Lag0034244 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0034244
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	homeobox protein knotted-1-like 6
Location	chr3: 5654134 .. 5656112 (+)
RNA-Seq Expression	Lag0034244
Synteny	Lag0034244

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATCTTTACGGACTCCATCCCCTCGCCGATTACTCTTACCAGTCCTCTTCATCGGCGCCGACGTTCGACGGCCTCGTCCTTCCGGCCAACTTTCAAATCTATTCTACTGCTTCTGCAGATTATTCTCATCGCCTTCCGCCTTTTGGATCGGAACACTTGCCGTCGGTTTCGTCGGCGGCCTCCGACGCCGCTTTCATGGCGGTTGAGATTCAAACAGCGCGTGCTTTCGAGGAGTCTGCTGATGTTATTAGAGCCAAAATTGCTTCTCATCCTCTTTACCCTAAGCTTGTCGATGCGTTTGTGGAGTGCCAAAAGGTGGTTTTCTATTCTAAGCTTTGAGGCCGCGACGTTGTACGCTTTAAAGAAATAGTGCAATGCTCGCGGTTGAATGTTGAGGAAGGAAGGAAAATTCTTAAGAATCTGTTTGAATGATAATTTCTTTACGCCATTCAAGAACTCGGCATAGACTTCTAAATATCTCTTAAGAAATTATTTCAAAGACGGCATGGTAATATGCCGAACTAGTTAAGTAGTTTTTCCTTGCTTTCATGTTGAATGGTGAAATTGTAAAAATCTGAAGCTCTTCTATTACGGTGGTCTAGTGTGCATTTTCTGGCCTTCGCGTGGTACTTCTCGAGAGTAAAATGCTACTAATCGTAGTTCTTCAGTAAGGGGAAAAAATGAACGAAAACCGAAGATAGTAGTCGGAAGAACAGTTTCGAATCTATATTTTGTGAGCTACAGTTGTTTCCGCGTTTAGTTAGGGTTAACTCCGAGTTGCTTTCTTCAGATGTAGATTCGTTAGTATTATGTCCCAATTGGTGCGTTATTCTTATCTCATGATTGTGGCCTTTTCAGGTCGGTGCACCGCCGGAGATCGCTAACATTCTAGACAAAAGCAATCGTGGAAGCGACATCGGCGAAAGAACTTCCGGCGTTTCGACTTGCTTGGGTGCCGATCCCGAACTCGATGAGTTCATGGTATTTGCTTTGTTTTCCGTTCATATTTTTCAATTTTCTTCTTAAACACATAGAACCCGACCTGAACCAAAAATAAAGAAAATTCCTCAGTTTTCCTGTGGTTTATATATTTTTACTGGTTTAGTTCACAATTTGGAATAGGAAACATACTGCGGAATACTGGCCAAGTACAAGTTGGATCTCTCACAGCCCTTCGCTGAAGCATCTTCCTTCCTCAACAATATGGAAATGCAGTTAAACAGGCTATGTAACGGCACCACCAGAGGCTATGTTTCCGGTTCGTCATTCTCTCTCTGTCATACGCACGTCTGTTTTCTTACGATTTATTGCTTATTTTATTGAGTTTGTTGGTTTTTGTGCTTTCCTGGGATTTATTTTCTGCTTTAGTATAATGTTCGTGTGTCTGTGCCTGTAGTACTGTGGTAGGCGAACTCTTTTTATTATTTATTATTCATTGTGGCCATGGTATTTTATGTTTGTCTGTTCCTTTCCACGTGAAAACCCCGGCCGTATGATAAATAATCATGTGCACGCTCGCTCTCCTCGGTCTATTTCCCTTGAGCTCGGTGCAAATCCTGATCTGAAAGAATATTTCATGCCTTGCCCTTTAATTCAAATTAACTTGAGATTACAAGATGTGGCAAAAAAAATTTCGCGAACCAAGAACAAAATCGTACCTAGAATGTGAAAGACTCCTTCCCTCCCTCTAACATTTTAAAACATGCATGCTAGTCCAAAGTATTACTTATTGTAGTTAGGTTTTGGGTATCGATGTGAAATCCACATGGACTTCAATTTGAACTTTTGATGTTTCCAGAGATTCCTGTCTTAATTGATGTAAATGCTCCTTTGGTTTGGTGGCATACCAGATTTTCTTAGTCTTAGGTAGAAGTTCTGGAGTTTCAGCTCCTTTATCCTTCTGCGGTAGTAAGTATTTCGAACAATACTTCGCTGCAAACCGGAGTGTAGAGATCTTCCTACACCACCATTAA

mRNA sequence

ATGGCGGATCTTTACGGACTCCATCCCCTCGCCGATTACTCTTACCAGTCCTCTTCATCGGCGCCGACGTTCGACGGCCTCGTCCTTCCGGCCAACTTTCAAATCTATTCTACTGCTTCTGCAGATTATTCTCATCGCCTTCCGCCTTTTGGATCGGAACACTTGCCGTCGGTTTCGTCGGCGGCCTCCGACGCCGCTTTCATGGCGGTTGAGATTCAAACAGCGCGTGCTTTCGAGGAGTCTGCTGATGTTATTAGAGCCAAAATTGCTTCTCATCCTCTTTACCCTAAGCTTGTCGATGCGTTTGTGGAGTGCCAAAAGGTCGGTGCACCGCCGGAGATCGCTAACATTCTAGACAAAAGCAATCGTGGAAGCGACATCGGCGAAAGAACTTCCGGCGTTTCGACTTGCTTGGGTGCCGATCCCGAACTCGATGAGTTCATGGAAACATACTGCGGAATACTGGCCAAGTACAAGTTGGATCTCTCACAGCCCTTCGCTGAAGCATCTTCCTTCCTCAACAATATGGAAATGCAGTTAAACAGGCTATGTAACGGCACCACCAGAGGCTATGTTTCCGGTAGAAGTTCTGGAGTTTCAGCTCCTTTATCCTTCTGCGGTAGTAAGTATTTCGAACAATACTTCGCTGCAAACCGGAGTGTAGAGATCTTCCTACACCACCATTAA

Coding sequence (CDS)

ATGGCGGATCTTTACGGACTCCATCCCCTCGCCGATTACTCTTACCAGTCCTCTTCATCGGCGCCGACGTTCGACGGCCTCGTCCTTCCGGCCAACTTTCAAATCTATTCTACTGCTTCTGCAGATTATTCTCATCGCCTTCCGCCTTTTGGATCGGAACACTTGCCGTCGGTTTCGTCGGCGGCCTCCGACGCCGCTTTCATGGCGGTTGAGATTCAAACAGCGCGTGCTTTCGAGGAGTCTGCTGATGTTATTAGAGCCAAAATTGCTTCTCATCCTCTTTACCCTAAGCTTGTCGATGCGTTTGTGGAGTGCCAAAAGGTCGGTGCACCGCCGGAGATCGCTAACATTCTAGACAAAAGCAATCGTGGAAGCGACATCGGCGAAAGAACTTCCGGCGTTTCGACTTGCTTGGGTGCCGATCCCGAACTCGATGAGTTCATGGAAACATACTGCGGAATACTGGCCAAGTACAAGTTGGATCTCTCACAGCCCTTCGCTGAAGCATCTTCCTTCCTCAACAATATGGAAATGCAGTTAAACAGGCTATGTAACGGCACCACCAGAGGCTATGTTTCCGGTAGAAGTTCTGGAGTTTCAGCTCCTTTATCCTTCTGCGGTAGTAAGTATTTCGAACAATACTTCGCTGCAAACCGGAGTGTAGAGATCTTCCTACACCACCATTAA

Protein sequence

MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSSAASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDKSNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQLNRLCNGTTRGYVSGRSSGVSAPLSFCGSKYFEQYFAANRSVEIFLHHH

Homology

[Close]

BLAST of Lag0034244 vs. NCBI nr
Match: KAG6587466.1 (Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288.9 bits (738), Expect = 3.9e-74
Identity = 150/201 (74.63%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           MADLYGLHPLADYSY+SSS+AP  D L++P N+Q YSTAS+DYSH L  FGS H+PSVSS
Sbjct: 1   MADLYGLHPLADYSYESSSAAP-LDNLLVPVNYQAYSTASSDYSHPLQVFGSGHVPSVSS 60

Query: 61  AASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDK 120
              DAA +AV  +     EESA  IR KIASHPLYP+LVDAFV+CQK+GAPPE+ANIL +
Sbjct: 61  GDYDAALVAVVSE-----EESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 SNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQL 180
           S RGSDIGERTS VST LGADPELDEFMETYCGILAKYKLDLS PF EASSFLNNME QL
Sbjct: 121 SVRGSDIGERTSSVSTRLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQL 180

Query: 181 NRLCNGTTRGYVSGRSSGVSA 202
           NRLCNGTTRGYVS  ++  S+
Sbjct: 181 NRLCNGTTRGYVSDEAAAGSS 195

[Close]

BLAST of Lag0034244 vs. NCBI nr
Match: XP_022928493.1 (homeobox protein knotted-1-like 6 [Cucurbita moschata] >XP_022928502.1 homeobox protein knotted-1-like 6 [Cucurbita moschata])

HSP 1 Score: 288.9 bits (738), Expect = 3.9e-74
Identity = 150/201 (74.63%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           MADLYGLHPLADYSY+SSS+AP  D L++P N+Q YSTAS+DYSH L  FGS H+PSVSS
Sbjct: 1   MADLYGLHPLADYSYESSSAAP-LDNLLVPVNYQAYSTASSDYSHPLQVFGSGHVPSVSS 60

Query: 61  AASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDK 120
              DAA +AV  +     EESA  IR KIASHPLYP+LVDAFV+CQK+GAPPE+ANIL +
Sbjct: 61  GDYDAALVAVVSE-----EESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 SNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQL 180
           S RGSDIGERTS VST LGADPELDEFMETYCGILAKYKLDLS PF EASSFLNNME QL
Sbjct: 121 SLRGSDIGERTSSVSTRLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQL 180

Query: 181 NRLCNGTTRGYVSGRSSGVSA 202
           NRLCNGTTRGYVS  ++  S+
Sbjct: 181 NRLCNGTTRGYVSDEAAAGSS 195

[Close]

BLAST of Lag0034244 vs. NCBI nr
Match: XP_023004610.1 (homeobox protein knotted-1-like 6 [Cucurbita maxima])

HSP 1 Score: 288.9 bits (738), Expect = 3.9e-74
Identity = 150/201 (74.63%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           MADLYGLHPLADYSY+SSS+AP  D L++P NFQ YSTASADYSH L  FGS H+PSVSS
Sbjct: 1   MADLYGLHPLADYSYESSSAAP-LDNLLVPVNFQAYSTASADYSHWLQVFGSGHVPSVSS 60

Query: 61  AASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDK 120
              DAA   V      + EESA  IR KIASHPLYP+LVDAFV+CQK+GAPPE+ANIL +
Sbjct: 61  GDYDAALAVV------SEEESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 SNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQL 180
           S RG DIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLS PF EASSFLNNME QL
Sbjct: 121 SVRGRDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQL 180

Query: 181 NRLCNGTTRGYVSGRSSGVSA 202
           + LCNGTTRGYVS  ++  S+
Sbjct: 181 SSLCNGTTRGYVSDETAAGSS 194

[Close]

BLAST of Lag0034244 vs. NCBI nr
Match: XP_023531461.1 (homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.9 bits (738), Expect = 3.9e-74
Identity = 150/201 (74.63%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           MADLYGLHPLADYSY+SSS+AP  D L++P N+Q YSTAS+DYSH L  FGS H+PSVSS
Sbjct: 1   MADLYGLHPLADYSYESSSAAP-LDNLLVPVNYQAYSTASSDYSHPLQVFGSGHVPSVSS 60

Query: 61  AASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDK 120
              DAA +AV  +     EESA  IR KIASHPLYP+LVDAFV+CQK+GAPPE+ANIL +
Sbjct: 61  GDYDAALVAVVSE-----EESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 SNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQL 180
           S RGSDIGERTS VST LGADPELDEFMETYCGILAKYKLDLS PF EASSFLNNME QL
Sbjct: 121 SVRGSDIGERTSSVSTRLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQL 180

Query: 181 NRLCNGTTRGYVSGRSSGVSA 202
           NRLCNGTTRGYVS  ++  S+
Sbjct: 181 NRLCNGTTRGYVSDEAAAGSS 195

[Close]

BLAST of Lag0034244 vs. NCBI nr
Match: KAG7021446.1 (Homeobox protein knotted-1-like 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.3 bits (721), Expect = 3.6e-72
Identity = 150/207 (72.46%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           MADLYGLHPLADYSY+SSS+AP  D L++P N+Q YSTAS+DYSH L  FGS H+PSVSS
Sbjct: 1   MADLYGLHPLADYSYESSSAAP-LDNLLVPVNYQAYSTASSDYSHPLQVFGSGHVPSVSS 60

Query: 61  AASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDK 120
              DAA +AV  +     EESA  IR KIASHPLYP+LVDAFV+CQK+GAPPE+ANIL +
Sbjct: 61  GDYDAALVAVVSE-----EESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 SNRGSDIGERTSGVSTCLGADPELDEFM------ETYCGILAKYKLDLSQPFAEASSFLN 180
           S RGSDIGERTS VST LGADPELDEFM      ETYCGILAKYKLDLS PF EASSFLN
Sbjct: 121 SVRGSDIGERTSSVSTRLGADPELDEFMVFALLAETYCGILAKYKLDLSLPFVEASSFLN 180

Query: 181 NMEMQLNRLCNGTTRGYVSGRSSGVSA 202
           NME QLNRLCNGTTRGYVS  ++  S+
Sbjct: 181 NMETQLNRLCNGTTRGYVSDEAAAGSS 201

[Close]

BLAST of Lag0034244 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37
Identity = 90/188 (47.87%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPS--V 60
           M  +Y  H   DYS   S    + + L+ P+++Q    +SA  +     FGS+ L S  V
Sbjct: 1   MDGMYNFHSAGDYS-DKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAV 60

Query: 61  SSAASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANIL 120
           S+ +S+AA +A EI+       S  VI+AKIA HP YP+L+ A+++CQKVGAPPEIA +L
Sbjct: 61  SALSSEAASIAPEIR-RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLL 120

Query: 121 DKSNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEM 180
           ++  R SD+ ++    S+C GADPELDEFMETYC IL KYK DL++PF EA+ FLN +EM
Sbjct: 121 EEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEM 180

Query: 181 QLNRLCNG 187
           QL  LC G
Sbjct: 181 QLRNLCTG 186

[Close]

BLAST of Lag0034244 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 81/201 (40.30%), Postives = 118/201 (58.71%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           M  + G     DYS +++        L++P+++Q    ++   + RL  FGS+ L +  S
Sbjct: 1   MDRMCGFRSTEDYSEKAT--------LMMPSDYQSLICSTTGDNQRL--FGSDELATALS 60

Query: 61  AASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDK 120
           +      +   I+ A     S  VI++KIASHPLYP+L+  +++CQKVGAP EIA IL++
Sbjct: 61  SE-----LLPRIRKAED-NFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEE 120

Query: 121 SNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQL 180
             R + + +R     +C GADPELDEFMETYC IL KYK DL++PF EA++F+N +EMQL
Sbjct: 121 IQRENHVYKRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQL 180

Query: 181 NRLCNGTTRGYVSGRSSGVSA 202
             LC G            VS+
Sbjct: 181 QNLCTGPASATALSDDGAVSS 185

[Close]

BLAST of Lag0034244 vs. ExPASy Swiss-Prot
Match: Q9FP29 (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH6 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 60/133 (45.11%), Postives = 89/133 (66.92%), Query Frame = 0


Query: 58  VSSAASDAAFMAVEIQTARAFEES--ADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIA 117
           V  AAS+A+ + V +        S   ++++A+IA HP YP L+ A++EC+KVGAPPE+A
Sbjct: 14  VGGAASEASGVGVVVGGGGGSSSSDLTELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVA 73

Query: 118 NILDKSNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNN 177
           ++L +  R    G    G    +G DPELDEFME YC +L +YK +LS+PF EA+SFL++
Sbjct: 74  SLLKEIGRERRAGGGGGGAGQ-IGVDPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSS 133

Query: 178 MEMQLNRLCNGTT 189
           ++ QL+ LC+G T
Sbjct: 134 IQTQLSNLCSGAT 145

[Close]

BLAST of Lag0034244 vs. ExPASy Swiss-Prot
Match: A2Y007 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH71 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 8.5e-24
Identity = 52/113 (46.02%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 74  TARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDKSNRGSDIGERTSG 133
           T  A  +  ++++A+IA HP YP L+ A++EC+KVGAPPE+  +L++  R    G   + 
Sbjct: 44  TTAAAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGAT 103

Query: 134 VSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQLNRLCNG 187
               +G DPELDEFMETYC +L +YK +L++PF EA+SFL  +  QL  LC G
Sbjct: 104 AGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGG 156

[Close]

BLAST of Lag0034244 vs. ExPASy Swiss-Prot
Match: Q7GDL5 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH71 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.5e-24
Identity = 52/113 (46.02%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 74  TARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDKSNRGSDIGERTSG 133
           T  A  +  ++++A+IA HP YP L+ A++EC+KVGAPPE+  +L++  R    G   + 
Sbjct: 44  TTAAAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGAT 103

Query: 134 VSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQLNRLCNG 187
               +G DPELDEFMETYC +L +YK +L++PF EA+SFL  +  QL  LC G
Sbjct: 104 AGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGG 156

[Close]

BLAST of Lag0034244 vs. ExPASy TrEMBL
Match: A0A6J1EK44 (homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111435282 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.9e-74
Identity = 150/201 (74.63%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           MADLYGLHPLADYSY+SSS+AP  D L++P N+Q YSTAS+DYSH L  FGS H+PSVSS
Sbjct: 1   MADLYGLHPLADYSYESSSAAP-LDNLLVPVNYQAYSTASSDYSHPLQVFGSGHVPSVSS 60

Query: 61  AASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDK 120
              DAA +AV  +     EESA  IR KIASHPLYP+LVDAFV+CQK+GAPPE+ANIL +
Sbjct: 61  GDYDAALVAVVSE-----EESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 SNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQL 180
           S RGSDIGERTS VST LGADPELDEFMETYCGILAKYKLDLS PF EASSFLNNME QL
Sbjct: 121 SLRGSDIGERTSSVSTRLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQL 180

Query: 181 NRLCNGTTRGYVSGRSSGVSA 202
           NRLCNGTTRGYVS  ++  S+
Sbjct: 181 NRLCNGTTRGYVSDEAAAGSS 195

[Close]

BLAST of Lag0034244 vs. ExPASy TrEMBL
Match: A0A6J1KV29 (homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111497855 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.9e-74
Identity = 150/201 (74.63%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           MADLYGLHPLADYSY+SSS+AP  D L++P NFQ YSTASADYSH L  FGS H+PSVSS
Sbjct: 1   MADLYGLHPLADYSYESSSAAP-LDNLLVPVNFQAYSTASADYSHWLQVFGSGHVPSVSS 60

Query: 61  AASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDK 120
              DAA   V      + EESA  IR KIASHPLYP+LVDAFV+CQK+GAPPE+ANIL +
Sbjct: 61  GDYDAALAVV------SEEESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 SNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQL 180
           S RG DIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLS PF EASSFLNNME QL
Sbjct: 121 SVRGRDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQL 180

Query: 181 NRLCNGTTRGYVSGRSSGVSA 202
           + LCNGTTRGYVS  ++  S+
Sbjct: 181 SSLCNGTTRGYVSDETAAGSS 194

[Close]

BLAST of Lag0034244 vs. ExPASy TrEMBL
Match: A0A6J1BZ15 (homeobox protein knotted-1-like 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006901 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.6e-70
Identity = 157/225 (69.78%), Postives = 170/225 (75.56%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           M DLYGLH +ADYS+Q SSSAP  + LV PAN Q YSTASAD SHRLP FGSE L  VSS
Sbjct: 1   MGDLYGLHLVADYSHQ-SSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSS 60

Query: 61  AASDAAFMAVEIQTARAF-EESADVIRAKIASHPLYPKLVDAFVECQKVGAPPE-IANIL 120
           AASDAA M VEIQ ARA  EESA  IRAKIASHPLYPKL++AFV+CQKVGAPPE I NIL
Sbjct: 61  AASDAALM-VEIQRARAVEEESAAAIRAKIASHPLYPKLLEAFVDCQKVGAPPETIVNIL 120

Query: 121 DKSNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEM 180
           D+S R +DI     GVSTCLGADPELD FMETYCGILAKYKLDLS+P  EASSFLNNMEM
Sbjct: 121 DESQRRNDI-----GVSTCLGADPELDVFMETYCGILAKYKLDLSKPLVEASSFLNNMEM 180

Query: 181 QLNRLCNGTTRGYVSGRSSGVSAPLSFCGSKYFEQYFAANRSVEI 224
           QLNRLC G TRGYVS  + G S      G    ++   AN   E+
Sbjct: 181 QLNRLCIGATRGYVSDEAGGPSEEDLSAGELELQESLPANEDGEL 218

[Close]

BLAST of Lag0034244 vs. ExPASy TrEMBL
Match: A0A6J1BZH2 (homeobox protein knotted-1-like 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006901 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.5e-68
Identity = 157/232 (67.67%), Postives = 170/232 (73.28%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           M DLYGLH +ADYS+Q SSSAP  + LV PAN Q YSTASAD SHRLP FGSE L  VSS
Sbjct: 1   MGDLYGLHLVADYSHQ-SSSAPPLESLVFPANCQTYSTASADCSHRLPAFGSELLAPVSS 60

Query: 61  AASDAAFMAVEIQTARAF-EESADVIRAKIASHPLYPKLVDAFVECQ-------KVGAPP 120
           AASDAA M VEIQ ARA  EESA  IRAKIASHPLYPKL++AFV+CQ       KVGAPP
Sbjct: 61  AASDAALM-VEIQRARAVEEESAAAIRAKIASHPLYPKLLEAFVDCQKVVFYSEKVGAPP 120

Query: 121 E-IANILDKSNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASS 180
           E I NILD+S R +DI     GVSTCLGADPELD FMETYCGILAKYKLDLS+P  EASS
Sbjct: 121 ETIVNILDESQRRNDI-----GVSTCLGADPELDVFMETYCGILAKYKLDLSKPLVEASS 180

Query: 181 FLNNMEMQLNRLCNGTTRGYVSGRSSGVSAPLSFCGSKYFEQYFAANRSVEI 224
           FLNNMEMQLNRLC G TRGYVS  + G S      G    ++   AN   E+
Sbjct: 181 FLNNMEMQLNRLCIGATRGYVSDEAGGPSEEDLSAGELELQESLPANEDGEL 225

[Close]

BLAST of Lag0034244 vs. ExPASy TrEMBL
Match: A0A5A7URR0 (Homeobox protein knotted-1-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001370 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.5e-55
Identity = 134/208 (64.42%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           MA LYGLHPLA  SY SSS+  T + L +P       T SADYSH LP F +EH    SS
Sbjct: 1   MAGLYGLHPLAANSYHSSSTT-TLETLPIP-------THSADYSHPLPDFEAEHSRPFSS 60

Query: 61  AASDAAFMAVEIQTARAF--EESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANIL 120
            AS  A  A E +TA A   EESA VIRAKIASHPLYPKLVDAF+ CQKVGAPPE+A IL
Sbjct: 61  VASKTAITA-ETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKIL 120

Query: 121 DKSNRGSD-IGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNME 180
           D+ NRG++ IG+    VSTCLG DPELDEFM   CG+LAKY+LDL QP  EASSFL NME
Sbjct: 121 DQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNME 180

Query: 181 MQLNRLCNGTTRGYVSGRSSGVSAPLSF 206
           MQLN LC GT RGYV   SSG S  LSF
Sbjct: 181 MQLNLLCEGTNRGYV---SSGSSFSLSF 196

[Close]

BLAST of Lag0034244 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 157.9 bits (398), Expect = 9.6e-39
Identity = 90/188 (47.87%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPS--V 60
           M  +Y  H   DYS   S    + + L+ P+++Q    +SA  +     FGS+ L S  V
Sbjct: 1   MDGMYNFHSAGDYS-DKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAV 60

Query: 61  SSAASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANIL 120
           S+ +S+AA +A EI+       S  VI+AKIA HP YP+L+ A+++CQKVGAPPEIA +L
Sbjct: 61  SALSSEAASIAPEIR-RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLL 120

Query: 121 DKSNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEM 180
           ++  R SD+ ++    S+C GADPELDEFMETYC IL KYK DL++PF EA+ FLN +EM
Sbjct: 121 EEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEM 180

Query: 181 QLNRLCNG 187
           QL  LC G
Sbjct: 181 QLRNLCTG 186

[Close]

BLAST of Lag0034244 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 152.9 bits (385), Expect = 3.1e-37
Identity = 90/190 (47.37%), Postives = 122/190 (64.21%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPS--V 60
           M  +Y  H   DYS   S    + + L+ P+++Q    +SA  +     FGS+ L S  V
Sbjct: 1   MDGMYNFHSAGDYS-DKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAV 60

Query: 61  SSAASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQK--VGAPPEIAN 120
           S+ +S+AA +A EI+       S  VI+AKIA HP YP+L+ A+++CQK  VGAPPEIA 
Sbjct: 61  SALSSEAASIAPEIR-RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIAC 120

Query: 121 ILDKSNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNM 180
           +L++  R SD+ ++    S+C GADPELDEFMETYC IL KYK DL++PF EA+ FLN +
Sbjct: 121 LLEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKI 180

Query: 181 EMQLNRLCNG 187
           EMQL  LC G
Sbjct: 181 EMQLRNLCTG 188

[Close]

BLAST of Lag0034244 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 138.3 bits (347), Expect = 7.8e-33
Identity = 81/201 (40.30%), Postives = 118/201 (58.71%), Query Frame = 0


Query: 1   MADLYGLHPLADYSYQSSSSAPTFDGLVLPANFQIYSTASADYSHRLPPFGSEHLPSVSS 60
           M  + G     DYS +++        L++P+++Q    ++   + RL  FGS+ L +  S
Sbjct: 1   MDRMCGFRSTEDYSEKAT--------LMMPSDYQSLICSTTGDNQRL--FGSDELATALS 60

Query: 61  AASDAAFMAVEIQTARAFEESADVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDK 120
           +      +   I+ A     S  VI++KIASHPLYP+L+  +++CQKVGAP EIA IL++
Sbjct: 61  SE-----LLPRIRKAED-NFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEE 120

Query: 121 SNRGSDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQL 180
             R + + +R     +C GADPELDEFMETYC IL KYK DL++PF EA++F+N +EMQL
Sbjct: 121 IQRENHVYKRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQL 180

Query: 181 NRLCNGTTRGYVSGRSSGVSA 202
             LC G            VS+
Sbjct: 181 QNLCTGPASATALSDDGAVSS 185

[Close]

BLAST of Lag0034244 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 99.0 bits (245), Expect = 5.3e-21
Identity = 63/172 (36.63%), Postives = 91/172 (52.91%), Query Frame = 0


Query: 48  PPFGSEHLPSVSSAASDAA------------FMAVEIQTARAFEESADVIRAKIASHPLY 107
           PP G+++  + SS+ S  A             +A  I    +   SA V +AKI +HP Y
Sbjct: 73  PPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSSSSSSASV-KAKIMAHPHY 132

Query: 108 PKLVDAFVECQKVGAPPEIANILDKSNRGSDIGERTSGVSTCLGADPELDEFMETYCGIL 167
            +L+ A+V CQKVGAPPE+   L+++   +     + G + CLG DP LD+FME YC +L
Sbjct: 133 HRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLDQFMEAYCEML 192

Query: 168 AKYKLDLSQPFAEASSFLNNMEMQLNRLCNGTTRGYVSGRSSGVSAPLSFCG 208
            KY+ +LS+PF EA  FL  +E Q               +S  +S+P SF G
Sbjct: 193 VKYEQELSKPFKEAMVFLQRVECQF--------------KSLSLSSPSSFSG 229

[Close]

BLAST of Lag0034244 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 40/103 (38.83%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 83  DVIRAKIASHPLYPKLVDAFVECQKVGAPPEIANILDKSNRGSDIGERTSGVSTCLGA-D 142
           + ++AKI +HP Y  L+ A+++CQK+GAPP++ + +  + +  +  ++ S  S    + D
Sbjct: 132 EAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRD 191

Query: 143 PELDEFMETYCGILAKYKLDLSQPFAEASSFLNNMEMQLNRLC 185
           PELD+FME YC +L KY+ +L++P  EA  F+  +E QL+ LC
Sbjct: 192 PELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLC 234

The following BLAST results are available for this feature:

BLAST of Lag0034244 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587466.1	3.9e-74	74.63	Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022928493.1	3.9e-74	74.63	homeobox protein knotted-1-like 6 [Cucurbita moschata] >XP_022928502.1 homeobox ...	[more]
XP_023004610.1	3.9e-74	74.63	homeobox protein knotted-1-like 6 [Cucurbita maxima]	[more]
XP_023531461.1	3.9e-74	74.63	homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo]	[more]
KAG7021446.1	3.6e-72	72.46	Homeobox protein knotted-1-like 6 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lag0034244 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JS6	1.3e-37	47.87	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]
P46640	1.1e-31	40.30	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]
Q9FP29	1.2e-25	45.11	Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OS...	[more]
A2Y007	8.5e-24	46.02	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH...	[more]
Q7GDL5	8.5e-24	46.02	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]

BLAST of Lag0034244 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK44	1.9e-74	74.63	homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111435282 ...	[more]
A0A6J1KV29	1.9e-74	74.63	homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111497855 PE...	[more]
A0A6J1BZ15	3.6e-70	69.78	homeobox protein knotted-1-like 6 isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1BZH2	4.5e-68	67.67	homeobox protein knotted-1-like 6 isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A5A7URR0	1.5e-55	64.42	Homeobox protein knotted-1-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Lag0034244 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23380.1	9.6e-39	47.87	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	3.1e-37	47.37	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	7.8e-33	40.30	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT1G62360.1	5.3e-21	36.63	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	1.1e-18	38.83	KNOTTED-like from Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 134..185 e-value: 1.1E-21 score: 88.1
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 138..184 e-value: 4.4E-22 score: 77.3
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 83..127 e-value: 1.8E-17 score: 74.0
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 85..123 e-value: 2.3E-18 score: 65.6
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 1..190
None	No IPR available	PANTHER	PTHR11850:SF254	HOMEOBOX PROTEIN KNOTTED-1-LIKE 6	coord: 1..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0034244.1	Lag0034244.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding