Lag0034487 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034487
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	mitochondrial import inner membrane translocase subunit TIM17-2-like
Location	chr3: 7784434 .. 7785108 (+)
RNA-Seq Expression	Lag0034487
Synteny	Lag0034487

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACGCCGGAGACTTCACGGGAGCCTTGTCCAGATCGGATCCTCGATGACATCGGCGGCGCCTTCGGCATGGGCGCCGTCGGTGGTTCCGCCTTCCACTTTCTCAAAGGCGTCTACAGTTCCCCTAAAGGCGCTCGCCTTCTTGGCGGCTCTCAAGCCGTCCGAATGAACGCGCCTCGTATCGGCGGCAGCTTTGCCGTATGGGGCGGCTTGTTCTCCTCCTTCGATTGCTCCATGGTTTACCTCCGCCAGAAGGAAGATCCATGGAACTCGATCATAGCCGGTGCCGCTACCGGCGGCTTCCTCCAGATGCGTCAGGGCTTCGGCGCCTCCGCCCGCTCGGCTTTGTTCGGCGGTGTTCTGTTGGCTCTGATCGAGGGGGCCGGGATCATGCTGAATAAGGTGCTTAGTCAACCGCAGAACGCTCCTATCATGATCGACGACGCCGGTGCCATGGGCGGCCTCCCTGGTTACCCTATGGACCAGATTCCGGGTCTAACGCCGCCGCAGACGGCGGCTGCGAGTTCGGGATCTTCAGGTGCGGGTTCGGGATCGTGGTTCGGAGGATGGTTCGGTGGCGGACAGAAAAAGGATACAGAGGCAAGAGACAGCGAAACGAAGATTTTGGAGAGCTTTGATTCGCCGCCGGTGCCGAATTTCGAGTACAAGTAA

mRNA sequence

ATGGGAACGCCGGAGACTTCACGGGAGCCTTGTCCAGATCGGATCCTCGATGACATCGGCGGCGCCTTCGGCATGGGCGCCGTCGGTGGTTCCGCCTTCCACTTTCTCAAAGGCGTCTACAGTTCCCCTAAAGGCGCTCGCCTTCTTGGCGGCTCTCAAGCCGTCCGAATGAACGCGCCTCGTATCGGCGGCAGCTTTGCCGTATGGGGCGGCTTGTTCTCCTCCTTCGATTGCTCCATGGTTTACCTCCGCCAGAAGGAAGATCCATGGAACTCGATCATAGCCGGTGCCGCTACCGGCGGCTTCCTCCAGATGCGTCAGGGCTTCGGCGCCTCCGCCCGCTCGGCTTTGTTCGGCGGTGTTCTGTTGGCTCTGATCGAGGGGGCCGGGATCATGCTGAATAAGGTGCTTAGTCAACCGCAGAACGCTCCTATCATGATCGACGACGCCGGTGCCATGGGCGGCCTCCCTGGTTACCCTATGGACCAGATTCCGGGTCTAACGCCGCCGCAGACGGCGGCTGCGAGTTCGGGATCTTCAGGTGCGGGTTCGGGATCGTGGTTCGGAGGATGGTTCGGTGGCGGACAGAAAAAGGATACAGAGGCAAGAGACAGCGAAACGAAGATTTTGGAGAGCTTTGATTCGCCGCCGGTGCCGAATTTCGAGTACAAGTAA

Coding sequence (CDS)

ATGGGAACGCCGGAGACTTCACGGGAGCCTTGTCCAGATCGGATCCTCGATGACATCGGCGGCGCCTTCGGCATGGGCGCCGTCGGTGGTTCCGCCTTCCACTTTCTCAAAGGCGTCTACAGTTCCCCTAAAGGCGCTCGCCTTCTTGGCGGCTCTCAAGCCGTCCGAATGAACGCGCCTCGTATCGGCGGCAGCTTTGCCGTATGGGGCGGCTTGTTCTCCTCCTTCGATTGCTCCATGGTTTACCTCCGCCAGAAGGAAGATCCATGGAACTCGATCATAGCCGGTGCCGCTACCGGCGGCTTCCTCCAGATGCGTCAGGGCTTCGGCGCCTCCGCCCGCTCGGCTTTGTTCGGCGGTGTTCTGTTGGCTCTGATCGAGGGGGCCGGGATCATGCTGAATAAGGTGCTTAGTCAACCGCAGAACGCTCCTATCATGATCGACGACGCCGGTGCCATGGGCGGCCTCCCTGGTTACCCTATGGACCAGATTCCGGGTCTAACGCCGCCGCAGACGGCGGCTGCGAGTTCGGGATCTTCAGGTGCGGGTTCGGGATCGTGGTTCGGAGGATGGTTCGGTGGCGGACAGAAAAAGGATACAGAGGCAAGAGACAGCGAAACGAAGATTTTGGAGAGCTTTGATTCGCCGCCGGTGCCGAATTTCGAGTACAAGTAA

Protein sequence

MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAPRIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGGVLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSSGAGSGSWFGGWFGGGQKKDTEARDSETKILESFDSPPVPNFEYK

Homology

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BLAST of Lag0034487 vs. NCBI nr
Match: XP_038878607.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Benincasa hispida])

HSP 1 Score: 429.1 bits (1102), Expect = 2.3e-116
Identity = 211/226 (93.36%), Postives = 220/226 (97.35%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKG+YSSPKGARLLGGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM G+PGYP+DQIPGLTPP+T++AS GSS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPVDQIPGLTPPETSSASPGSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
           GAGSGSWFGGWFGGGQKKD+EA   D ETKILESFDSPPVPNFE+K
Sbjct: 181 GAGSGSWFGGWFGGGQKKDSEANRGDGETKILESFDSPPVPNFEFK 226

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BLAST of Lag0034487 vs. NCBI nr
Match: XP_022961015.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita moschata])

HSP 1 Score: 423.7 bits (1088), Expect = 9.9e-115
Identity = 211/226 (93.36%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGG+PGYPMDQIPGL  PQT+ AS GSS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQTSGASPGSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
            AGS SWFGGWFGGGQKKD+EA   +S+TKILESFDSPPVPNFEYK
Sbjct: 181 NAGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

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BLAST of Lag0034487 vs. NCBI nr
Match: KAG7023615.1 (Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422.5 bits (1085), Expect = 2.2e-114
Identity = 210/226 (92.92%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGG+PGYPMDQIPGL  PQT+ AS GSS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQTSGASPGSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
            +GS SWFGGWFGGGQKKD+EA   +S+TKILESFDSPPVPNFEYK
Sbjct: 181 NSGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

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BLAST of Lag0034487 vs. NCBI nr
Match: XP_023516392.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.2 bits (1084), Expect = 2.9e-114
Identity = 210/226 (92.92%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGG+PGYPMDQIPGL  PQ++ AS GSS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQSSGASPGSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
            AGS SWFGGWFGGGQKKD+EA   +S+TKILESFDSPPVPNFEYK
Sbjct: 181 NAGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

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BLAST of Lag0034487 vs. NCBI nr
Match: KAG6589953.1 (Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421.0 bits (1081), Expect = 6.4e-114
Identity = 209/226 (92.48%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGA+GG+PGYPMDQIPGL  PQT+ AS GSS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAIGGVPGYPMDQIPGLATPQTSGASPGSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
            +GS SWFGGWFGGGQKKD+EA   +S+TKILESFDSPPVPNFEYK
Sbjct: 181 NSGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

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BLAST of Lag0034487 vs. ExPASy Swiss-Prot
Match: Q9SP35 (Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana OX=3702 GN=TIM17-2 PE=1 SV=2)

HSP 1 Score: 305.8 bits (782), Expect = 3.9e-82
Identity = 159/245 (64.90%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHF+KG Y+SPKG+R +GG+Q+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           R GGSFAVWGGLFS+FDC+MVYLRQKEDPWNSIIAGAATGGFL MRQG GA++RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMG--------GLPGYP-MDQIPGLTPPQ 180
           VLLALIEGAGIMLNKVL+QPQN  +M++D G  G        G+PG P M  +PG+   Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 TAAASS------------GSSGAGSGSWFGGWFGGGQKKDTEARDSETKILESFDSPPVP 225
                S             +S + S SWFGG F   +++     +S+T++LESFD+PPVP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLFDKKKEEVQPGSESKTEVLESFDAPPVP 240

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BLAST of Lag0034487 vs. ExPASy Swiss-Prot
Match: Q9LN27 (Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis thaliana OX=3702 GN=TIM17-1 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 6.7e-74
Identity = 147/226 (65.04%), Postives = 173/226 (76.55%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGSA+H ++G+Y+SP GARL GG QA+RM+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           R GGSF+VWGGL+S+FDC++VY RQKEDPWNSI++GAATGGFL +RQG GASARSAL GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLA+IEG GIMLNKV S   N   M D A     LP Y M QI G + P      + SS
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAAT--SLP-YGMGQISGQSVP---VPETSSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEARDSE--TKILESFDSPPVPNFEYK 225
            +GS SWFG  F   +KK+TE   SE  T ILESFD+PPVP +E+K
Sbjct: 181 SSGSVSWFGSLF--KKKKETEDHHSESRTHILESFDAPPVPTYEFK 218

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BLAST of Lag0034487 vs. ExPASy Swiss-Prot
Match: O60830 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens OX=9606 GN=TIMM17B PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.9e-40
Identity = 89/167 (53.29%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGA--RLLGGSQAVRMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   RL G + AVR+ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGGVL 124
           GGSFAVWGGLFS+ DC +V LR KEDPWNSI +GA TG  L  R G  A   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQP-QNAPIMIDDAGAM-----GGLPGYPMDQ 164
           LALIEG GI+L +  +Q  +NAP  ++D   +        PGYP  Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQ 169

[Close]

BLAST of Lag0034487 vs. ExPASy Swiss-Prot
Match: Q2HJE9 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Bos taurus OX=9913 GN=TIMM17B PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.8e-39
Identity = 89/167 (53.29%), Postives = 109/167 (65.27%), Query Frame = 0


Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGA--RLLGGSQAVRMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   RL G   AVR+ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGGVL 124
           GGSFAVWGGLFS+ DC +V LR KEDPWNSI +GA TG  L  R    A   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSVPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQP-QNAPIMIDDAGAMGGL-----PGYPMDQ 164
           LALIEG GI+L +  +Q  +NAP  ++D G +        PGYP  Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPGQLPSKEGTPGPGYPSYQ 169

[Close]

BLAST of Lag0034487 vs. ExPASy Swiss-Prot
Match: Q9Z0V7 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus OX=10090 GN=Timm17b PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.1e-39
Identity = 87/164 (53.05%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGA--RLLGGSQAVRMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   R  G   AVR+ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGGVL 124
           GGSFAVWGGLFS+ DC +V LR KEDPWNSI +GA TG  L  R G  A   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQP-QNAPIMIDDAGAM-----GGLPGYP 161
           LALIEG GI+L +  +Q  +NAP  ++D   +        PGYP
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLTPKEGSPAPGYP 166

[Close]

BLAST of Lag0034487 vs. ExPASy TrEMBL
Match: A0A6J1HAR7 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111461647 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.8e-115
Identity = 211/226 (93.36%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGG+PGYPMDQIPGL  PQT+ AS GSS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQTSGASPGSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
            AGS SWFGGWFGGGQKKD+EA   +S+TKILESFDSPPVPNFEYK
Sbjct: 181 NAGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

[Close]

BLAST of Lag0034487 vs. ExPASy TrEMBL
Match: A0A6J1JFI2 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485270 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.0e-113
Identity = 210/226 (92.92%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPK ARLLGGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKSARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGG+PGYPMDQIPGLT PQT+  S  SS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTTPQTSGESLESS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
            AGS SWFGGWFGGGQKKD+EA   D ETKILESFDSPPVPNFEYK
Sbjct: 181 HAGSESWFGGWFGGGQKKDSEATRGDGETKILESFDSPPVPNFEYK 226

[Close]

BLAST of Lag0034487 vs. ExPASy TrEMBL
Match: A0A5D3CFZ3 (Mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002920 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.6e-113
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKG+YSSPKGARLLGGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQG GASARSALFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM G+PGYPMDQIPGLTPP T++AS GSS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPMDQIPGLTPPGTSSASPGSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
            A SGSWFGG FGGGQKKD+EA   D ETKILESFDSPPVPNFE+K
Sbjct: 181 DASSGSWFGGLFGGGQKKDSEANRGDGETKILESFDSPPVPNFEFK 226

[Close]

BLAST of Lag0034487 vs. ExPASy TrEMBL
Match: A0A6J1CUQ0 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Momordica charantia OX=3673 GN=LOC111014515 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.6e-113
Identity = 210/229 (91.70%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQA+RMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQGF ASARSA+FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQT---AAASS 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGG+PGYPMDQIPGLTPPQT   AA+S 
Sbjct: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPHAASSP 180

Query: 181 GSSGAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
           GSS  GSGSWFGGWFGGGQKKD+EA   D ETKILESFDSPPVPNFEYK
Sbjct: 181 GSS--GSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 227

[Close]

BLAST of Lag0034487 vs. ExPASy TrEMBL
Match: A0A1S3BPZ0 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis melo OX=3656 GN=LOC103492263 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.6e-113
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKG+YSSPKGARLLGGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           RIGGSFAVWGGLFS+FDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQG GASARSALFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM G+PGYPMDQIPGLTPP T++AS GSS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPMDQIPGLTPPGTSSASPGSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEAR--DSETKILESFDSPPVPNFEYK 225
            A SGSWFGG FGGGQKKD+EA   D ETKILESFDSPPVPNFE+K
Sbjct: 181 DASSGSWFGGLFGGGQKKDSEANRGDGETKILESFDSPPVPNFEFK 226

[Close]

BLAST of Lag0034487 vs. TAIR 10
Match: AT2G37410.1 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 305.8 bits (782), Expect = 2.8e-83
Identity = 159/245 (64.90%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHF+KG Y+SPKG+R +GG+Q+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           R GGSFAVWGGLFS+FDC+MVYLRQKEDPWNSIIAGAATGGFL MRQG GA++RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMG--------GLPGYP-MDQIPGLTPPQ 180
           VLLALIEGAGIMLNKVL+QPQN  +M++D G  G        G+PG P M  +PG+   Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 TAAASS------------GSSGAGSGSWFGGWFGGGQKKDTEARDSETKILESFDSPPVP 225
                S             +S + S SWFGG F   +++     +S+T++LESFD+PPVP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLFDKKKEEVQPGSESKTEVLESFDAPPVP 240

[Close]

BLAST of Lag0034487 vs. TAIR 10
Match: AT2G37410.2 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 305.8 bits (782), Expect = 2.8e-83
Identity = 159/245 (64.90%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHF+KG Y+SPKG+R +GG+Q+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           R GGSFAVWGGLFS+FDC+MVYLRQKEDPWNSIIAGAATGGFL MRQG GA++RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMG--------GLPGYP-MDQIPGLTPPQ 180
           VLLALIEGAGIMLNKVL+QPQN  +M++D G  G        G+PG P M  +PG+   Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 TAAASS------------GSSGAGSGSWFGGWFGGGQKKDTEARDSETKILESFDSPPVP 225
                S             +S + S SWFGG F   +++     +S+T++LESFD+PPVP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLFDKKKEEVQPGSESKTEVLESFDAPPVP 240

[Close]

BLAST of Lag0034487 vs. TAIR 10
Match: AT1G20350.1 (translocase inner membrane subunit 17-1 )

HSP 1 Score: 278.5 bits (711), Expect = 4.8e-75
Identity = 147/226 (65.04%), Postives = 173/226 (76.55%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGSA+H ++G+Y+SP GARL GG QA+RM+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           R GGSF+VWGGL+S+FDC++VY RQKEDPWNSI++GAATGGFL +RQG GASARSAL GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGLPGYPMDQIPGLTPPQTAAASSGSS 180
           VLLA+IEG GIMLNKV S   N   M D A     LP Y M QI G + P      + SS
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAAT--SLP-YGMGQISGQSVP---VPETSSS 180

Query: 181 GAGSGSWFGGWFGGGQKKDTEARDSE--TKILESFDSPPVPNFEYK 225
            +GS SWFG  F   +KK+TE   SE  T ILESFD+PPVP +E+K
Sbjct: 181 SSGSVSWFGSLF--KKKKETEDHHSESRTHILESFDAPPVPTYEFK 218

[Close]

BLAST of Lag0034487 vs. TAIR 10
Match: AT5G11690.1 (translocase inner membrane subunit 17-3 )

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-35
Identity = 72/126 (57.14%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60
           M T + S+E    RI++ IG AFG GAVGGS +HF++G Y+SP GAR +GG+QA  MNAP
Sbjct: 1   MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60

Query: 61  RIGGSFAVWGGLFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120
           R+GG+FAV+GGL S+FD ++V +R+KEDPWNSI+AGAATGG L +R+G  A++ SA+  G
Sbjct: 61  RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120

Query: 121 VLLALI 127
             LA++
Sbjct: 121 FFLAVL 126

[Close]

BLAST of Lag0034487 vs. TAIR 10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23 )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 30/110 (27.27%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 20  GGAFGMGAVGGSAFHFLKGVYSSPKG-------ARLLGGS-QAVRMNAPRIGGSFAVWGG 79
           G  +  G+V G++     G+ S   G        R+L  S QA R    R+G    + G 
Sbjct: 64  GTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVG----IVGL 123

Query: 80  LFSSFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGGV 122
           +++  +  +V +  K+D W S++AG  TG   +  +G  ++A +  FGG+
Sbjct: 124 IYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGI 169

The following BLAST results are available for this feature:

BLAST of Lag0034487 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878607.1	2.3e-116	93.36	mitochondrial import inner membrane translocase subunit TIM17-2-like [Benincasa ...	[more]
XP_022961015.1	9.9e-115	93.36	mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ...	[more]
KAG7023615.1	2.2e-114	92.92	Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurb...	[more]
XP_023516392.1	2.9e-114	92.92	mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ...	[more]
KAG6589953.1	6.4e-114	92.48	Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurb...	[more]

BLAST of Lag0034487 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SP35	3.9e-82	64.90	Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis t...	[more]
Q9LN27	6.7e-74	65.04	Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis t...	[more]
O60830	4.9e-40	53.29	Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens ...	[more]
Q2HJE9	1.8e-39	53.29	Mitochondrial import inner membrane translocase subunit Tim17-B OS=Bos taurus OX...	[more]
Q9Z0V7	4.1e-39	53.05	Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus ...	[more]

BLAST of Lag0034487 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAR7	4.8e-115	93.36	mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit...	[more]
A0A6J1JFI2	2.0e-113	92.92	mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit...	[more]
A0A5D3CFZ3	7.6e-113	92.04	Mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis ...	[more]
A0A6J1CUQ0	7.6e-113	91.70	mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Momordic...	[more]
A0A1S3BPZ0	7.6e-113	92.04	mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis ...	[more]

BLAST of Lag0034487 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37410.1	2.8e-83	64.90	translocase inner membrane subunit 17-2	[more]
AT2G37410.2	2.8e-83	64.90	translocase inner membrane subunit 17-2	[more]
AT1G20350.1	4.8e-75	65.04	translocase inner membrane subunit 17-1	[more]
AT5G11690.1	1.3e-35	57.14	translocase inner membrane subunit 17-3	[more]
AT1G17530.1	1.5e-04	27.27	translocase of inner mitochondrial membrane 23	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 16..122 e-value: 1.4E-26 score: 93.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..184
None	No IPR available	PANTHER	PTHR10485:SF23	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM17-2-LIKE	coord: 1..224
None	No IPR available	PANTHER	PTHR10485	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17	coord: 1..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034487.1	Lag0034487.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex
molecular_function	GO:0008320	protein transmembrane transporter activity