Lag0033813 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033813
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DUF676 domain-containing protein
Location	chr3: 2053144 .. 2054982 (-)
RNA-Seq Expression	Lag0033813
Synteny	Lag0033813

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGGTGGAGAACATCATCTATTCGTCGTCAACATGAGCTTCCAAAGGTAAGGTTTGTGTATTAATTGTTCTCCATTTATGTTTCCTAAGCCTTTTCTGGAGGAAGATTAAACGCTTATTTTCTTCTTATTCCATGACCAGTCAAGTGTGCTTCTGACAAATGACAAATACCCACATATTGTCTATGTGGAGCAATCAAGCCCCGATGACGTCTGCAATAACTCATCGCTGGTTATAGATCAAAAACTCGACTTAGAAGGTTACCTTCTCCCAGCTCCTGCTCTAAGATCTCTCCTTCTCTCTCTAATATCTCCTATATTTCTGTTAGTTATCTGATGCCTTGTAGTTAAACTATATTAGAAATGAATCTCTTTGGTAAAAAGTTCAGAAAATAAATTAAATCATTTTATTCCATTAGAGAAAAACCTTGAAGTTTCTACCAATTTTTTAGAAATTTGGAGGTTGAATTAGAAACTTTGCTCTCTTAGATGACCTTTTTTTGCCGGTTTACGAAATATTATTACAGGTAAGTTTATCATTAGCCAATTTTAACATTCACCTATAGTAAGAGACTAAATCTTAAACATTAGGGACTGAAACATATATTTAGCCTTATTTTTGTGTGGTCCTACCTAGATCTAAGAAAGGAGAAGAGTGTTTTATGAGTAGAAGAGAGATTAAAAATTAGCCAAATTAGGTGAGAACTCAATAGCATGCCGCTGTTCTTGTCACCATCTATATTCTCTTTGTGCCTAATTCTGAATTTCTCCTGTTTAGCCTTACTTGTGGTTGAAATAGTTTTTTTCTTATAATATGTAGAGGAGATGATTAGAGGGCTTAATCAAGTTCCTTGGACACGAGTGGATGTTAGTTTTCAAAAAAGCAGACAGAGATACATTGCTCACAGTACCATACAGGCAAGTATAGAATGAAGTAGTTTCAAAGAAAAAACAAGTCTAGAGTGAAGTGATTTCTGGGAATATCTTTGTTCAAATTGTATCTTTATTCAATTATATACTGTTTAAATCCCATTTTGGCCTATAAAATTTTAGTTTTTACCTATTTTTGGTTGCTGAACCTTCAAAATATTTATTTTAGTCCCTAAATTTTATTAAACCAATCATTTTGTTTCGAACTTTCAAAATGTGTATTTTAAACTTAAAAAAACAAAAACCATTTTGGTTTTTGTTATTATTCTGTTAGACTGTTGCTTAATATCATCCACCCACCTACTACTTGTCTCAACCAAACTGTGCTGTTCTAGATTATGCTCACTTCAGTACGTTATACAAATATTTGAAGTCACCTTATCCATGTGCTAAAACAATTGATAACTATTTTGGAAATAAGGATGAACAATTGATGACAACTTACGAGAATAACCTGTTGTCAAAAAAAAAAAAAAAAACTTACGAGAAGAATCAAAATGTTTCTTTAATATCAAGTCAAGGGACTAATAGACATTTTAGACATTTTAAAGTTCATGACTGAGATGGAATAAACTTAAAAGTTTAGGGACTAAAATAGGCATGTTAAGACTCGAGAGTATGAAGGCAACATAGAATAACCCAAAGCACCACAATAGAATTTAAACCATTGTTTATTTTTCAGATTTACAGTATAAGAATATAGTTGGCTTCTGAACAAGAACAACTATTGCTTAAGCATCGGCTCTCAGTACCGCTGTTCTGATATTTGTAATTCTTTTCCCATTTTAGACGTGTACATATCTGACGTTTTAAGACAACATTTGATGGCTTCAGGTAAAGAGCTATTGGCTGAATTCTGATGGTGCAGATGTGGTTTTCCACATGATCGATAACTTTGTTTTATAA

mRNA sequence

ATGGTTGGGTGGAGAACATCATCTATTCGTCGTCAACATGAGCTTCCAAAGTCAAGTGTGCTTCTGACAAATGACAAATACCCACATATTGTCTATGTGGAGCAATCAAGCCCCGATGACGTCTGCAATAACTCATCGCTGGTTATAGATCAAAAACTCGACTTAGAAGAGGAGATGATTAGAGGGCTTAATCAAGTTCCTTGGACACGAGTGGATGTTAGTTTTCAAAAAAGCAGACAGAGATACATTGCTCACAGTACCATACAGGTAAAGAGCTATTGGCTGAATTCTGATGGTGCAGATGTGGTTTTCCACATGATCGATAACTTTGTTTTATAA

Coding sequence (CDS)

ATGGTTGGGTGGAGAACATCATCTATTCGTCGTCAACATGAGCTTCCAAAGTCAAGTGTGCTTCTGACAAATGACAAATACCCACATATTGTCTATGTGGAGCAATCAAGCCCCGATGACGTCTGCAATAACTCATCGCTGGTTATAGATCAAAAACTCGACTTAGAAGAGGAGATGATTAGAGGGCTTAATCAAGTTCCTTGGACACGAGTGGATGTTAGTTTTCAAAAAAGCAGACAGAGATACATTGCTCACAGTACCATACAGGTAAAGAGCTATTGGCTGAATTCTGATGGTGCAGATGTGGTTTTCCACATGATCGATAACTTTGTTTTATAA

Protein sequence

MVGWRTSSIRRQHELPKSSVLLTNDKYPHIVYVEQSSPDDVCNNSSLVIDQKLDLEEEMIRGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL

Homology

[Close]

BLAST of Lag0033813 vs. NCBI nr
Match: XP_022135222.1 (putative lipase YDR444W [Momordica charantia])

HSP 1 Score: 215.3 bits (547), Expect = 2.7e-52
Identity = 102/112 (91.07%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MVGWRTSSIRRQHELPKSSVLLTNDKYPHIVYVEQSSPDDVCNNSSLVIDQKLDLEEEMI 60
           MVGWRTSSIRRQHELPKSSVL+TNDKYPHIV+VEQSSPDD+ N +SL+IDQK+DLEEEMI
Sbjct: 320 MVGWRTSSIRRQHELPKSSVLMTNDKYPHIVFVEQSSPDDIFNKASLIIDQKVDLEEEMI 379

Query: 61  RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL 113
           RGLNQVPW RVDVSFQKSRQRYIAH+TIQVKSYWLNSDGADVVFHMIDNFVL
Sbjct: 380 RGLNQVPWIRVDVSFQKSRQRYIAHNTIQVKSYWLNSDGADVVFHMIDNFVL 431

[Close]

BLAST of Lag0033813 vs. NCBI nr
Match: XP_038879828.1 (putative lipase ROG1 isoform X1 [Benincasa hispida])

HSP 1 Score: 211.1 bits (536), Expect = 5.0e-51
Identity = 102/112 (91.07%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MVGWRTSSIRRQHELPKSSVLLTNDKYPHIVYVEQSSPDDVCNNSSLVIDQKLDLEEEMI 60
           MVGWRTSSIRRQHELPKSS L+ NDKYPHIVY EQS+ DDVCN + LVIDQK DLEEEMI
Sbjct: 316 MVGWRTSSIRRQHELPKSSELMKNDKYPHIVYEEQSTHDDVCNKALLVIDQKFDLEEEMI 375

Query: 61  RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL 113
           RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL
Sbjct: 376 RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL 427

[Close]

BLAST of Lag0033813 vs. NCBI nr
Match: XP_022988513.1 (uncharacterized protein LOC111485732 isoform X1 [Cucurbita maxima])

HSP 1 Score: 210.3 bits (534), Expect = 8.6e-51
Identity = 102/112 (91.07%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MVGWRTSSIRRQHELPKSSVLLTNDKYPHIVYVEQSSPDDVCNNSSLVIDQKLDLEEEMI 60
           MVGWRTSSIRRQHELP SS L TNDKYPHIVY EQS  DD+CN +SLVIDQ LDLEEEMI
Sbjct: 321 MVGWRTSSIRRQHELPTSSKLTTNDKYPHIVYEEQSRMDDICNKASLVIDQTLDLEEEMI 380

Query: 61  RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL 113
           RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL
Sbjct: 381 RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL 432

[Close]

BLAST of Lag0033813 vs. NCBI nr
Match: XP_023516856.1 (uncharacterized protein LOC111780634 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 101/112 (90.18%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MVGWRTSSIRRQHELPKSSVLLTNDKYPHIVYVEQSSPDDVCNNSSLVIDQKLDLEEEMI 60
           MVGWRTSSIRRQHELP SS L TNDKYPHIVY EQS  DD+CN +SLV+DQ LDLEEEMI
Sbjct: 321 MVGWRTSSIRRQHELPTSSELTTNDKYPHIVYEEQSRMDDICNKASLVLDQTLDLEEEMI 380

Query: 61  RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL 113
           RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL
Sbjct: 381 RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL 432

[Close]

BLAST of Lag0033813 vs. NCBI nr
Match: KAG6589726.1 (hypothetical protein SDJN03_15149, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 101/112 (90.18%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MVGWRTSSIRRQHELPKSSVLLTNDKYPHIVYVEQSSPDDVCNNSSLVIDQKLDLEEEMI 60
           MVGWRTSSIRRQHELP SS L TNDKYPHIVY EQS  DD+CN +SLV+DQ LDLEEEMI
Sbjct: 1   MVGWRTSSIRRQHELPTSSELTTNDKYPHIVYEEQSRMDDICNKASLVLDQTLDLEEEMI 60

Query: 61  RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL 113
           RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL
Sbjct: 61  RGLNQVPWTRVDVSFQKSRQRYIAHSTIQVKSYWLNSDGADVVFHMIDNFVL 112

The following BLAST results are available for this feature:

BLAST of Lag0033813 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135222.1	2.7e-52	91.07	putative lipase YDR444W [Momordica charantia]	[more]
XP_038879828.1	5.0e-51	91.07	putative lipase ROG1 isoform X1 [Benincasa hispida]	[more]
XP_022988513.1	8.6e-51	91.07	uncharacterized protein LOC111485732 isoform X1 [Cucurbita maxima]	[more]
XP_023516856.1	1.5e-50	90.18	uncharacterized protein LOC111780634 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6589726.1	1.5e-50	90.18	hypothetical protein SDJN03_15149, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lag0033813 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044294	Lipase-like	PANTHER	PTHR12482	UNCHARACTERIZED	coord: 1..112
None	No IPR available	PANTHER	PTHR12482:SF55	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033813.1	Lag0033813.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044255	cellular lipid metabolic process