Lag0034658 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034658
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Leucine-rich repeat protein kinase family protein
Location	chr3: 9414838 .. 9415572 (+)
RNA-Seq Expression	Lag0034658
Synteny	Lag0034658

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTACTTTTGGCTGCCCACGGATCCCACGATCGCATATTTCCTCTACTTGTACTTCGCGGAGCTGAAGGTGCTTCAAGCCAACGAGTCCAGACAGTTCGACGTATTACTGAATGGAAAACGGTGGCATAATGAATCGATTTCTCCTCGCTATTTATCCGAAATGGCCTTGTTCAGTACCTCACCTATGACTGGCGGAACCTACGAGATCACCCTCGTCAAAACTGCCAATTCAACCCTTCCTCCCATCCTCAATGCTGTTGAAGTTTATGAAGTCGTCAACTTCTCGCAATCCGACACCAGTGGACAAGATGGTATGAATATGAACTTTGAACTACTTTACTGATTTCCCCTGCATCTAGGGTTAAATTTCATTTTGATGCTCTGACTTTCCACATTTTTCGAAATGTGAAGTGTTTGTTTTAGCCTTTCAACATTGAACAGCTATCAATTTTGATTCTTATTTGATTTTGGTCCCAATTAAATAGGTTTTCTTTCCTCATAGAAACCTTTTTATTAAACATATTTTCCATTTGTGAGGGTGACTTTTGCTTTCGTTGTTGCTTCTCTCATGATTTAATTAGTTATGCTTGGTAAGTGCTATCATGTTTGCTATATTTGTTTAAATATATAAACCACTAACCTTTATGCTTTCTCAATGTGATGGTTTACAGGGGTGCAGTCTCAGGAACACGGAGTATATTGTTGGGGCTGTTATTTTTATAGGCCATGA

mRNA sequence

ATGGGTTACTTTTGGCTGCCCACGGATCCCACGATCGCATATTTCCTCTACTTGTACTTCGCGGAGCTGAAGGTGCTTCAAGCCAACGAGTCCAGACAGTTCGACGTATTACTGAATGGAAAACGGTGGCATAATGAATCGATTTCTCCTCGCTATTTATCCGAAATGGCCTTGTTCAGTACCTCACCTATGACTGGCGGAACCTACGAGATCACCCTCGTCAAAACTGCCAATTCAACCCTTCCTCCCATCCTCAATGCTGTTGAAGTTTATGAAGTCGTCAACTTCTCGCAATCCGACACCAGTGGACAAGATGGGGTGCAGTCTCAGGAACACGGAGTATATTGTTGGGGCTGTTATTTTTATAGGCCATGA

Coding sequence (CDS)

ATGGGTTACTTTTGGCTGCCCACGGATCCCACGATCGCATATTTCCTCTACTTGTACTTCGCGGAGCTGAAGGTGCTTCAAGCCAACGAGTCCAGACAGTTCGACGTATTACTGAATGGAAAACGGTGGCATAATGAATCGATTTCTCCTCGCTATTTATCCGAAATGGCCTTGTTCAGTACCTCACCTATGACTGGCGGAACCTACGAGATCACCCTCGTCAAAACTGCCAATTCAACCCTTCCTCCCATCCTCAATGCTGTTGAAGTTTATGAAGTCGTCAACTTCTCGCAATCCGACACCAGTGGACAAGATGGGGTGCAGTCTCAGGAACACGGAGTATATTGTTGGGGCTGTTATTTTTATAGGCCATGA

Protein sequence

MGYFWLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFSTSPMTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQDGVQSQEHGVYCWGCYFYRP

Homology

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BLAST of Lag0034658 vs. NCBI nr
Match: XP_008447576.1 (PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-37
Identity = 76/107 (71.03%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 1   MGYFWLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFS 60
           M +FW P D T A+F+Y+YFAELKVL ANESR+FDV LNGKRWHNES+SPRYL E+  FS
Sbjct: 263 MAFFWQPPDLTTAFFVYMYFAELKVLGANESREFDVFLNGKRWHNESLSPRYLKELVFFS 322

Query: 61  TSPMTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQDGV 108
           T+P+TGG Y+I+ V+T NSTLPPILNA+EVY V+NFSQS+TSG+D V
Sbjct: 323 TAPLTGGNYQISFVRTPNSTLPPILNALEVYRVLNFSQSETSGEDVV 369

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BLAST of Lag0034658 vs. NCBI nr
Match: XP_022148140.1 (putative leucine-rich repeat receptor-like protein kinase At2g19210 [Momordica charantia])

HSP 1 Score: 165.2 bits (417), Expect = 3.5e-37
Identity = 75/105 (71.43%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 1   MGYFWLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFS 60
           M + WLP DPT A+F+Y+YFAELK LQANESR FD++LNGK WHNESISP +L+E+ +FS
Sbjct: 263 MEFRWLPXDPTAAFFVYMYFAELKELQANESRVFDIMLNGKLWHNESISPAFLAELVVFS 322

Query: 61  TSPMTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQD 106
           TSP+TGGTY++++VKTANSTLPPILNA+E+Y VVNFSQS+T+ QD
Sbjct: 323 TSPVTGGTYDVSIVKTANSTLPPILNALEIYRVVNFSQSETNEQD 367

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BLAST of Lag0034658 vs. NCBI nr
Match: XP_004146862.1 (putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucumis sativus] >KGN59853.1 hypothetical protein Csa_002078 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 6.0e-37
Identity = 72/105 (68.57%), Postives = 93/105 (88.57%), Query Frame = 0


Query: 1   MGYFWLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFS 60
           M +FW P D T A+F+Y+YFAELKVL+ANESR+FDVLLNG+RWHNES+SPRYL E+  +S
Sbjct: 263 MAFFWEPPDSTTAFFVYMYFAELKVLKANESREFDVLLNGRRWHNESLSPRYLEELVFYS 322

Query: 61  TSPMTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQD 106
           T+P+TGG Y+I+ V+T NSTLPPILNA+E+Y V+NFS+S+TSG+D
Sbjct: 323 TAPLTGGNYQISFVRTPNSTLPPILNALEIYRVLNFSESETSGED 367

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BLAST of Lag0034658 vs. NCBI nr
Match: XP_038902515.1 (putative leucine-rich repeat receptor-like protein kinase At2g19210 isoform X1 [Benincasa hispida] >XP_038902522.1 putative leucine-rich repeat receptor-like protein kinase At2g19210 isoform X2 [Benincasa hispida])

HSP 1 Score: 155.6 bits (392), Expect = 2.8e-34
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MGYFWLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFS 60
           M + W P D T A+F+Y+YFAELKVL ANESR FDV LNGKRWHNES+SP YL E+ LFS
Sbjct: 263 MAFTWEPPDSTTAFFVYMYFAELKVLGANESRVFDVFLNGKRWHNESLSPGYLEELVLFS 322

Query: 61  TSPMTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQDGV 108
            +P+TGG Y+ + V+T NSTLPPILNA+EVY+V+NF+QS+T GQD V
Sbjct: 323 AAPLTGGNYQFSFVRTPNSTLPPILNALEVYQVLNFTQSETRGQDVV 369

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BLAST of Lag0034658 vs. NCBI nr
Match: XP_022998690.1 (putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucurbita maxima])

HSP 1 Score: 151.4 bits (381), Expect = 5.2e-33
Identity = 72/107 (67.29%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 1   MGYFWLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFS 60
           M + W P D T  +FLY+YFAELK LQANESR+FD+ +NG+RW N+S SP++LS   +FS
Sbjct: 263 MVFTWQPPDSTTPFFLYMYFAELKKLQANESREFDITVNGERWLNKSFSPQFLSVSIVFS 322

Query: 61  TSPMTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQDGV 108
           TSPMTGG+YEI+LV+TANSTLPPILNAVE+Y VVNFSQS+T+ +D V
Sbjct: 323 TSPMTGGSYEISLVRTANSTLPPILNAVEIYRVVNFSQSETAREDVV 369

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BLAST of Lag0034658 vs. ExPASy Swiss-Prot
Match: O65924 (Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidopsis thaliana OX=3702 GN=At2g19210 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.3e-20
Identity = 51/103 (49.51%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 3   YFWLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFSTS 62
           + W P DPT  YF+Y++FAE+  L +NE+R+F VLLN K  +  S SPRYL    LF  +
Sbjct: 269 FSWEPKDPTWKYFVYMHFAEVVELPSNETREFKVLLNEKEINMSSFSPRYLYTDTLFVQN 328

Query: 63  PMTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQD 106
           P++G   E  L +T  STLPPI+NA+E Y V  F QS T  QD
Sbjct: 329 PVSGPKLEFRLQQTPRSTLPPIINAIETYRVNEFLQSPTDQQD 371

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BLAST of Lag0034658 vs. ExPASy Swiss-Prot
Match: C0LGP2 (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana OX=3702 GN=MEE39 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.2e-17
Identity = 42/100 (42.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 5   WLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFSTSP- 64
           W   +P    +LY++F+E++VL+AN++R+FD++LNG+  +   ++P+YL  M   +T+P 
Sbjct: 266 WRLENPDDQIYLYMHFSEIQVLKANDTREFDIILNGETINTRGVTPKYLEIMTWLTTNPR 325

Query: 65  -MTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTS 103
              GG   + L KT  STLPP+LNA EVY V+   QS T+
Sbjct: 326 QCNGGICRMQLTKTQKSTLPPLLNAFEVYSVLQLPQSQTN 365

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BLAST of Lag0034658 vs. ExPASy Swiss-Prot
Match: O81069 (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana OX=3702 GN=At2g28990 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.1e-17
Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 5   WLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFSTSPM 64
           W P       +LY++FAE++ L+ANE+RQFDV+L G  +++   SP  L    L++  PM
Sbjct: 260 WDPLPINAEVYLYMHFAEIQTLEANETRQFDVILRG-NFNHSGFSPTKLKVFTLYTEEPM 319

Query: 65  TGGT--YEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQD 106
             G+    + LVKT NSTLPP++NA+E Y V+ FSQ +TS  D
Sbjct: 320 KCGSEGCYLQLVKTPNSTLPPLINAIEAYSVIEFSQLETSLSD 361

[Close]

BLAST of Lag0034658 vs. ExPASy Swiss-Prot
Match: Q9FZB8 (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana OX=3702 GN=At1g51810 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.3e-17
Identity = 47/104 (45.19%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 1   MGYFWLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFS 60
           M + W    PT  ++L+L+FAEL+ LQANE+R+F+V+LNG     +S SP++L    ++S
Sbjct: 255 MEFPWNLEPPTSQFYLFLHFAELQSLQANETREFNVVLNGNVTF-KSYSPKFLEMQTVYS 314

Query: 61  TSP--MTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTS 103
           T+P    GG   + LVKT+ STLPP++NA+E Y V++F Q +T+
Sbjct: 315 TAPKQCDGGKCLLQLVKTSRSTLPPLINAMEAYTVLDFPQIETN 357

[Close]

BLAST of Lag0034658 vs. ExPASy Swiss-Prot
Match: Q9FN93 (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana OX=3702 GN=At5g59680 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-16
Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 5   WLPTDPTIAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFSTSPM 64
           W   +P   Y++Y +F+E++ LQANE+R+F++LLNGK +    + P+ L+   + S SP 
Sbjct: 265 WSSVNPDEQYYVYAHFSEIQELQANETREFNMLLNGKLFFGPVVPPK-LAISTILSVSPN 324

Query: 65  T--GGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQD 106
           T  GG   + L++T  STLPP+LNA EVY+V+ F Q +T+  D
Sbjct: 325 TCEGGECNLQLIRTNRSTLPPLLNAYEVYKVIQFPQLETNETD 366

The following BLAST results are available for this feature:

BLAST of Lag0034658 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447576.1	2.7e-37	71.03	PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [...	[more]
XP_022148140.1	3.5e-37	71.43	putative leucine-rich repeat receptor-like protein kinase At2g19210 [Momordica c...	[more]
XP_004146862.1	6.0e-37	68.57	putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucumis sat...	[more]
XP_038902515.1	2.8e-34	67.29	putative leucine-rich repeat receptor-like protein kinase At2g19210 isoform X1 [...	[more]
XP_022998690.1	5.2e-33	67.29	putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucurbita m...	[more]

BLAST of Lag0034658 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65924	5.3e-20	49.51	Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidops...	[more]
C0LGP2	4.2e-17	42.00	Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis ...	[more]
O81069	7.1e-17	44.66	Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidops...	[more]
Q9FZB8	9.3e-17	45.19	Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidop...	[more]
Q9FN93	2.1e-16	42.72	Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidop...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024788	Malectin-like domain	PFAM	PF12819	Malectin_like	coord: 4..93 e-value: 7.8E-24 score: 84.5
None	No IPR available	PANTHER	PTHR45631:SF103	RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED	coord: 7..105
None	No IPR available	PANTHER	PTHR45631	OS07G0107800 PROTEIN-RELATED	coord: 7..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034658.1	Lag0034658.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity