Lag0034578 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0034578
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr3: 8582679 .. 8585959 (-)
RNA-Seq ExpressionLag0034578
SyntenyLag0034578
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTAAGTCAGAAAACGGAAGTAGGAGGGCTAGAGAGTAAGAGGAGAGAGTAGAGAGTTCGGGTCCCCTTCTTCAGTGGCAAAGAGGGGTATAAATATTTGTTCATCCTCCTAGGGTTTTTAGGAGTTCGGAGGCGTTTCGAGACAAACCAGGCAGAACTGGGGCGGCCAGAGGCGGTAGGGACTAAACGGCGCGGGCCGAGGCCGAACAGGGGGTCGGGCTTGGTCTTGGCCCGCCCCACTTGCTGGTTTCGCCTCTTTGGTCCATCTCCCAGTCTGATTTCTCTCCGATTGTCCTCGTCAGCTCCTTGTACATCGAGGTGGTCCAAAATTGTCTATAACACAAATCTTCTTCTTTTTTTTTTGAAGAAAAAGTTCAAATCTCTTATATCCCACATGTTGTTAATATATATATATTAAAAATATGTAGGTTTAATCAAAGGTTTGTAACCAAAGGAAAAGAGCCACTTAAGTATCACGTGTAAAGGGATAACTGCAAATTGTCAAAAAAAAAAAACAAAAGAAGAAGAAGAAGACTGCAAGATTCTAAATATTCATTGATTGGAGGGTAAAGACGGAAGTTTCAGTTGCAAAGATATAAAGTATATAGAGATTTTAAATATTTATATAATAAAAGACATAATGGTGGGACCCACACGTCAAAAGATGAAAGTTTATTCTCTCAGCAATTGGATAAGACCATGTGTATATACATCGGGAATCAAACATCAAGAGGTCGACATTAACCAGAGCATAGTTTAATTGGTATAAAGTTTTTTTTTAAGTATATCAACAATTGAGAATAGAAGATTTGAACATCTGACCTCTTGATCGAAGGTACATGTTAATTACCGCTAAGCTATGTTCGTTTTGGTCAATTGGTATAAAGTTTGTATTTTCTAGAAGTTGATATTGATATATTGAGATTTGAGTTTTACAGATATATCGAAGAAATATTGATATTGATGAATATTTTTGTTTAAATTAATGATTAGGTTGTTTTTAACTTTTCAAATTACTAGTCAAGTAACACGTGCAATGCACGTGGAATCTTATAGTCTTAAATTAAAACAAGAGAAAATAGTAGTTTTTTTAGTATATGTAATGTAACAAAAAAATACCATATAACTTTGTTTTAATTACCATAAACTTTTGAAAGTTAGAGATAAAAATAAAAGATTTCTTATTATATAGTACGTATACAGACATAATAGTAGCACACACGTACATAACACATTTTTTTTTAAATGTAAACTTTGACAATAAGTTTAATAGTTATCTTATAAAAATTTCAAAGTTTAATAATTATCTTATAAAAAATAAAAATAAAAGTGGAAAATACACTTTTAGTCCCTAGGGTTTGAGTTAGGTTTCATTTTGGTCCCTGAGTTTTCAAACTCAACCGTTTAGCCCCTGAGGTTTGGTTTTAGTTTCATTTTGGTCTTGTCGGTTTTGTGCAATTTTTTATTAGGGTTTGATGTTTGGGGAAGAAAAGATGAATGAAGAAAAGAAAAGAAAAAATAAAAAAAATTAATATATATATATATATATTTAATAAAAACTAATGTCACGTCAACTACCTGTAGAAAATTTACGGAGGGACTAAAAACGTAAAGAAAATCAAACCTCAGGAGCTAAATTGTTGAGTTTGAAAACTCATGGACCAAAATGAAACCTAACCCAAACCTTAAGGACCAAAAGTATATTTTTCCCTAAAATAAACAACTCGGGTTCTAGTACTAAAGAAAGCATAAACTCCAATGTTTAAAACTCTTGGAAAATCATTTATGCTATAATTAAGCATTCTAAATTCAAAATACAACAAACAAAAGTAATATCTGAGGCACATTGAAATTCGATACTATAATTTTAAACAACTAAATTTGTTGGGAATATAATTAAATTTTATTAAATACAAAATTTAAAATGTTAAGATCTTAAAATGTGTATTGCAATTTTAAAAAAATATATTTATTTACATGAATTTATGATTTATCCAAAATTGTATTTACTTCAAAAAATTGATGTAGATGTAAGTAACATTTGATTACATTATAAATATAAAAAATGATAGATAACAAAACTTCTTTATCGACAAAAATAAAATTTTGAATTCTCAAGGTTTTATTGTGACAGGGTTCACGACCAAAATACATCAAGTATATATTTCAAGGTTTTGTCAATTTTATATTTTCTTTTTATACATGGATCACACCTATACACAAATAAATATATGAACAGTTGCACGAATAACCATCTTCATATGAAACAGTTGCACGTCGACATCAATTGTACCTATTGGACACAACCAAAATAACACCTTAGTGTGACACGGTTCAATAGTGTTTCCCTCACGAATAACACAAATGTGTATTTATTTTTTTTTTTTGAAAATCTTGAGTTCTCTTATAAAATAAGAAACTTTCCAATAGTTTGACATTTTTTTCAATTATATATTTTCTTCTTATACATGGATCGCACCTATACATGAATAGATACAACAATTCAATGTGTAACCATCTCCATGTGAACAGTCGCATCCCGTCGACATCAATTGTACCTATTGGATAAAATTTCATATAGTTTGACATTTAACCATCTTTACACGAACAGTCGCATCCCGTCGACATTAATTGCACCTATTGGATTGAATGGACACTTATACTTGAAGGGTAGCGTCTCATAGCAAAGGACAAAATAGGAATTTACTTAAAAAGTAAGGGCATAAGAGGAAATGAAAAATTCTCCCCCCTTAGCCTCTTTTATATATAGTATAGATTACTAAAGTTAAATAGATGACATTGTTTATAGTTTAGAAGTACTTGTTATAGGTAATTTTGGACCACCACAGCGTACGAGGAGCAGACAGGACAACCGGGAGGAGATAGGACCAGGAAAGGGACCCAGAGGGAGACCATACCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCCGTTTGCACGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCCCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGTATTTATACCCCTCTTCGCCATTGAAGAAGGGGGCCGAAAATCCGATTCTTGACTTCTTTCTCTATTCTCTAGCTGCTCAGTTTCCTGACTTAGGCATCGGAGGTGGTGTGGCCTACACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCCCAGCTTCTACAAATTCATTGTTGGTGTCACGTGA

mRNA sequence

ATGCTTAAGTCAGAAAACGGAAGAGTTCGGAGGCGTTTCGAGACAAACCAGGCAGAACTGGGGCGGCCAGAGGCGGTAGGGACTAAACGGCGCGGGCCGAGGCCGAACAGGGGGTCGGGCTTGGTCTTGGCCCGCCCCACTTGCTGGTTTCGCCTCTTTGGTCCATCTCCCAGTCTGATTTCTCTCCGATTGTCCTCGTCAGCTCCTTGTAATTTTGGACCACCACAGCGTACGAGGAGCAGACAGGACAACCGGGAGGAGATAGGACCAGGAAAGGGACCCAGAGGGAGACCATACCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCCGTTTGCACGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCCCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGTATTTATACCCCTCTTCGCCATTGAAGAAGGGGGCCGAAAATCCGATTCTTGACTTCTTTCTCTATTCTCTAGCTGCTCAGTTTCCTGACTTAGGCATCGGAGGTGGTGTGGCCTACACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCCCAGCTTCTACAAATTCATTGTTGGTGTCACGTGA

Coding sequence (CDS)

ATGCTTAAGTCAGAAAACGGAAGAGTTCGGAGGCGTTTCGAGACAAACCAGGCAGAACTGGGGCGGCCAGAGGCGGTAGGGACTAAACGGCGCGGGCCGAGGCCGAACAGGGGGTCGGGCTTGGTCTTGGCCCGCCCCACTTGCTGGTTTCGCCTCTTTGGTCCATCTCCCAGTCTGATTTCTCTCCGATTGTCCTCGTCAGCTCCTTGTAATTTTGGACCACCACAGCGTACGAGGAGCAGACAGGACAACCGGGAGGAGATAGGACCAGGAAAGGGACCCAGAGGGAGACCATACCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCCGTTTGCACGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCCCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGTATTTATACCCCTCTTCGCCATTGAAGAAGGGGGCCGAAAATCCGATTCTTGACTTCTTTCTCTATTCTCTAGCTGCTCAGTTTCCTGACTTAGGCATCGGAGGTGGTGTGGCCTACACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCCCAGCTTCTACAAATTCATTGTTGGTGTCACGTGA

Protein sequence

MLKSENGRVRRRFETNQAELGRPEAVGTKRRGPRPNRGSGLVLARPTCWFRLFGPSPSLISLRLSSSAPCNFGPPQRTRSRQDNREEIGPGKGPRGRPYRRAGPTWPDPYGRPRPVCTGRVRLPPLGPYRFQLPRSSLLRPRTPPNPRSPSRYLYPSSPLKKGAENPILDFFLYSLAAQFPDLGIGGGVAYTTPVSSDSCWSCRSRLPSFYKFIVGVT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0034578.1Lag0034578.1mRNA