Lag0034628 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034628
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Cupin_5 domain-containing protein
Location	chr3: 9041483 .. 9043200 (-)
RNA-Seq Expression	Lag0034628
Synteny	Lag0034628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTGCATCAGAAATTATAGCGAAATTGGATTTGAAGCCACATCCAGAAGGCGGTTTTTACTCTGAAACTTTCAGAGACAAGTCCGTTCATCTCTCCAAATCTCATCTCCCGTCGGCATGTAAGTCGAATTTCTCCATCATACTTCCATTGATTTCTCTGTTCTCTCTTCGTTTTGATTCGTTTGATTGCACGACCGAGTCCTGATTTCACACTCTTCACTCTACTTCGCTGGATTTTTATGAACTCGAATCGCATCTACCCCCACCGAGAACAGGATCGCTTGTCTTGTTTTCCGGAAATTGGAATCTGAGAATCAAGCATGATCTAGCGAACTCATCACTGTTCTTCGTTGGCTAATTTGTCGTCCATTGGATTTTCCTTTTCCATGTTTGAGTTTCCTTTTCTTATGCGCTCTCGATCGATCTTTTTAAGTCGTTTTCAACTTTGTTCTGATGCAGACAAGGTTGATCGAGAGGTCAGCACGTGTATATACTTTTTGGTGCCTTCTGGATGTGTGTCTTCTCTTCATCGGATTCCATGTGCAGAGACTTGGCATTTTTACTTGGGAGAACCTCTTACGGTAGGGTTCTAATTATTAGAGATTTCATGAAGTACTATTTTGTCTATGTTTCTGATCGGATATTTCGTTATTTGGCATGCGCTTGATCGGGTTTTTGTTGGATATTACTTTCTGTCCTCCTCTCCACACTTCTTGAGAAATTAAGATGCAGACTAGGATGAATTTGGCCTACTTTCTAGTTTGAACACTATTTATAGAAAGTGTTTTTGAAAATGGGTTTAATTAAAATCCTTTTGTGTTCGTTTACATTTAGAAGTGTATATATTTGGTTGCACTACATCTAACAGTGATTCTGTGAATGTCAAATTACATAAGTGATTTTGAAGTGATTTGCAGTCAATCATTGTCTGGAAAATCAACTTCAATATGATTTCAACCAATATTATTTTTTTCATAAGTGATTTGTTTTTGTTGTTAAACACTCTAGATTTAAAAATATATATATTTTTTTAAAAAAATCAGCCTTGAAAATCACATACAAATGCACTTTTAGTTCAAACAGTGATGCTGCATAAATGAACATAACTTGTTTCTTCCTCTACATTCGTGATAAGTAAGATAATGGACATAGTTTGATGTGTATGTTTAATGGAAAACAAAATCTGGCTAAATGCACAATTGCTTGTGATCGAGGGGTAAAAATTGTAATTAGTGCTGGTTTTCTGCTATCCAACTCATTTATTATTCCCCTCATTCGTTGCTTTCAAGTTTTGCTTTATACCCGTATGGGTAGTCCTCTCTGCCCTTATCTTTCCTCTATGATGATATGATACTATCCTTATTATTGAAATTATTGCCTGGATTATAGATACTGGAGTTGAATGAAGAGGATGGTCGAGTCAAATTGACTCGTCTTGGGTCTGATCTCATTGGAGACAATCAATTACCTCAGTATACAGTGCCTCCTAATGTCTGGTTTGGGGCTTTTCCAACCAAGGACTTAAGTATTTCTGCAGATGGGACTTTGACTAAAGCTTCTCCAAGGGACTCTGAGAATCACTACTCGCTTGTGGGCTGCAGCTGTGCACCTGCTTTCCAGTTTGAGGACTTTGAGTTGGCAAAACGTTCTGACCTTGTTTCACGTTTTCCTGCTAGTGAGGCTCTCGTCTCTTTGCTCACACCAGATGCCTGA

mRNA sequence

ATGGCTACTGCATCAGAAATTATAGCGAAATTGGATTTGAAGCCACATCCAGAAGGCGGTTTTTACTCTGAAACTTTCAGAGACAAGTCCGTTCATCTCTCCAAATCTCATCTCCCGTCGGCATACAAGGTTGATCGAGAGGTCAGCACGTGTATATACTTTTTGGTGCCTTCTGGATGTGTGTCTTCTCTTCATCGGATTCCATGTGCAGAGACTTGGCATTTTTACTTGGGAGAACCTCTTACGATACTGGAGTTGAATGAAGAGGATGGTCGAGTCAAATTGACTCGTCTTGGGTCTGATCTCATTGGAGACAATCAATTACCTCAGTATACAGTGCCTCCTAATGTCTGGTTTGGGGCTTTTCCAACCAAGGACTTAAGTATTTCTGCAGATGGGACTTTGACTAAAGCTTCTCCAAGGGACTCTGAGAATCACTACTCGCTTGTGGGCTGCAGCTGTGCACCTGCTTTCCAGTTTGAGGACTTTGAGTTGGCAAAACGTTCTGACCTTGTTTCACGTTTTCCTGCTAGTGAGGCTCTCGTCTCTTTGCTCACACCAGATGCCTGA

Coding sequence (CDS)

ATGGCTACTGCATCAGAAATTATAGCGAAATTGGATTTGAAGCCACATCCAGAAGGCGGTTTTTACTCTGAAACTTTCAGAGACAAGTCCGTTCATCTCTCCAAATCTCATCTCCCGTCGGCATACAAGGTTGATCGAGAGGTCAGCACGTGTATATACTTTTTGGTGCCTTCTGGATGTGTGTCTTCTCTTCATCGGATTCCATGTGCAGAGACTTGGCATTTTTACTTGGGAGAACCTCTTACGATACTGGAGTTGAATGAAGAGGATGGTCGAGTCAAATTGACTCGTCTTGGGTCTGATCTCATTGGAGACAATCAATTACCTCAGTATACAGTGCCTCCTAATGTCTGGTTTGGGGCTTTTCCAACCAAGGACTTAAGTATTTCTGCAGATGGGACTTTGACTAAAGCTTCTCCAAGGGACTCTGAGAATCACTACTCGCTTGTGGGCTGCAGCTGTGCACCTGCTTTCCAGTTTGAGGACTTTGAGTTGGCAAAACGTTCTGACCTTGTTTCACGTTTTCCTGCTAGTGAGGCTCTCGTCTCTTTGCTCACACCAGATGCCTGA

Protein sequence

MATASEIIAKLDLKPHPEGGFYSETFRDKSVHLSKSHLPSAYKVDREVSTCIYFLVPSGCVSSLHRIPCAETWHFYLGEPLTILELNEEDGRVKLTRLGSDLIGDNQLPQYTVPPNVWFGAFPTKDLSISADGTLTKASPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPASEALVSLLTPDA

Homology

[Close]

BLAST of Lag0034628 vs. NCBI nr
Match: XP_004144040.1 (uncharacterized protein LOC101210771 isoform X1 [Cucumis sativus] >KGN66316.1 hypothetical protein Csa_006880 [Cucumis sativus])

HSP 1 Score: 369.4 bits (947), Expect = 1.9e-98
Identity = 174/189 (92.06%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MATASEIIAKLDLKPHPEGGFYSETFRDKSVHLSKSHLPSAYKVDREVSTCIYFLVPSGC 60
           MATASEI+ KL+LKPHPEGGFYSETFRD SVHLSKSHLP  YKVDREVSTCIYFL+PSGC
Sbjct: 1   MATASEIVGKLNLKPHPEGGFYSETFRDYSVHLSKSHLPPEYKVDREVSTCIYFLMPSGC 60

Query: 61  VSSLHRIPCAETWHFYLGEPLTILELNEEDGRVKLTRLGSDLIGDNQLPQYTVPPNVWFG 120
           VSSLHRIPCAETWHFYLGEPLT+LELNE+DGRVKLT LGSDLIGDNQLPQYTVPPNVWFG
Sbjct: 61  VSSLHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGSDLIGDNQLPQYTVPPNVWFG 120

Query: 121 AFPTKDLSISADGTLTKASPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPASEA 180
           AFPTKD +ISADGTLTKA+PRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFP SEA
Sbjct: 121 AFPTKDFNISADGTLTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSEA 180

Query: 181 LVSLLTPDA 190
            VSLLTPDA
Sbjct: 181 FVSLLTPDA 189

[Close]

BLAST of Lag0034628 vs. NCBI nr
Match: XP_038878514.1 (uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878515.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878516.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878517.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878518.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878519.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878521.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878522.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878523.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878524.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878525.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878526.1 uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878527.1 uncharacterized protein LOC120070727 [Benincasa hispida])

HSP 1 Score: 365.9 bits (938), Expect = 2.1e-97
Identity = 170/188 (90.43%), Postives = 181/188 (96.28%), Query Frame = 0


Query: 1   MATASEIIAKLDLKPHPEGGFYSETFRDKSVHLSKSHLPSAYKVDREVSTCIYFLVPSGC 60
           MATASEI+AKL+LKPHPEGGFY+ETFRD SVHLSKSHLP  YKVDREVSTCIYFLVPSGC
Sbjct: 1   MATASEIVAKLNLKPHPEGGFYAETFRDSSVHLSKSHLPPEYKVDREVSTCIYFLVPSGC 60

Query: 61  VSSLHRIPCAETWHFYLGEPLTILELNEEDGRVKLTRLGSDLIGDNQLPQYTVPPNVWFG 120
           VS+LHRIPCAETWHFYLGEPLT+LELNE+DGRVKLT LGSDLIGDNQLPQYTVPPNVWFG
Sbjct: 61  VSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGSDLIGDNQLPQYTVPPNVWFG 120

Query: 121 AFPTKDLSISADGTLTKASPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPASEA 180
           AFPTKD +ISADGT+TKA+PRDSENHYSLVGCSCAPAFQFEDFELAKRSDL SRFP SEA
Sbjct: 121 AFPTKDFNISADGTVTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLASRFPNSEA 180

Query: 181 LVSLLTPD 189
           L+SLLTP+
Sbjct: 181 LISLLTPE 188

[Close]

BLAST of Lag0034628 vs. NCBI nr
Match: XP_008450945.1 (PREDICTED: uncharacterized protein LOC103492382 [Cucumis melo] >KAA0055762.1 Cupin_5 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 364.8 bits (935), Expect = 4.6e-97
Identity = 172/189 (91.01%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MATASEIIAKLDLKPHPEGGFYSETFRDKSVHLSKSHLPSAYKVDREVSTCIYFLVPSGC 60
           MATAS+I+AKL+LKPHPEGGFYSETFRD SVHLSKS LPS YKVDREVSTCIYFL+PSGC
Sbjct: 1   MATASQIVAKLNLKPHPEGGFYSETFRDYSVHLSKSQLPSEYKVDREVSTCIYFLMPSGC 60

Query: 61  VSSLHRIPCAETWHFYLGEPLTILELNEEDGRVKLTRLGSDLIGDNQLPQYTVPPNVWFG 120
           VS+LHRIPCAETWHFYLGEPLT+LELNE+DGRVKLT LGSDLIGDNQLPQYTVPPNVWFG
Sbjct: 61  VSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGSDLIGDNQLPQYTVPPNVWFG 120

Query: 121 AFPTKDLSISADGTLTKASPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPASEA 180
           AFPTKD +ISADGTLTKA+PRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFP SEA
Sbjct: 121 AFPTKDFNISADGTLTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSEA 180

Query: 181 LVSLLTPDA 190
            VSLLTP A
Sbjct: 181 FVSLLTPGA 189

[Close]

BLAST of Lag0034628 vs. NCBI nr
Match: TYK10013.1 (Cupin_5 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 362.8 bits (930), Expect = 1.7e-96
Identity = 171/189 (90.48%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MATASEIIAKLDLKPHPEGGFYSETFRDKSVHLSKSHLPSAYKVDREVSTCIYFLVPSGC 60
           MATAS+I+AKL+LKPHPEGGFYSETFRD SVHLSKS LP  YKVDREVSTCIYFL+PSGC
Sbjct: 1   MATASQIVAKLNLKPHPEGGFYSETFRDYSVHLSKSQLPPEYKVDREVSTCIYFLMPSGC 60

Query: 61  VSSLHRIPCAETWHFYLGEPLTILELNEEDGRVKLTRLGSDLIGDNQLPQYTVPPNVWFG 120
           VS+LHRIPCAETWHFYLGEPLT+LELNE+DGRVKLT LGSDLIGDNQLPQYTVPPNVWFG
Sbjct: 61  VSALHRIPCAETWHFYLGEPLTVLELNEKDGRVKLTCLGSDLIGDNQLPQYTVPPNVWFG 120

Query: 121 AFPTKDLSISADGTLTKASPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPASEA 180
           AFPTKD +ISADGTLTKA+PRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFP SEA
Sbjct: 121 AFPTKDFNISADGTLTKAAPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPDSEA 180

Query: 181 LVSLLTPDA 190
            VSLLTP A
Sbjct: 181 FVSLLTPGA 189

[Close]

BLAST of Lag0034628 vs. NCBI nr
Match: XP_022147566.1 (uncharacterized protein LOC111016461 [Momordica charantia])

HSP 1 Score: 360.5 bits (924), Expect = 8.6e-96
Identity = 169/189 (89.42%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 1   MATASEIIAKLDLKPHPEGGFYSETFRDKSVHLSKSHLPSAYKVDREVSTCIYFLVPSGC 60
           MATASEI+AKLDLKPHPEGGFYSETFRD SVHLSK+HLP  YKV REVSTCIYFLVPSGC
Sbjct: 1   MATASEIVAKLDLKPHPEGGFYSETFRDSSVHLSKTHLPPQYKVGREVSTCIYFLVPSGC 60

Query: 61  VSSLHRIPCAETWHFYLGEPLTILELNEEDGRVKLTRLGSDLIGDNQLPQYTVPPNVWFG 120
           VS+LHRIPCAETWHFYLGEPLTILELN+ DGRVKLT LG DLIGDNQLPQYTVPPNVWFG
Sbjct: 61  VSALHRIPCAETWHFYLGEPLTILELNDTDGRVKLTCLGPDLIGDNQLPQYTVPPNVWFG 120

Query: 121 AFPTKDLSISADGTLTKASPRDSENHYSLVGCSCAPAFQFEDFELAKRSDLVSRFPASEA 180
           +FPTKD +ISADGT+TKA+PRDS+NHYSLVGC+CAPAFQFEDFELAKRSDLVSRFP SEA
Sbjct: 121 SFPTKDFTISADGTVTKAAPRDSQNHYSLVGCTCAPAFQFEDFELAKRSDLVSRFPDSEA 180

Query: 181 LVSLLTPDA 190
           LVSLLTP A
Sbjct: 181 LVSLLTPGA 189

The following BLAST results are available for this feature:

BLAST of Lag0034628 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144040.1	1.9e-98	92.06	uncharacterized protein LOC101210771 isoform X1 [Cucumis sativus] >KGN66316.1 hy...	[more]
XP_038878514.1	2.1e-97	90.43	uncharacterized protein LOC120070727 [Benincasa hispida] >XP_038878515.1 unchara...	[more]
XP_008450945.1	4.6e-97	91.01	PREDICTED: uncharacterized protein LOC103492382 [Cucumis melo] >KAA0055762.1 Cup...	[more]
TYK10013.1	1.7e-96	90.48	Cupin_5 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_022147566.1	8.6e-96	89.42	uncharacterized protein LOC111016461 [Momordica charantia]	[more]

BLAST of Lag0034628 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 1..185 e-value: 8.0E-52 score: 177.7
IPR009327	Cupin domain of unknown function DUF985	PFAM	PF06172	Cupin_5	coord: 6..165 e-value: 7.3E-42 score: 142.8
None	No IPR available	PANTHER	PTHR33387:SF5	OS06G0198500 PROTEIN	coord: 3..187
None	No IPR available	CDD	cd06121	cupin_YML079wp	coord: 4..181 e-value: 3.43343E-64 score: 192.757
IPR039935	Uncharacterized protein YML079W-like	PANTHER	PTHR33387	RMLC-LIKE JELLY ROLL FOLD PROTEIN	coord: 3..187
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 2..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034628.1	Lag0034628.1	mRNA