Lag0033824 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACGAGATGGAACGGGAAGAAGAAACGAGAACAGGAGCGGAGGACGAAGAAGTTGCCGGTTTACCTTCTCTGCCTGAAGGAGTAATAGCTAACATCTTGTCGCTCACGCCTCCATCTGATGCCTGCAGGTCGTCGGCGGTTTCTCGGACTTTCCATGCGGCGGCGCAGTCCGATATCGTGTGGGACAGATTCCTGCCTAACGATCTGGACGTTTTGATTTCTCGGAGGAATTCCGATCACCTGAATTTTAATCTAATTTCCAATTCGAAGAAGGAGATCTTTTTCTTCCTTTGCGACAACCCATTGCTAATTGACGGCGGCAAGAAGGTAAGGTTTCCGATTCCTCCCAATTTCTCTAAATTGGTGGTGGCCGGAGATGGACGAGTGGTCGGCAGACACAACTCTTACTCCGGCCATACCATCATCCGAAGCCCGCCCTTGTATTGTAATGAAACGAATACTTTCCGAGAACATTAA ATGAACGAGATGGAACGGGAAGAAGAAACGAGAACAGGAGCGGAGGACGAAGAAGTTGCCGGTTTACCTTCTCTGCCTGAAGGAGTAATAGCTAACATCTTGTCGCTCACGCCTCCATCTGATGCCTGCAGGTCGTCGGCGGTTTCTCGGACTTTCCATGCGGCGGCGCAGTCCGATATCGTGTGGGACAGATTCCTGCCTAACGATCTGGACGTTTTGATTTCTCGGAGGAATTCCGATCACCTGAATTTTAATCTAATTTCCAATTCGAAGAAGGAGATCTTTTTCTTCCTTTGCGACAACCCATTGCTAATTGACGGCGGCAAGAAGGTAAGGTTTCCGATTCCTCCCAATTTCTCTAAATTGGTGGTGGCCGGAGATGGACGAGTGGTCGGCAGACACAACTCTTACTCCGGCCATACCATCATCCGAAGCCCGCCCTTGTATTGTAATGAAACGAATACTTTCCGAGAACATTAA ATGAACGAGATGGAACGGGAAGAAGAAACGAGAACAGGAGCGGAGGACGAAGAAGTTGCCGGTTTACCTTCTCTGCCTGAAGGAGTAATAGCTAACATCTTGTCGCTCACGCCTCCATCTGATGCCTGCAGGTCGTCGGCGGTTTCTCGGACTTTCCATGCGGCGGCGCAGTCCGATATCGTGTGGGACAGATTCCTGCCTAACGATCTGGACGTTTTGATTTCTCGGAGGAATTCCGATCACCTGAATTTTAATCTAATTTCCAATTCGAAGAAGGAGATCTTTTTCTTCCTTTGCGACAACCCATTGCTAATTGACGGCGGCAAGAAGGTAAGGTTTCCGATTCCTCCCAATTTCTCTAAATTGGTGGTGGCCGGAGATGGACGAGTGGTCGGCAGACACAACTCTTACTCCGGCCATACCATCATCCGAAGCCCGCCCTTGTATTGTAATGAAACGAATACTTTCCGAGAACATTAA MNEMEREEETRTGAEDEEVAGLPSLPEGVIANILSLTPPSDACRSSAVSRTFHAAAQSDIVWDRFLPNDLDVLISRRNSDHLNFNLISNSKKEIFFFLCDNPLLIDGGKKVRFPIPPNFSKLVVAGDGRVVGRHNSYSGHTIIRSPPLYCNETNTFREH Homology
BLAST of Lag0033824 vs. NCBI nr
Match: XP_022134921.1 (F-box protein PP2-B10-like isoform X1 [Momordica charantia]) HSP 1 Score: 152.1 bits (383), Expect = 3.9e-33 Identity = 80/111 (72.07%), Postives = 85/111 (76.58%), Query Frame = 0
BLAST of Lag0033824 vs. NCBI nr
Match: XP_022134922.1 (F-box protein PP2-B10-like isoform X2 [Momordica charantia]) HSP 1 Score: 151.4 bits (381), Expect = 6.7e-33 Identity = 79/109 (72.48%), Postives = 84/109 (77.06%), Query Frame = 0
BLAST of Lag0033824 vs. NCBI nr
Match: XP_022929428.1 (F-box protein PP2-B10-like [Cucurbita moschata]) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-30 Identity = 74/102 (72.55%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of Lag0033824 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida]) HSP 1 Score: 142.5 bits (358), Expect = 3.1e-30 Identity = 72/104 (69.23%), Postives = 82/104 (78.85%), Query Frame = 0
BLAST of Lag0033824 vs. NCBI nr
Match: KAG7021736.1 (F-box protein PP2-B10 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.7 bits (356), Expect = 5.3e-30 Identity = 74/106 (69.81%), Postives = 84/106 (79.25%), Query Frame = 0
BLAST of Lag0033824 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 7.0e-17 Identity = 47/103 (45.63%), Postives = 71/103 (68.93%), Query Frame = 0
BLAST of Lag0033824 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.5e-16 Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Lag0033824 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2) HSP 1 Score: 84.0 bits (206), Expect = 1.7e-15 Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Lag0033824 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14 Identity = 48/110 (43.64%), Postives = 72/110 (65.45%), Query Frame = 0
BLAST of Lag0033824 vs. ExPASy Swiss-Prot
Match: Q9ZVQ9 (F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.2e-14 Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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