Lag0034316 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034316
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Phytocyanin domain-containing protein
Location	chr3: 6273265 .. 6275191 (-)
RNA-Seq Expression	Lag0034316
Synteny	Lag0034316

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATTGGGATAGTTTTTCTGGTGGTGGTGGCGGCGACCACCGTGCTCTATGCGGTGGAGGCGGCGGAGTTCAAGGTCGGAGGTGACAGTGGTTGGGGCCGTCCTCCTAGCTCCGACTTCTATTCTTCTTGGGCTGCTGGCCAAAATTTCAGCGTGGGCGATGTCCTAGGTTTCATTTGTTGCTTCTCCATATTTCCTTTTAATTGTTTTAAATCTCGTTTTGTAATTTGAAAATTGTTACTTTTAGGCTCATTTGATAATTGATTTTTGGTTTTTGAAAATCAAACTTGTTTTCTCCCGACTTTCTTACAATGGTTTTCGTATTTGTTAAGGAAGTGAATTATTTCCCAAAAAACAGAAATAAGTTTATTATTATTATTATTATTATTATTATTATTATTTTGTTTAGTCTTCATAACTTGAGTTGGTGTTTGAAAACATGTGAAGAAGGTAGATAACAAACCAAAGAAATGTATAGGAAGTAGATAAGCTAAATTTTCAAATATAAAAATTTAAAAATCAAATGGTTATCAGAGCCTTTAATTTTCAATTTTTAGGAGGAGAAAATAATGATGTAAAGGAGTATCTATTTTTATTTTAAAATTTTAATTTCATCAAATTGCGCCTTTAAATTGAGATAAATAATCCAAAACTTGAGTAAGTATTATATAATTTTTATCTTTAAAAGATTTTAATTCAAAGAAGGGTGAAAAATGATATTTTCACATGCATCAATCAATTTAAAAATATATATATATACATTTTTCTACAAAATTGAAGATATTTCAAGAAGAATATGACACCAGAGTTGAGCTTGGTTTCGGGAAAATTTTGTTTTCCTTGAAAAAACCAATCATTTTGATCCTCATTTTAATTTTGCTCTTGACATATGGATAGACCACATAAATAAATTCTGATAAAAGGAAGGCATTCGAAAAGTAGATAACAAAAATGATAAAAAAATAATCCTAAGAATCAAAATGATTATTATTGTTTTTTTTATGTTCAAAACCAAACCACTCATTATCTCTTAATCTAGGATATATAGTTTAAACAGGTGAATTATAGTTGTTTATTAGATTGGGACACGTGATTACATTAGGGGAAGAGTGCACCATAATGGGTGGTTTTCGTTTCTTTTTTTTTTTTTTAGGCTGACCCTCCGATCCGTGTGTGGAGGGCGCAGTTTTTATCTGATTTACCGTTGTATTGTTGCTCTCTGAGCGGTTCTCTTGGTGGTATGGATGCGTTCTTTTGCTTAAAAAAAAAACAGGTGAATTATTTTCAAATGAATACGGACTTAAATTAAGAAACTAAAATAACAAAGTCTTTTGATGGAGAAAAAAAAATAACAAATATTTAAAATTTTTAAAGATGGAAAAATAGAGTAATGTTTTCTTTAAAAGGAAAAAGAACTAGAATAATCTTAAACTTTAGTACCAAATTGAGGCTGATTGATGATTATTATTTAAAAACATATATACCTCTGATTAATTATGATTATTTGTCTGTCTTTTTTTTTTTTTTTTTTTTTGAAGTATTCGATTTTCCAACGGGAGGACACGACGTTGCCGGAGTAACAAAGGACGGTTACGACAACTGCAACACCGACAACCCCAAATTCGTAAACAGCACAACACCCTTCTCTTTCACTCTCGATACGCCCACCGATTTCTATTTCATCTGCACCGTCCCCGGCCACTGCGCCGCCGGCCAGAAATTGGCCATCACCACCCTCCAACAACCGTCTTCCTCCTCTGCGCCGCCGCCACCTGCCTCCCCCGACAATTCTCCCCCTCTTTCCGTTGACGAGCCACCCACCACGACCTTGCCTCCGCCGCCGCCAAACTCTGCCTCCACTGCTATTGCCTCCATCTTCACCGTTGCCTTCGCCGCCGTCGCTGCCACGTTGATAATATTTTAA

mRNA sequence

ATGAGAATTGGGATAGTTTTTCTGGTGGTGGTGGCGGCGACCACCGTGCTCTATGCGGTGGAGGCGGCGGAGTTCAAGGTCGGAGGTGACAGTGGTTGGGGCCGTCCTCCTAGCTCCGACTTCTATTCTTCTTGGGCTGCTGGCCAAAATTTCAGCGTGGGCGATGTCCTAGTATTCGATTTTCCAACGGGAGGACACGACGTTGCCGGAGTAACAAAGGACGGTTACGACAACTGCAACACCGACAACCCCAAATTCGTAAACAGCACAACACCCTTCTCTTTCACTCTCGATACGCCCACCGATTTCTATTTCATCTGCACCGTCCCCGGCCACTGCGCCGCCGGCCAGAAATTGGCCATCACCACCCTCCAACAACCGTCTTCCTCCTCTGCGCCGCCGCCACCTGCCTCCCCCGACAATTCTCCCCCTCTTTCCGTTGACGAGCCACCCACCACGACCTTGCCTCCGCCGCCGCCAAACTCTGCCTCCACTGCTATTGCCTCCATCTTCACCGTTGCCTTCGCCGCCGTCGCTGCCACGTTGATAATATTTTAA

Coding sequence (CDS)

ATGAGAATTGGGATAGTTTTTCTGGTGGTGGTGGCGGCGACCACCGTGCTCTATGCGGTGGAGGCGGCGGAGTTCAAGGTCGGAGGTGACAGTGGTTGGGGCCGTCCTCCTAGCTCCGACTTCTATTCTTCTTGGGCTGCTGGCCAAAATTTCAGCGTGGGCGATGTCCTAGTATTCGATTTTCCAACGGGAGGACACGACGTTGCCGGAGTAACAAAGGACGGTTACGACAACTGCAACACCGACAACCCCAAATTCGTAAACAGCACAACACCCTTCTCTTTCACTCTCGATACGCCCACCGATTTCTATTTCATCTGCACCGTCCCCGGCCACTGCGCCGCCGGCCAGAAATTGGCCATCACCACCCTCCAACAACCGTCTTCCTCCTCTGCGCCGCCGCCACCTGCCTCCCCCGACAATTCTCCCCCTCTTTCCGTTGACGAGCCACCCACCACGACCTTGCCTCCGCCGCCGCCAAACTCTGCCTCCACTGCTATTGCCTCCATCTTCACCGTTGCCTTCGCCGCCGTCGCTGCCACGTTGATAATATTTTAA

Protein sequence

MRIGIVFLVVVAATTVLYAVEAAEFKVGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVFDFPTGGHDVAGVTKDGYDNCNTDNPKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKLAITTLQQPSSSSAPPPPASPDNSPPLSVDEPPTTTLPPPPPNSASTAIASIFTVAFAAVAATLIIF

Homology

[Close]

BLAST of Lag0034316 vs. NCBI nr
Match: XP_038878561.1 (umecyanin-like [Benincasa hispida])

HSP 1 Score: 234.6 bits (597), Expect = 7.0e-58
Identity = 125/185 (67.57%), Postives = 144/185 (77.84%), Query Frame = 0


Query: 1   MRIGIVFLVVVAATTVLYAVEAAEFKVGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVFD 60
           MRIGIVFLV V ATTV +  EA E  VGGD GW RP S DFYS WAAG NF+VGDVLVF 
Sbjct: 1   MRIGIVFLVTVVATTVRHVAEAIEIHVGGDGGWLRPSSPDFYSLWAAGLNFTVGDVLVFS 60

Query: 61  FPTGGHDVAGVTKDGYDNCNTDNPKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKLA 120
           F TG H+VAGVTKDGYDNCNT NPKF+N+T+PFSFTL+T  DFYFICTVPGHC+AGQKLA
Sbjct: 61  FQTGAHNVAGVTKDGYDNCNTSNPKFLNTTSPFSFTLETLDDFYFICTVPGHCSAGQKLA 120

Query: 121 ITTLQQPSSSSAPPPPASPDNSPPLSVDEPPTTTLPPPPPNSASTAIASIFTVAFAAVAA 180
           IT +QQ     +PPP +SP +SPP+S + PP     PPPPNS +  +ASIFTVA  ++A 
Sbjct: 121 ITNVQQ-----SPPPGSSPPDSPPVSGEMPPPVVTAPPPPNSVTRTMASIFTVALVSIAV 180

Query: 181 TLIIF 186
           TLII+
Sbjct: 181 TLIIY 180

[Close]

BLAST of Lag0034316 vs. NCBI nr
Match: XP_008443977.1 (PREDICTED: umecyanin-like [Cucumis melo] >KAA0050151.1 umecyanin-like [Cucumis melo var. makuwa] >TYK06407.1 umecyanin-like [Cucumis melo var. makuwa])

HSP 1 Score: 221.1 bits (562), Expect = 8.0e-54
Identity = 118/187 (63.10%), Postives = 148/187 (79.14%), Query Frame = 0


Query: 3   IGIVFLVVVAATTVLYAVEAAEFKVGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVFDFP 62
           +GIV++V + A TVL A EA    VGGDSGW RPP+ +FYSSWAAG NF VGD+LVF+F 
Sbjct: 4   VGIVYVVALVAITVLQAAEAVVIPVGGDSGWIRPPNPNFYSSWAAGLNFIVGDILVFNFA 63

Query: 63  TGGHDVAGVTKDGYDNCNTDNPKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKLAIT 122
           TGGHDVAGVTKDGYDNCNT+NP F+N+T+PFSFTLD   DF+FICT+PGHC+AGQKLAIT
Sbjct: 64  TGGHDVAGVTKDGYDNCNTNNPIFLNTTSPFSFTLDKLEDFFFICTIPGHCSAGQKLAIT 123

Query: 123 TLQQ---PSSSSAPPPPAS-PDNSPPLSVDEPPTTTLPPPPPNSASTAIASIFTVAFAAV 182
            LQQ   P+S ++PP   + P  +PP S + PP ++  PPPPNSA++ +ASIFTVAF ++
Sbjct: 124 NLQQSPPPTSPNSPPVSGNEPPPTPPASPNSPPVSSEMPPPPNSATSIMASIFTVAFVSI 183

Query: 183 AATLIIF 186
           A + II+
Sbjct: 184 AVSFIIY 190

[Close]

BLAST of Lag0034316 vs. NCBI nr
Match: XP_004150037.1 (cucumber peeling cupredoxin-like [Cucumis sativus] >KGN65338.1 hypothetical protein Csa_020086 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 3.4e-52
Identity = 121/197 (61.42%), Postives = 148/197 (75.13%), Query Frame = 0


Query: 3   IGIVFLVVVAATTVLYAVEAAEFKVGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVFDFP 62
           +GIVF+V + ATTVL A EA    VGGDSGW RPP+SDFYSSWAAG  F+VGD+LVF+F 
Sbjct: 4   VGIVFVVALVATTVLQAAEAVVIPVGGDSGWIRPPNSDFYSSWAAGLKFTVGDILVFNFM 63

Query: 63  TGGHDVAGVTKDGYDNCNTDNPKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKLAIT 122
            G HDVAGVTK+GYDNC T +P F+N+T+PFSFTLD   D++FICT+PGHC+AGQKLAIT
Sbjct: 64  AGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDYFFICTIPGHCSAGQKLAIT 123

Query: 123 TLQQ---PSSSSAPP---------PPASPDNSPPLSVDEPPTTTL--PPPPPNSASTAIA 182
            LQQ   P+S S PP         PPASPD SPP+S + PP   +   PPPPNSA++ + 
Sbjct: 124 NLQQSPPPTSPSTPPVPGNEPTPTPPASPD-SPPISNEMPPPVPVIAAPPPPNSATSIVG 183

Query: 183 SIFTVAFAAVAATLIIF 186
           SIFTVAF ++A + II+
Sbjct: 184 SIFTVAFVSIAVSFIIY 199

[Close]

BLAST of Lag0034316 vs. NCBI nr
Match: XP_008444048.1 (PREDICTED: umecyanin-like [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-40
Identity = 106/186 (56.99%), Postives = 134/186 (72.04%), Query Frame = 0


Query: 1   MRIGIVFLV-VVAATTVLYAVEAAEFKVGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVF 60
           MRIGIVFLV  VAATTVL+  EA E  +GG SGW RP   ++YS+W     F+VGDVLVF
Sbjct: 10  MRIGIVFLVAAVAATTVLHTGEALEIFIGGTSGWLRPNDPNWYSNW-EDLKFTVGDVLVF 69

Query: 61  DFPTGGHDVAGVTKDGYDNCNTDNPKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKL 120
           +F    H+VAGVTK+GYDNC+T+N KF+N+T+PF FT+ T  D +FICTVPGHC+AGQK+
Sbjct: 70  NF-LMDHNVAGVTKEGYDNCDTNNLKFINTTSPFLFTIKTLDDLFFICTVPGHCSAGQKI 129

Query: 121 AITTLQQPSSSSAPPPPASPDNSPPLSVDEPPTTTLPPPPPNSASTAIASIFTVAFAAVA 180
           AIT +QQ SS+     P+SPD+         PT    PPPPNS ++ +ASIFTVAF ++A
Sbjct: 130 AITNIQQSSST-----PSSPDS---------PTVVTAPPPPNSVASIMASIFTVAFVSMA 179

Query: 181 ATLIIF 186
             LII+
Sbjct: 190 VMLIIY 179

[Close]

BLAST of Lag0034316 vs. NCBI nr
Match: KAA0050152.1 (uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK06408.1 uncharacterized protein E5676_scaffold163G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-39
Identity = 104/184 (56.52%), Postives = 131/184 (71.20%), Query Frame = 0


Query: 1   MRIGIVFLV-VVAATTVLYAVEAAEFKVGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVF 60
           MRIGIVFLV  VAATTVL+  EA E  +GG SGW RP   ++YS+W     F+VGDVLVF
Sbjct: 1   MRIGIVFLVAAVAATTVLHTGEALEIFIGGTSGWLRPNDPNWYSNW-EDLKFTVGDVLVF 60

Query: 61  DFPTGGHDVAGVTKDGYDNCNTDNPKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKL 120
           +F    H+VAGVTK+GYDNC+T+N KF+N+T+PF FT+ T  D +FICTVPGHC+AGQK+
Sbjct: 61  NF-LMDHNVAGVTKEGYDNCDTNNLKFINTTSPFLFTIKTLDDLFFICTVPGHCSAGQKI 120

Query: 121 AITTLQQPSSSSAPPPPASPDNSPPLSVDEPPTTTLPPPPPNSASTAIASIFTVAFAAVA 180
           AIT +QQ SS+     P+SPD+         PT    PPPPNS ++ +ASIFTVAF ++A
Sbjct: 121 AITNIQQSSST-----PSSPDS---------PTVVTAPPPPNSVASIMASIFTVAFVSMA 168

Query: 181 ATLI 184
              I
Sbjct: 181 VMCI 168

[Close]

BLAST of Lag0034316 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 52/114 (45.61%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 24  EFKVGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVFDFPTGGHDVAGVTKDGYDNCNTDN 83
           ++ VGGD  W RP    FY +WA G+ F VGD L FDF  G HDVA VTKD +DNC  +N
Sbjct: 2   DYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKEN 61

Query: 84  PKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKLAITTLQQPSSSSAPPPPA 138
           P    +T P    L+T    Y+ICTV  HC  GQKL+I  +    +     P A
Sbjct: 62  PISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGATPGA 115

[Close]

BLAST of Lag0034316 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 3.0e-19
Identity = 71/191 (37.17%), Postives = 100/191 (52.36%), Query Frame = 0


Query: 5   IVFLVVVAATTVLYAVEAAEFKVGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVFDFPTG 64
           + FLV+V A  V++   A ++ VG D+ W RP   +FY++WA G+ F VGD L FDF  G
Sbjct: 8   VTFLVLVFAAVVVF---AEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAG 67

Query: 65  GHDVAGVTKDGYDNCNTDNPKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKLAITTL 124
            HDVA V++  ++NC  + P    +  P    L+T    YFICTV  HC  GQKL+IT +
Sbjct: 68  RHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV 127

Query: 125 QQPSSSSAPP---PPASPDNSPPLSVDEPPT---TTLP-------PPPPNSASTAIASIF 183
              ++  A P      +P ++P      PPT   TT P        P  N+AS+   + F
Sbjct: 128 AAGATGGATPGAGATPAPGSTPSTGGTTPPTAGGTTTPSGSSGTTTPAGNAASSLGGATF 187

[Close]

BLAST of Lag0034316 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 60/137 (43.80%), Postives = 80/137 (58.39%), Query Frame = 0


Query: 27  VGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVFDFPTGGHDVAGV-TKDGYDNCN-TDNP 86
           VG ++GW  P S +FYS WAAG+ F VGD L F+FP   H+V  + TK  +D CN  ++ 
Sbjct: 7   VGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSD 66

Query: 87  KFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKLAITTLQQPSSSSAPPPPASPDNSPP 146
             V  T+P    LD     YF+CTV  HC+ GQKL+I  +   ++ S PP    P +SPP
Sbjct: 67  NDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPP----PSSSPP 126

Query: 147 LSVDEPPTTTLPPPPPN 162
            SV  PP   +PPP P+
Sbjct: 127 SSVMPPP--VMPPPSPS 137

[Close]

BLAST of Lag0034316 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.4e-15
Identity = 58/155 (37.42%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 5   IVFLVVVAATTVLYAVEAAEFKVGGDSGWGRPPSSDFYSSWAAGQNFSVGDVLVFDFPTG 64
           ++ ++ V ATT++    A +  +GG SGW    S     +WAAGQ F+VGD LVF +P  
Sbjct: 6   MLIIISVLATTLIGLTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVFSYPAA 65

Query: 65  GHDVAGVTKDGYDNCNTDNPKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKLAITTL 124
            HDV  VTK  +D+C    P    +       L TP   YFIC +PGHC+ G KL +  +
Sbjct: 66  FHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVV 125

Query: 125 QQPSSSSAPPPPASPDNSPPLSVDEPPTTTLPPPP 160
             P+++ AP  P  P+  P L+    P++ LP  P
Sbjct: 126 --PTATVAPTAPL-PNTVPSLNAPS-PSSVLPIQP 153

[Close]

BLAST of Lag0034316 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-12
Identity = 58/169 (34.32%), Postives = 82/169 (48.52%), Query Frame = 0


Query: 9   VVVAATTVLYAVEAA-EFKVGGDSG-WGRPPSSDF-YSSWAAGQNFSVGDVLVFDFPTGG 68
           V + +   L+++ AA E  VGG SG W  PPSS + ++ WA    F VGD +VF + +G 
Sbjct: 14  VAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGK 73

Query: 69  HDVAGVTKDGYDNCNTDNPKFVNSTTPFSFTLDTPTDFYFICTVPGHCAAGQKLAITTLQ 128
             V  VTK+ Y++CNT NP    +       LD    FYFI    GHC  GQKL++  + 
Sbjct: 74  DSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVIS 133

Query: 129 QPSSSSAP-PPPASPDNSPPLSVDEPPTTTLPPPPPNSASTAIASIFTV 174
              S  +P P P   ++ P L+           P P S S  +   + V
Sbjct: 134 PRHSVISPAPSPVEFEDGPALA-----------PAPISGSVRLGGCYVV 171

The following BLAST results are available for this feature:

BLAST of Lag0034316 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878561.1	7.0e-58	67.57	umecyanin-like [Benincasa hispida]	[more]
XP_008443977.1	8.0e-54	63.10	PREDICTED: umecyanin-like [Cucumis melo] >KAA0050151.1 umecyanin-like [Cucumis m...	[more]
XP_004150037.1	3.4e-52	61.42	cucumber peeling cupredoxin-like [Cucumis sativus] >KGN65338.1 hypothetical prot...	[more]
XP_008444048.1	1.7e-40	56.99	PREDICTED: umecyanin-like [Cucumis melo]	[more]
KAA0050152.1	1.9e-39	56.52	uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of Lag0034316 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42849	1.2e-20	45.61	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
Q07488	3.0e-19	37.17	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
P29602	1.1e-18	43.80	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
O82081	3.4e-15	37.42	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
Q9SK27	3.5e-12	34.32	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 39..117 e-value: 1.0E-21 score: 76.7
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 23..125 score: 38.05331
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 22..134 e-value: 1.4E-35 score: 123.8
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 20..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..161
None	No IPR available	PANTHER	PTHR33021:SF302	BLUE COPPER PROTEIN	coord: 6..154
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 6..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034316.1	Lag0034316.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity