTTTTATACTTTAAAAGCACTTTAAGTCATAATTCTAATATTGGGTATAGCCATTGATTGTAGTTCCTAGCAAATTCGAGCAATTCTATTTGCCAATCAGCAAGCTTTCGGGTTCAAAATGGGCTTTTGGTGACTACCCACAATTGGAACAACCTTAGGATTGAATGCTCATAGGCTAGGGGGTTCAGATTAGCAATTTCGAACTCATTCGGTCATTGGACAACAAGCATTCGAGGTTGTTGGGTGACGATTTGTAAGTTCCCACGTCCATAAACCTTTTGAATGCAACTAGATTAACTTTAGTATAGTTTATAACCATCAATTAGTTTAGTTGTTCTACCTTTAAAGTTTTGTTTCAGCTAGACTTAGCTAATTGATTTTACTACTTGGTAGATGTTCTTGTAATTTATTTAAGTTGTGATCTGACTTTGATATTAATTTGTTAGTTTACATGTTCAAATGGTCTTTGTGTGAGCTAGAGTCATTTCGTTTTTTAAATTGAATTCTATAGACTTGTTTAGAAGTCTGAGGCAAAGCTGTAGCCTTTCATTTGAATAGTGATTGATGCGAGATCTTACTCGTTTTGATTTGCAGGGGTTTGTAGTGGAATTCTGTGTCTATAGAATTGTGTTTCTCGTGTTTAACAGGTTAAGGAAAATTTTGGGTTAGTCTTATGTTTGTTGTTATGCTGTCGACATTTCTGGAGCATCTAGTTTGGAGTCAAGATAGGGGCTTAGTAATGTCACTAGGTTAGCTGATGAAGAAAACTTAAAATAACTAATATGAATTAATTAAGGTAGAGCATAGAGGATAGCAAGAGTATATATGATCAAAGCATGAAGCTTGACTTTTGATTGTTCATTTCTTTATAATGAATATGCAAGTAAATTGTGTAAGTTCCTATATATTTGACTTCTTCTATAGTTGAGGAGTTTTACAATTTGAAGTATATGTTGGTGTATTCTCTTGCTCGTGCAAAAGTTCACTCTTCCTTGCCTAAGATAGAAAATTTGATAAGAATGATTTTTTGATCATTGAACCTAACAATATGGTGAATTACAACTTTTAAAATGCAAGCACAATGAATTCTCTTTGCTTGTGCTTGTTGTATTTTCTAAGTTTTTGCTAAGTTTAGTTTAATTGTTATGTTCATGTATTTTTTATACTTTGGTTAAGTTTGTATTTATGTTCAATAAAGTTTGACATCGTGCTAATTTGATGAGTTTAGTTTATTTTCTTGTGATATATGTTATTCATACTTCAAATTTTAATTCTCTTGCTTACAATATTTTCATTTCTTCTTTTGTGTCAGATCAAAGATCCTATGCATCAATGGCTTCAAGAGCTTCAAGAACAAATTACACGATATTCGATCAATCTTCACATAGTTATGTTTTTTTTTCTTTGTTTGTTTCTACAATTGACAATATTGTACTCAACAAATGTCATATTTGTATGTTTAAATTTGTCCAAATTTTGATTCAATGATATATAAAAGTTGCTATTTGTAATATTTAGTTGTTATTTTGATGTAAATATTAAGTAGTTACTCATACTATTAAAATGCTTTTAGGATACTATTTGAAAACTGTCATGATATATATTTTTATTGACAATCAAAATCCTTTAATGAAAACATGTTTGTGACAATAAATACTACTGTCATTAAAAGTATTTCTTTGATGTTGAAAGTGTTATTGTGCATATTTTTTTTACGACAAGAAATCATCCTCCAAAGTATTTTTATGACAAAAAAATTGTCATGATTAATATATTGTTATAGTAACACATTGACATCATTTACATATTCTTGATTGTAATATATTGTCATTATTAAGTTTTTATTGACAATAATGAATTGTCGATATATATATCTTGACAGTAAAATAGTTTTTATTGATTTTGTAATGACATTGTACAATTGTCATAAAACAAATTAGTGTGACGTTAAAAAAAAAAAGTCAAGAAAAATTAGTCATTTGACAATTTTTAACTGTCATAATTAATATATTTGTGACAATTTTTGCGAAACTGTCTTGTATTGAGCTTTCTTGAGGGTCAATATAATGACTACAAAAAAATGTCAAGAAATATGTTTTTGATTTTTCACTGTCATGAAAAGTCAAATTTGTAGTAGTGTTGGCAGAGGCATTTTCCCAAATTCTGAGAAGTTAGGTTCCATTCCAATTCCAATGGCCACTGCCCAAGTTTCCCTCCAAAACTTCTTCTCAATCCCAACCGTCGGTTTCGATTTCCGACCGAGCAAATCCAGTCGACCAACCGGCCTCACACAGAGCAGAAAGTCAAAGTGGGTCATTCGATCAAAATTGGCAGATCAAAGCTGTAAGAAATTGACGGTTGATGGAAGAGATTGTTGAAGTCTCTTATCAAATAAATTTATAATCCACAACCTCTAAAGCTAACTTGTAGCATAGTGGTCGAGGTTGATCATAGGGAGCATCGTGATTAATCAATTTAATTAGATTTCTCAATCAGTAACTAAAAAGTGGGTTTTTTGAAAGATCGATTGATTGGAAACATAAATCTGCAATAAAGTAAAATAACGAGGAAGTAAAGGTAGTTTAGTTAATCTCACCTCAGGATCGCGCAATTGGTTATTCTAACTTGGATTTGGCTACTCAATCATTGACACTCAAATTTAAAGAATTATTATTGATTACTCATCATTCATTGGAACCAATGATTAAGATCTATATCCTTCCAATTCGACAAAAACATCAACGTTGGAATCTAATTAGAATTCATAAACATGAACCTAACCGCATAAAGAGAATTTGATCGTTGAGTAGATTTGCATAAACTAGGAACAACCTAAATTCATACAATTCTAAGCTCAAATTCCTAAATCTATCATGCAAATATATCAAATGAGATAACAACTCCATTCAACACAATCACACAATAAATCTATCACTAACCAATTAGTAAAACAATTACTTTAAATCAAGCAAATAGTTTGTCAAACTATTCTATCAAAGCAATTGTAATTTGAGAATGAGAATTCAAGACATAACCAACAATAATTCATCTAAAATCATAAACAAGGTCTCGAGAGTATGCCAAACTTACATTAGAAGTCCCCAATTGCAACGATATAAACTTAGCCGGTCATTGGAACACTCCAACTAAGCTCCTCGGCTTGATTAACCATCCCAAAGTACAATAAAACGCACTAGAATTACAAAAGAATGCAAATAAATTCAGGGAGAAAGAAGGGGACATTGGCCAGGAGGGGGAAAAACTGAGAGGAAGACCTAAAATCTGAAAACTGTATTTTATACCCAGCCGCAGCGTCGCGATGTTGCCCTCTGCAGAATAGGAAAAAACTCTCGGGTTGCCCTAGCGTCGCGATGCTAGGACAACAACGTCTCGACGCTTTTGCTTCGGCGCAAATTCCAGAATCTTTCCCTTATCCGAACAGCGTCCCAACGCTACTTGGGAGGGTCTCGACGCTCGTGATGTTCCAGGGGTAG

mRNA sequence

ATGCCCACGCCGGCGAGTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCGCTGTCTTCGTCGAGCAGCCCTCCAGTCGCGCCAGTTTCGTTCTCCATCTCCCTCTCGGTTTTGTGCAAAGCGATTCGCATCAGATCCACGCATTTTTTCCTTTCGTCGTCTTCTTTCCTTGCCCAAAGCGGCCGCGAGCAGCCCAACCCATCCTAATGTGGTATTGCATTTTTTTTTTCGGATTGTTGGCCCTGGTCTTAACAAAGCAGATAAGTTCCCAACATTGGTGACACACCAAGAATTGCTTGAATCCAAAGTGAATGAGACCAAGGCAATGGTCAAGTTTCAATTGAAGAAGGTTCTTTGCATGGGAGTTGTCGTGGGAAATGTTGACATGGAGGAGAAGCAAGTTTTCCAAAATGTGCAAATGAGCATCAACTTCCTGGTTTCTTTGTTGAAAAAGAGCTGTCAGTCAATATATCACAAATTGTCTAGGGACAGCTTGACTGAAGCAGCTGCTTTGAGGGAAAGGTTTTTGCTAGGTACAGGTGTTAGTAGAAGAGTGGCTGCTGCAACTGCTTCTGCAGCAGAAGCAGCTGGTAAAAGCGGTTTCAAATCTTTCATGGTTGCTTTACAACGTTGTGGTAGTACTGTGGCAATAGTCCAACAAGGGTTTGTAGTGGAATTCTGTGTCTATAGAATTGTGTTTCTCGTGTTTAACAGTAGTGTTGGCAGAGGCATTTTCCCAAATTCTGAGAAGTTAGGTTCCATTCCAATTCCAATGGCCACTGCCCAAGTTTCCCTCCAAAACTTCTTCTCAATCCCAACCGTCGGTTTCGATTTCCGACCGAGCAAATCCAGTCGACCAACCGGCCTCACACAGAGCAGAAAGTCAAAGTGGGTCATTCGATCAAAATTGGCAGATCAAAGCTCCGCAGCGTCGCGATGTTGCCCTCTGCAGAATAGGAAAAAACTCTCGGGTTGCCCTAGCGTCGCGATGCTAGGACAACAACGTCTCGACGCTTTTGCTTCGGCGCAAATTCCAGAATCTTTCCCTTATCCGAACAGCGTCCCAACGCTACTTGGGAGGGTCTCGACGCTCGTGATGTTCCAGGGGTAG

Coding sequence (CDS)

ATGCCCACGCCGGCGAGTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCGCTGTCTTCGTCGAGCAGCCCTCCAGTCGCGCCAGTTTCGTTCTCCATCTCCCTCTCGGTTTTGTGCAAAGCGATTCGCATCAGATCCACGCATTTTTTCCTTTCGTCGTCTTCTTTCCTTGCCCAAAGCGGCCGCGAGCAGCCCAACCCATCCTAATGTGGTATTGCATTTTTTTTTTCGGATTGTTGGCCCTGGTCTTAACAAAGCAGATAAGTTCCCAACATTGGTGACACACCAAGAATTGCTTGAATCCAAAGTGAATGAGACCAAGGCAATGGTCAAGTTTCAATTGAAGAAGGTTCTTTGCATGGGAGTTGTCGTGGGAAATGTTGACATGGAGGAGAAGCAAGTTTTCCAAAATGTGCAAATGAGCATCAACTTCCTGGTTTCTTTGTTGAAAAAGAGCTGTCAGTCAATATATCACAAATTGTCTAGGGACAGCTTGACTGAAGCAGCTGCTTTGAGGGAAAGGTTTTTGCTAGGTACAGGTGTTAGTAGAAGAGTGGCTGCTGCAACTGCTTCTGCAGCAGAAGCAGCTGGTAAAAGCGGTTTCAAATCTTTCATGGTTGCTTTACAACGTTGTGGTAGTACTGTGGCAATAGTCCAACAAGGGTTTGTAGTGGAATTCTGTGTCTATAGAATTGTGTTTCTCGTGTTTAACAGTAGTGTTGGCAGAGGCATTTTCCCAAATTCTGAGAAGTTAGGTTCCATTCCAATTCCAATGGCCACTGCCCAAGTTTCCCTCCAAAACTTCTTCTCAATCCCAACCGTCGGTTTCGATTTCCGACCGAGCAAATCCAGTCGACCAACCGGCCTCACACAGAGCAGAAAGTCAAAGTGGGTCATTCGATCAAAATTGGCAGATCAAAGCTCCGCAGCGTCGCGATGTTGCCCTCTGCAGAATAGGAAAAAACTCTCGGGTTGCCCTAGCGTCGCGATGCTAGGACAACAACGTCTCGACGCTTTTGCTTCGGCGCAAATTCCAGAATCTTTCCCTTATCCGAACAGCGTCCCAACGCTACTTGGGAGGGTCTCGACGCTCGTGATGTTCCAGGGGTAG

Protein sequence

MPTPASLSPSPSPSPSRCLRRAALQSRQFRSPSPSRFCAKRFASDPRIFSFRRLLSLPKAAASSPTHPNVVLHFFFRIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSIYHKLSRDSLTEAAALRERFLLGTGVSRRVAAATASAAEAAGKSGFKSFMVALQRCGSTVAIVQQGFVVEFCVYRIVFLVFNSSVGRGIFPNSEKLGSIPIPMATAQVSLQNFFSIPTVGFDFRPSKSSRPTGLTQSRKSKWVIRSKLADQSSAASRCCPLQNRKKLSGCPSVAMLGQQRLDAFASAQIPESFPYPNSVPTLLGRVSTLVMFQG
Homology
[Close]
BLAST of Lag0034665 vs. NCBI nr
Match: TYI64797.1 (hypothetical protein E1A91_D09G113500v1 [Gossypium mustelinum])

HSP 1 Score: 139.0 bits (349), Expect = 8.0e-29
Identity = 69/80 (86.25%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQIFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. NCBI nr
Match: XP_038998983.1 (60S ribosomal protein L10a-like isoform X1 [Hibiscus syriacus])

HSP 1 Score: 139.0 bits (349), Expect = 8.0e-29
Identity = 69/80 (86.25%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQ
Sbjct: 134 RLLGPGLNKAGKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQIFQ 193

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 194 NVQMSVNFLVSLLKKNWQNV 213

[Close]
BLAST of Lag0034665 vs. NCBI nr
Match: XP_038998985.1 (60S ribosomal protein L10a-like isoform X2 [Hibiscus syriacus] >XP_038998986.1 60S ribosomal protein L10a-like isoform X2 [Hibiscus syriacus])

HSP 1 Score: 139.0 bits (349), Expect = 8.0e-29
Identity = 69/80 (86.25%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQIFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. NCBI nr
Match: XP_022142655.1 (60S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal protein L10a [Momordica charantia])

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-28
Identity = 69/80 (86.25%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. NCBI nr
Match: XP_028773124.1 (60S ribosomal protein L10a-1 [Prosopis alba] >XP_028773130.1 60S ribosomal protein L10a-1 [Prosopis alba] >XP_028808249.1 60S ribosomal protein L10a-1 [Prosopis alba])

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-28
Identity = 68/80 (85.00%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.8e-30
Identity = 65/80 (81.25%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.8e-30
Identity = 65/80 (81.25%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQ
Sbjct: 122 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 182 NVQMSVNFLVSLLKKNWQNV 201

[Close]
BLAST of Lag0034665 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.7e-29
Identity = 64/80 (80.00%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLV+HQE LE+KVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.9e-29
Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           N+QMS+NFLVSLLKK+ Q++
Sbjct: 181 NIQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.9e-29
Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           N+QMS+NFLVSLLKK+ Q++
Sbjct: 181 NIQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. ExPASy TrEMBL
Match: A0A5D2TI51 (Ribosomal protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G113500v1 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-29
Identity = 69/80 (86.25%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQIFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. ExPASy TrEMBL
Match: A0A6J1CLJ2 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111012713 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.6e-29
Identity = 69/80 (86.25%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. ExPASy TrEMBL
Match: A0A803R995 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.6e-29
Identity = 68/81 (83.95%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGN+ MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLSMEEKQVFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSIY 158
           NVQMS+NFLVSLLKK+ Q+++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVF 201

[Close]
BLAST of Lag0034665 vs. ExPASy TrEMBL
Match: A0A6J1JCI3 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-28
Identity = 69/80 (86.25%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. ExPASy TrEMBL
Match: A0A1U8PI61 (Ribosomal protein OS=Gossypium hirsutum OX=3635 GN=LOC107959357 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-28
Identity = 69/80 (86.25%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 132.5 bits (332), Expect = 7.0e-31
Identity = 65/80 (81.25%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 132.5 bits (332), Expect = 7.0e-31
Identity = 65/80 (81.25%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQ
Sbjct: 122 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 182 NVQMSVNFLVSLLKKNWQNV 201

[Close]
BLAST of Lag0034665 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 132.5 bits (332), Expect = 7.0e-31
Identity = 65/80 (81.25%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQ
Sbjct: 122 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 182 NVQMSVNFLVSLLKKNWQNV 201

[Close]
BLAST of Lag0034665 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-30
Identity = 64/80 (80.00%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLV+HQE LE+KVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

[Close]
BLAST of Lag0034665 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-30
Identity = 64/80 (80.00%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 77  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQ 136
           R++GPGLNKA KFPTLV+HQE LE+KVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 137 NVQMSINFLVSLLKKSCQSI 157
           NVQMS+NFLVSLLKK+ Q++
Sbjct: 181 NVQMSVNFLVSLLKKNWQNV 200

The following BLAST results are available for this feature:
BLAST of Lag0034665 vs. NCBI nr
Match NameE-valueIdentityDescription
TYI64797.18.0e-2986.25hypothetical protein E1A91_D09G113500v1 [Gossypium mustelinum][more]
XP_038998983.18.0e-2986.2560S ribosomal protein L10a-like isoform X1 [Hibiscus syriacus][more]
XP_038998985.18.0e-2986.2560S ribosomal protein L10a-like isoform X2 [Hibiscus syriacus] >XP_038998986.1 6... [more]
XP_022142655.11.8e-2886.2560S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal p... [more]
XP_028773124.12.3e-2885.0060S ribosomal protein L10a-1 [Prosopis alba] >XP_028773130.1 60S ribosomal prote... [more]
BLAST of Lag0034665 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZB99.8e-3081.2560S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=... [more]
P592319.8e-3081.2560S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=... [more]
P592303.7e-2980.0060S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=... [more]
B8B9K64.9e-2980.0060S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3... [more]
B7F8454.9e-2980.0060S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE... [more]
BLAST of Lag0034665 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D2TI513.9e-2986.25Ribosomal protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G113500v1 PE=3 SV... [more]
A0A6J1CLJ28.6e-2986.25Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111012713 PE=3 SV=1[more]
A0A803R9958.6e-2983.95Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1JCI31.5e-2886.25Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1[more]
A0A1U8PI611.5e-2886.25Ribosomal protein OS=Gossypium hirsutum OX=3635 GN=LOC107959357 PE=3 SV=1[more]
BLAST of Lag0034665 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08360.17.0e-3181.25Ribosomal protein L1p/L10e family [more]
AT5G22440.17.0e-3181.25Ribosomal protein L1p/L10e family [more]
AT5G22440.27.0e-3181.25Ribosomal protein L1p/L10e family [more]
AT2G27530.12.6e-3080.00Ribosomal protein L1p/L10e family [more]
AT2G27530.22.6e-3080.00Ribosomal protein L1p/L10e family [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.190.20coord: 93..165
e-value: 8.6E-12
score: 47.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR23105:SF125RIBOSOMAL PROTEINcoord: 71..161
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 71..161
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 75..156
e-value: 6.5E-10
score: 39.1
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 72..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034665.1Lag0034665.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000470 maturation of LSU-rRNA
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome