Lag0033960 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033960
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	AT-hook motif nuclear-localized protein 16
Location	chr3: 3305390 .. 3306343 (+)
RNA-Seq Expression	Lag0033960
Synteny	Lag0033960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTGGTGATCAAGATATGGCAGTTCACTCTCTTGGATCTAAAGTTTCTTCTGTAGTTTCAGATCATGAACCTGAAAAATGTGCCAATAATGCCAATCACCAACAAAGACCTTGCTTTGATCCTTCTCTTGTTTCTCCCAAGGCTGTGCCGCCCATCTCGGTGGCCGCGGAGGCCGATCAAGCCCTCCGCCGTCCTCGGGGCGCCCGGCCGGGTCCAAAAACAAGCCGAAACCACCCATTATCGTTACCCGAGATAGCGCCAATGCTCTCCGGGCTCATGCCATTGAGGTCAGCTCTGGCTGCGATGTCAATGAGAGCCTCTCCAATTTCGCCCGGAGGAAGCAGCGGGGAGTTTGCATTCTTAGCGGAAGTGGGTGCGTCACTAATGTCACACTCCGCCAGGCTGCTTCCTCTGGCGCCATTGTCACTCTCCATGGCCGGTAAATTTAATCTTTTATTCATATTCTTTACGTTGACATTACAAATAAATTAGAAATCTTTAAAAGCACAAACACTTTCTACTTTAAACGGAAGGATTACAGTAAATTTAATCTTTTATTCATATTCCTAACAGCTTCGAGATTCTTTCGTTGCTGGGATCGATCTTGCCACCACCAGCACCGTCAGGGATCACCGGTCTGACAATTTACTTGGCCGGCGCACAAGGGCAGGTGGTCGGCGGAGTGGTGGTGGGCGCGCTCATTGCTTCTGGCCCGTCGTGATCATGGCGGCAACATTCATGAATGCGACATTCGACCGCCTGCCATCGGACGACGACGAAGTGGCGGCTGCCATGCAGAGCCAACACTACGGCCAAAATGGGCGGAGCCACCACCACCTGGATGTTTCGGATCTGTATGGAGTGCCACAAAACTTGATCACCAACAGCACTCTTCCGCCGGAATTATACTCTTGGGCGGCGGCCGGCAGAACCATGTCAAAGACTTAA

mRNA sequence

ATGGCTGGTGGTGATCAAGATATGGCAGTTCACTCTCTTGGATCTAAAGTTTCTTCTGTAGTTTCAGATCATGAACCTGAAAAATGTGCCAATAATGCCAATCACCAACAAAGACCTTGCTTTGATCCTTCTCTTGTTTCTCCCAAGGCTGTGCCGCCCATCTCGGTGGCCGCGGAGGCCGATCAAGCCCTCCGCCGTCCTCGGGGCGCCCGGCCGGGTCCAAAAACAAGCCGAAACCACCCATTATCGTTACCCGAGATAGCGCCAATGCTCTCCGGGCTCATGCCATTGAGGTCAGCTCTGGCTGCGATGTCAATGAGAGCCTCTCCAATTTCGCCCGGAGGAAGCAGCGGGGAGTTTGCATTCTTAGCGGAACTTCGAGATTCTTTCGTTGCTGGGATCGATCTTGCCACCACCAGCACCGTCAGGGATCACCGGTCTGACAATTTACTTGGCCGGCGCACAAGGGCAGGTGGTCGGCGGAGTGGTGGTGGGCGCGCTCATTGCTTCTGGCCCGTCGTGATCATGGCGGCAACATTCATGAATGCGACATTCGACCGCCTGCCATCGGACGACGACGAAGTGGCGGCTGCCATGCAGAGCCAACACTACGGCCAAAATGGGCGGAGCCACCACCACCTGGATGTTTCGGATCTGTATGGAGTGCCACAAAACTTGATCACCAACAGCACTCTTCCGCCGGAATTATACTCTTGGGCGGCGGCCGGCAGAACCATGTCAAAGACTTAA

Coding sequence (CDS)

ATGGCTGGTGGTGATCAAGATATGGCAGTTCACTCTCTTGGATCTAAAGTTTCTTCTGTAGTTTCAGATCATGAACCTGAAAAATGTGCCAATAATGCCAATCACCAACAAAGACCTTGCTTTGATCCTTCTCTTGTTTCTCCCAAGGCTGTGCCGCCCATCTCGGTGGCCGCGGAGGCCGATCAAGCCCTCCGCCGTCCTCGGGGCGCCCGGCCGGGTCCAAAAACAAGCCGAAACCACCCATTATCGTTACCCGAGATAGCGCCAATGCTCTCCGGGCTCATGCCATTGAGGTCAGCTCTGGCTGCGATGTCAATGAGAGCCTCTCCAATTTCGCCCGGAGGAAGCAGCGGGGAGTTTGCATTCTTAGCGGAACTTCGAGATTCTTTCGTTGCTGGGATCGATCTTGCCACCACCAGCACCGTCAGGGATCACCGGTCTGACAATTTACTTGGCCGGCGCACAAGGGCAGGTGGTCGGCGGAGTGGTGGTGGGCGCGCTCATTGCTTCTGGCCCGTCGTGATCATGGCGGCAACATTCATGAATGCGACATTCGACCGCCTGCCATCGGACGACGACGAAGTGGCGGCTGCCATGCAGAGCCAACACTACGGCCAAAATGGGCGGAGCCACCACCACCTGGATGTTTCGGATCTGTATGGAGTGCCACAAAACTTGATCACCAACAGCACTCTTCCGCCGGAATTATACTCTTGGGCGGCGGCCGGCAGAACCATGTCAAAGACTTAA

Protein sequence

MAGGDQDMAVHSLGSKVSSVVSDHEPEKCANNANHQQRPCFDPSLVSPKAVPPISVAAEADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPGGSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSDNLLGRRTRAGGRRSGGGRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAMQSQHYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT

Homology

[Close]

BLAST of Lag0033960 vs. NCBI nr
Match: XP_038880552.1 (AT-hook motif nuclear-localized protein 16 [Benincasa hispida])

HSP 1 Score: 255.0 bits (650), Expect = 6.7e-64
Identity = 160/287 (55.75%), Postives = 179/287 (62.37%), Query Frame = 0


Query: 1   MAGGDQDMAVHSLGSKVSSVVSDHEPEKCANNA--NHQQRPCFDPSLVSPKAVPPISVAA 60
           MAGGDQDMA+HSLGSK+ SVVS+HEPEKC +NA  NHQQRPCFDPSLVSPKAVPPISVA 
Sbjct: 3   MAGGDQDMAIHSLGSKL-SVVSEHEPEKCGSNATNNHQQRPCFDPSLVSPKAVPPISVAV 62

Query: 61  EADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG---- 120
           E+DQALRRPRG   G K     P            ++  R +  A+   A  +S G    
Sbjct: 63  ESDQALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSSGCDVN 122

Query: 121 GSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR-------- 180
            S   FA   +     ++G    T  T+R   S              ++LG         
Sbjct: 123 ESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPPAPS 182

Query: 181 --------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAMQSQ 240
                      A G+  GG   G      PVVIMAATFMNATFDRLPSDD+EVAAAMQSQ
Sbjct: 183 GITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVAAAMQSQ 242

Query: 241 HYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 250
           HYGQNGRSHHHLDVSDLYGVPQNLITNS+LPPELYSWAAAGRTMSKT
Sbjct: 243 HYGQNGRSHHHLDVSDLYGVPQNLITNSSLPPELYSWAAAGRTMSKT 276

[Close]

BLAST of Lag0033960 vs. NCBI nr
Match: KAE8652473.1 (hypothetical protein Csa_013658 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-61
Identity = 158/289 (54.67%), Postives = 177/289 (61.25%), Query Frame = 0


Query: 1   MAGGDQ-DMAVHSLGSKVSSVVSDHEPEKCANN---ANHQQRPCFDPSLVSPKAVPPISV 60
           MAGGDQ DMAVHSLGSK+ S++SDHEPEKC NN    NHQQRPCFDPSLVSPK VPPISV
Sbjct: 1   MAGGDQADMAVHSLGSKL-SLISDHEPEKCGNNNVTNNHQQRPCFDPSLVSPKVVPPISV 60

Query: 61  AAEADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG-- 120
           AAE+DQALRRPRG   G K     P            ++  R +  A+   A  +S G  
Sbjct: 61  AAESDQALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSTGCD 120

Query: 121 --GSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR------ 180
              S   FA   +     ++G    T  T+R   S              ++LG       
Sbjct: 121 VNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPPA 180

Query: 181 ----------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAMQ 240
                      + A G+  GG   G      PVVIMAATFMNATFDRLPSDD+EVAA MQ
Sbjct: 181 PSGITGLTIYLSGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVAATMQ 240

Query: 241 SQHYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 250
           SQHYGQNGRSHHHLDVSDLYGVPQNLITNS+LPPELYSWA AGRTMSKT
Sbjct: 241 SQHYGQNGRSHHHLDVSDLYGVPQNLITNSSLPPELYSWATAGRTMSKT 276

[Close]

BLAST of Lag0033960 vs. NCBI nr
Match: XP_011649113.1 (AT-hook motif nuclear-localized protein 16 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-61
Identity = 158/289 (54.67%), Postives = 177/289 (61.25%), Query Frame = 0


Query: 1   MAGGDQ-DMAVHSLGSKVSSVVSDHEPEKCANN---ANHQQRPCFDPSLVSPKAVPPISV 60
           MAGGDQ DMAVHSLGSK+ S++SDHEPEKC NN    NHQQRPCFDPSLVSPK VPPISV
Sbjct: 3   MAGGDQADMAVHSLGSKL-SLISDHEPEKCGNNNVTNNHQQRPCFDPSLVSPKVVPPISV 62

Query: 61  AAEADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG-- 120
           AAE+DQALRRPRG   G K     P            ++  R +  A+   A  +S G  
Sbjct: 63  AAESDQALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSTGCD 122

Query: 121 --GSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR------ 180
              S   FA   +     ++G    T  T+R   S              ++LG       
Sbjct: 123 VNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPPA 182

Query: 181 ----------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAMQ 240
                      + A G+  GG   G      PVVIMAATFMNATFDRLPSDD+EVAA MQ
Sbjct: 183 PSGITGLTIYLSGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVAATMQ 242

Query: 241 SQHYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 250
           SQHYGQNGRSHHHLDVSDLYGVPQNLITNS+LPPELYSWA AGRTMSKT
Sbjct: 243 SQHYGQNGRSHHHLDVSDLYGVPQNLITNSSLPPELYSWATAGRTMSKT 278

[Close]

BLAST of Lag0033960 vs. NCBI nr
Match: KAA0058128.1 (AT-hook motif nuclear-localized protein 16 [Cucumis melo var. makuwa] >TYK28482.1 AT-hook motif nuclear-localized protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 242.3 bits (617), Expect = 4.5e-60
Identity = 155/290 (53.45%), Postives = 177/290 (61.03%), Query Frame = 0


Query: 1   MAGGDQ-DMAVHSLGSKVSSVVSDHEPEKCANN----ANHQQRPCFDPSLVSPKAVPPIS 60
           MAGGDQ DMAVHSLGSK+ S++S+HEPEKC +N     NHQQRPCFDPSLVSPK VPPIS
Sbjct: 1   MAGGDQADMAVHSLGSKL-SLISEHEPEKCGSNNNVTNNHQQRPCFDPSLVSPKVVPPIS 60

Query: 61  VAAEADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG- 120
           VAAE+DQALRRPRG   G K     P            ++  R +  A+   A  +S G 
Sbjct: 61  VAAESDQALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSSGC 120

Query: 121 ---GSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR----- 180
               S   FA   +     ++G    T  T+R   S              ++LG      
Sbjct: 121 DVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPP 180

Query: 181 -----------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAM 240
                       + A G+  GG   G      PVVIMAATFMNATFDRLPSDD+EVAA M
Sbjct: 181 APSGITGLTIYLSGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVAATM 240

Query: 241 QSQHYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 250
           QSQHYGQNGRSHHHLDVSDLYGVPQNLITNS+LPPELY+WA AGRTMSKT
Sbjct: 241 QSQHYGQNGRSHHHLDVSDLYGVPQNLITNSSLPPELYTWATAGRTMSKT 277

[Close]

BLAST of Lag0033960 vs. NCBI nr
Match: XP_008453469.1 (PREDICTED: AT-hook motif nuclear-localized protein 16 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 4.5e-60
Identity = 155/290 (53.45%), Postives = 177/290 (61.03%), Query Frame = 0


Query: 1   MAGGDQ-DMAVHSLGSKVSSVVSDHEPEKCANN----ANHQQRPCFDPSLVSPKAVPPIS 60
           MAGGDQ DMAVHSLGSK+ S++S+HEPEKC +N     NHQQRPCFDPSLVSPK VPPIS
Sbjct: 3   MAGGDQADMAVHSLGSKL-SLISEHEPEKCGSNNNVTNNHQQRPCFDPSLVSPKVVPPIS 62

Query: 61  VAAEADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG- 120
           VAAE+DQALRRPRG   G K     P            ++  R +  A+   A  +S G 
Sbjct: 63  VAAESDQALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSSGC 122

Query: 121 ---GSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR----- 180
               S   FA   +     ++G    T  T+R   S              ++LG      
Sbjct: 123 DVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPP 182

Query: 181 -----------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAM 240
                       + A G+  GG   G      PVVIMAATFMNATFDRLPSDD+EVAA M
Sbjct: 183 APSGITGLTIYLSGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVAATM 242

Query: 241 QSQHYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 250
           QSQHYGQNGRSHHHLDVSDLYGVPQNLITNS+LPPELY+WA AGRTMSKT
Sbjct: 243 QSQHYGQNGRSHHHLDVSDLYGVPQNLITNSSLPPELYTWATAGRTMSKT 279

[Close]

BLAST of Lag0033960 vs. ExPASy Swiss-Prot
Match: Q9SJG4 (AT-hook motif nuclear-localized protein 16 OS=Arabidopsis thaliana OX=3702 GN=AHL16 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.3e-16
Identity = 93/277 (33.57%), Postives = 127/277 (45.85%), Query Frame = 0


Query: 1   MAGGDQDMAVHSLGSKVSSVVSDHEPEKCANNANHQQRPCFDPSLVSPKAVPPISVAAEA 60
           MAGG   +   S+GSK S  + +HE  +  N  N+ +          PKAV P+S + E 
Sbjct: 1   MAGGTA-LTPTSVGSK-SVPMRNHEATERGNTNNNLR--------ALPKAVQPVS-SIEG 60

Query: 61  DQALR---RPRGARPGPK----TSRNHPLSLPEIAPMLSGLMPLRSALAAMSMR------ 120
           + A R   RP G++  PK     + + P SL   A  +S    +   L+  + R      
Sbjct: 61  EMAKRPRGRPAGSKNKPKPPIIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQRGLC 120

Query: 121 -------------ASPISPGG---SSGEFAFLAELRDSFVAGIDLATTSTVRDHRSDNLL 180
                          P S G      G +  L+ L         L  T       +  L 
Sbjct: 121 ILSANGCVTNVTLRQPASSGAIVTLHGRYEILSLLGSILPPPAPLGITGL-----TIYLA 180

Query: 181 GRRTRAGGRRSGGGRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAMQSQHYGQNGRSH 240
           G + +  G    GG      PVV+MAA+FMNA FDRLP DDDE AA+MQ+Q Y QNGRS 
Sbjct: 181 GPQGQVVGGGVVGGLI-ASGPVVLMAASFMNAVFDRLPMDDDE-AASMQNQQYYQNGRSR 240

Query: 241 HHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSK 249
               + D++G+PQNL+TN     ++YSW  A R MSK
Sbjct: 241 ---PLDDIHGLPQNLLTNGNSASDIYSWGPAQRVMSK 256

[Close]

BLAST of Lag0033960 vs. ExPASy TrEMBL
Match: A0A5A7USJ9 (AT-hook motif nuclear-localized protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001160 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.2e-60
Identity = 155/290 (53.45%), Postives = 177/290 (61.03%), Query Frame = 0


Query: 1   MAGGDQ-DMAVHSLGSKVSSVVSDHEPEKCANN----ANHQQRPCFDPSLVSPKAVPPIS 60
           MAGGDQ DMAVHSLGSK+ S++S+HEPEKC +N     NHQQRPCFDPSLVSPK VPPIS
Sbjct: 1   MAGGDQADMAVHSLGSKL-SLISEHEPEKCGSNNNVTNNHQQRPCFDPSLVSPKVVPPIS 60

Query: 61  VAAEADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG- 120
           VAAE+DQALRRPRG   G K     P            ++  R +  A+   A  +S G 
Sbjct: 61  VAAESDQALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSSGC 120

Query: 121 ---GSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR----- 180
               S   FA   +     ++G    T  T+R   S              ++LG      
Sbjct: 121 DVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPP 180

Query: 181 -----------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAM 240
                       + A G+  GG   G      PVVIMAATFMNATFDRLPSDD+EVAA M
Sbjct: 181 APSGITGLTIYLSGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVAATM 240

Query: 241 QSQHYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 250
           QSQHYGQNGRSHHHLDVSDLYGVPQNLITNS+LPPELY+WA AGRTMSKT
Sbjct: 241 QSQHYGQNGRSHHHLDVSDLYGVPQNLITNSSLPPELYTWATAGRTMSKT 277

[Close]

BLAST of Lag0033960 vs. ExPASy TrEMBL
Match: A0A1S3BX46 (AT-hook motif nuclear-localized protein 16 OS=Cucumis melo OX=3656 GN=LOC103494172 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.2e-60
Identity = 155/290 (53.45%), Postives = 177/290 (61.03%), Query Frame = 0


Query: 1   MAGGDQ-DMAVHSLGSKVSSVVSDHEPEKCANN----ANHQQRPCFDPSLVSPKAVPPIS 60
           MAGGDQ DMAVHSLGSK+ S++S+HEPEKC +N     NHQQRPCFDPSLVSPK VPPIS
Sbjct: 3   MAGGDQADMAVHSLGSKL-SLISEHEPEKCGSNNNVTNNHQQRPCFDPSLVSPKVVPPIS 62

Query: 61  VAAEADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG- 120
           VAAE+DQALRRPRG   G K     P            ++  R +  A+   A  +S G 
Sbjct: 63  VAAESDQALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSSGC 122

Query: 121 ---GSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR----- 180
               S   FA   +     ++G    T  T+R   S              ++LG      
Sbjct: 123 DVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPP 182

Query: 181 -----------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAM 240
                       + A G+  GG   G      PVVIMAATFMNATFDRLPSDD+EVAA M
Sbjct: 183 APSGITGLTIYLSGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVAATM 242

Query: 241 QSQHYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 250
           QSQHYGQNGRSHHHLDVSDLYGVPQNLITNS+LPPELY+WA AGRTMSKT
Sbjct: 243 QSQHYGQNGRSHHHLDVSDLYGVPQNLITNSSLPPELYTWATAGRTMSKT 279

[Close]

BLAST of Lag0033960 vs. ExPASy TrEMBL
Match: A0A6J1C2K6 (AT-hook motif nuclear-localized protein 16 OS=Momordica charantia OX=3673 GN=LOC111007358 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 2.0e-58
Identity = 157/289 (54.33%), Postives = 172/289 (59.52%), Query Frame = 0


Query: 2   AGGDQDMAVHSLGSKVSSVVSDHEPEKCA----NNANHQQRPCFDP-SLVSPKAVPPISV 61
           A GDQDMA+HSLGSKV SV+SDHEPEKC     N  NHQQRPCFDP SLVSPKAVPPISV
Sbjct: 6   AAGDQDMALHSLGSKV-SVLSDHEPEKCGHVNNNVGNHQQRPCFDPNSLVSPKAVPPISV 65

Query: 62  AAEADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG-- 121
           AAE DQALRRPRG   G K     P            ++  R +  A+   A  +S G  
Sbjct: 66  AAEGDQALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSSGCD 125

Query: 122 --GSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR------ 181
              S   FA   +     ++G    T  T+R   S              +LLG       
Sbjct: 126 VNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSLLGSILPPPA 185

Query: 182 ----------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAMQ 241
                        A G+  GG   G      PVVIMAATFMNATFDRLPSDDDE  AAMQ
Sbjct: 186 PSGIAGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDDEATAAMQ 245

Query: 242 SQHYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 250
           SQHY QNGRSHHHLDVSDLYGVPQNLITN+TLPP+LYSWAAAGRTMSKT
Sbjct: 246 SQHY-QNGRSHHHLDVSDLYGVPQNLITNTTLPPDLYSWAAAGRTMSKT 280

[Close]

BLAST of Lag0033960 vs. ExPASy TrEMBL
Match: A0A6J1JFT0 (AT-hook motif nuclear-localized protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111485346 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 3.9e-49
Identity = 140/287 (48.78%), Postives = 156/287 (54.36%), Query Frame = 0


Query: 1   MAGGDQDMAVHSLGSKVSSVVSDHEPEKCANNANHQQRPC-FDP-SLVSPKAVPPISVAA 60
           M GGDQ                DHEPEKC N  NHQQRP  FDP SLVSPKAVPPIS A 
Sbjct: 1   MTGGDQ----------------DHEPEKCGNATNHQQRPASFDPSSLVSPKAVPPISAAP 60

Query: 61  EADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG---- 120
           E D ALRRPRG   G K     P            ++  R +  A+   A  +S G    
Sbjct: 61  ETDHALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSSGCDVN 120

Query: 121 GSSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR-------- 180
            S   FA   +     ++G    T  T+R   S              ++LG         
Sbjct: 121 ESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPPAPS 180

Query: 181 --------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAMQSQ 240
                      A G+  GG   G      PVVIMAATFMNATFDRLPSDD+EVA+A+QSQ
Sbjct: 181 GITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVASAIQSQ 240

Query: 241 HYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 250
           HYGQNGRSHHH+DVSDLYGVPQNLITNS LPPELYSWAAAGRTMSKT
Sbjct: 241 HYGQNGRSHHHVDVSDLYGVPQNLITNSALPPELYSWAAAGRTMSKT 259

[Close]

BLAST of Lag0033960 vs. ExPASy TrEMBL
Match: A0A6J1F0I6 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111441049 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 137/275 (49.82%), Postives = 152/275 (55.27%), Query Frame = 0


Query: 1   MAGGDQDMAVHSLGSKVSSVVSDHEPEKCANNANHQQRPCFDP-SLVSPKAVPPISVAAE 60
           MAG DQDMAV             HEP+KCANNA+HQQRPCFDP SL+SPKAVPPISVAAE
Sbjct: 1   MAGSDQDMAV-------------HEPQKCANNADHQQRPCFDPSSLLSPKAVPPISVAAE 60

Query: 61  ADQALRRPRGARPGPKTSRNHPLSLPEIAPMLSGLMPLRSALAAMSMRASPISPG----G 120
           +D ALRRPRG   G K     P            ++  R +  A+   A  +S G     
Sbjct: 61  SDHALRRPRGRPAGSKNKPKPP------------IIVTRDSANALRAHAIEVSSGCDVNE 120

Query: 121 SSGEFAFLAELRDSFVAGIDLATTSTVRDHRSD-------------NLLGR--------- 180
           S   FA   +     ++G       T+R   S              +LLG          
Sbjct: 121 SLSSFARRKQRGVCILSGSGCVVNVTLRQAASSGAIVTLHGRFEIVSLLGSILPPPAPLG 180

Query: 181 -------RTRAGGRRSGG---GRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAMQSQH 239
                     A G+  GG   G      PVVIMAATFMNATFDRLPSDDDEV AAM SQH
Sbjct: 181 ITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDDEVTAAMHSQH 240

[Close]

BLAST of Lag0033960 vs. TAIR 10
Match: AT2G42940.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 85.5 bits (210), Expect = 6.6e-17
Identity = 93/277 (33.57%), Postives = 127/277 (45.85%), Query Frame = 0


Query: 1   MAGGDQDMAVHSLGSKVSSVVSDHEPEKCANNANHQQRPCFDPSLVSPKAVPPISVAAEA 60
           MAGG   +   S+GSK S  + +HE  +  N  N+ +          PKAV P+S + E 
Sbjct: 1   MAGGTA-LTPTSVGSK-SVPMRNHEATERGNTNNNLR--------ALPKAVQPVS-SIEG 60

Query: 61  DQALR---RPRGARPGPK----TSRNHPLSLPEIAPMLSGLMPLRSALAAMSMR------ 120
           + A R   RP G++  PK     + + P SL   A  +S    +   L+  + R      
Sbjct: 61  EMAKRPRGRPAGSKNKPKPPIIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQRGLC 120

Query: 121 -------------ASPISPGG---SSGEFAFLAELRDSFVAGIDLATTSTVRDHRSDNLL 180
                          P S G      G +  L+ L         L  T       +  L 
Sbjct: 121 ILSANGCVTNVTLRQPASSGAIVTLHGRYEILSLLGSILPPPAPLGITGL-----TIYLA 180

Query: 181 GRRTRAGGRRSGGGRAHCFWPVVIMAATFMNATFDRLPSDDDEVAAAMQSQHYGQNGRSH 240
           G + +  G    GG      PVV+MAA+FMNA FDRLP DDDE AA+MQ+Q Y QNGRS 
Sbjct: 181 GPQGQVVGGGVVGGLI-ASGPVVLMAASFMNAVFDRLPMDDDE-AASMQNQQYYQNGRSR 240

Query: 241 HHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSK 249
               + D++G+PQNL+TN     ++YSW  A R MSK
Sbjct: 241 ---PLDDIHGLPQNLLTNGNSASDIYSWGPAQRVMSK 256

[Close]

BLAST of Lag0033960 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 25/77 (32.47%), Postives = 39/77 (50.65%), Query Frame = 0


Query: 169 CFWPVVIMAATFMNATFDRLPSDDDEVAAAMQSQHYG-----------QNGRSHHHLDVS 228
           C  PVV+MAA+F NA ++RLP ++DE+   +Q    G             G+      ++
Sbjct: 247 CSGPVVVMAASFSNAAYERLPLEEDEMQTPVQGGGGGGGGGGGMGSPPMMGQQQAMAAMA 306

Query: 229 DLYGVPQNLITNSTLPP 235
              G+P NL+ +  LPP
Sbjct: 307 AAQGLPPNLLGSVQLPP 323

[Close]

BLAST of Lag0033960 vs. TAIR 10
Match: AT3G60870.1 (AT-hook motif nuclear-localized protein 18 )

HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04
Identity = 24/70 (34.29%), Postives = 38/70 (54.29%), Query Frame = 0


Query: 172 PVVIMAATFMNATFDRLPSDDDEVAA----AMQSQHYGQNGRSHHHLDVSDLYGVPQNLI 231
           PVV+MAA+F NA+++RLP +++E          ++  G   +     D +   G P NLI
Sbjct: 188 PVVVMAASFGNASYERLPLEEEEETEREIDGNAARAIGTQTQKQLMQDATSFIGSPSNLI 247

Query: 232 TNSTLPPELY 238
            + +LP E Y
Sbjct: 248 NSVSLPGEAY 257

[Close]

BLAST of Lag0033960 vs. TAIR 10
Match: AT4G14465.1 (AT-hook motif nuclear-localized protein 20 )

HSP 1 Score: 42.7 bits (99), Expect = 4.9e-04
Identity = 26/79 (32.91%), Postives = 41/79 (51.90%), Query Frame = 0


Query: 173 VVIMAATFMNATFDRLPSDDDEVAAAMQSQHYGQNGRSHHHLDVSDL-------YGVPQN 232
           V+++AATF NAT++RLP +++E     +  H G +       ++ DL       Y +P +
Sbjct: 199 VMVIAATFSNATYERLPMEEEEDGGGSRQIHGGGDSPPRIGSNLPDLSGMAGPGYNMPPH 258

Query: 233 LITNST--LPPELYSWAAA 243
           LI N    L  E Y+W  A
Sbjct: 259 LIPNGAGQLGHEPYTWVHA 277

[Close]

BLAST of Lag0033960 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 42.0 bits (97), Expect = 8.4e-04
Identity = 25/71 (35.21%), Postives = 36/71 (50.70%), Query Frame = 0


Query: 169 CFWPVVIMAATFMNATFDRLPSDDDEVAAAMQSQHYGQNGRS------------HHHLDV 228
           C  PVV+MAA+F NA ++RLP ++DE+   +   H G  G S            H    +
Sbjct: 236 CAGPVVVMAASFSNAAYERLPLEEDEMQTPV---HGGGGGGSLESPPMMGQQLQHQQQAM 295

The following BLAST results are available for this feature:

BLAST of Lag0033960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880552.1	6.7e-64	55.75	AT-hook motif nuclear-localized protein 16 [Benincasa hispida]	[more]
KAE8652473.1	1.4e-61	54.67	hypothetical protein Csa_013658 [Cucumis sativus]	[more]
XP_011649113.1	1.4e-61	54.67	AT-hook motif nuclear-localized protein 16 [Cucumis sativus]	[more]
KAA0058128.1	4.5e-60	53.45	AT-hook motif nuclear-localized protein 16 [Cucumis melo var. makuwa] >TYK28482....	[more]
XP_008453469.1	4.5e-60	53.45	PREDICTED: AT-hook motif nuclear-localized protein 16 [Cucumis melo]	[more]

BLAST of Lag0033960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJG4	9.3e-16	33.57	AT-hook motif nuclear-localized protein 16 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of Lag0033960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7USJ9	2.2e-60	53.45	AT-hook motif nuclear-localized protein 16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BX46	2.2e-60	53.45	AT-hook motif nuclear-localized protein 16 OS=Cucumis melo OX=3656 GN=LOC1034941...	[more]
A0A6J1C2K6	2.0e-58	54.33	AT-hook motif nuclear-localized protein 16 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1JFT0	3.9e-49	48.78	AT-hook motif nuclear-localized protein 16-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F0I6	1.1e-48	49.82	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Lag0033960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42940.1	6.6e-17	33.57	Predicted AT-hook DNA-binding family protein	[more]
AT4G12050.1	1.3e-04	32.47	Predicted AT-hook DNA-binding family protein	[more]
AT3G60870.1	1.7e-04	34.29	AT-hook motif nuclear-localized protein 18	[more]
AT4G14465.1	4.9e-04	32.91	AT-hook motif nuclear-localized protein 20	[more]
AT4G22810.1	8.4e-04	35.21	Predicted AT-hook DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR31100:SF77	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN	coord: 161..248
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 161..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033960.1	Lag0033960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050794	regulation of cellular process
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding