Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGAAAGAGATGGAAGTGGTGAAAGGTTTGGAGCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCATCAAGAAATCAGCCAAAGAATGGTGTGAACACAAGGGCTAATTATGCACTCAAAGAAGATGGAACTGTGAATGTGGTGAATGAAACTTGGAGTGATGGAAAGAGAAGTTCTATAGAAGGTGTGGCTTTCAAGGCTGAGCCTTCGAGCGAGGAGGCCAAGTTCAAGGTCAAATTCTATCTGCCACCTTTTCTTCCAATCATTCCAGTTGTTGGGAATTACTGGGTTTTGTATATTGATGATGATTATCAGTATGTCCTGATTGGAGAACCTTCAAGGAAGAATCTTTGGGTATGTTTTCAGAATCCTTCTCCTGTTTCTCACTTTCTCACAGCAAATTTTCATATTCTGGGCTTGTGTTTTTCTTGTTTGTTAGACTTAAGGGTTGTTCCAATTTAACTTCATGATTTAAGAGTATCATATTTCAAAATATTTTTTGTTGTTATAAGATATGTTTTCTATGAAAGTGGTTGAGAAGGATTGTGCATTTGGGAAGTTATGTTCCAAGGATGATGGTTTTTTCTTTTCTGAGGCGAGTTCTATTAAAGGGATAGCTTCTTAAAAAGTGGTCTAATCCCAGTTTTGTTTATCAAAAACCTTAAACCTTGAAACCAAGTTCTTCAAACTTGTTTCTTCCTTTATCCAAAACCCCCATTACTAGAGATTTGAGATTGGTTACGAGTGTTTATAGAACAAGCCTAATTTTATAAGTATTCATTTTTTATTTCTACATGGAACATTTTTATTTCAAAGAGAGACATCTTGGTGCTGGGTTTAACACTTTTTTTTCCTTTTTGGTGGCTAGGTTTAAACTTCTTTTAATTGAATTTTAACTATTTTCTTGATAAATGTTGAATGGTCTATGGATTACTTTTATAATTTGACTTGAAGAAAAAGAAAGGGTAATCTTAGCACTTAAGGAAGTTTGACTTTAAATTTAAAAATAGCTCTGCGAGATTAAAACAATTTCCCCCATATATTGTATTAAGAATCTGTGGTGTATTGGCAGATCTTGTGCAGAGATACTCATCTTAACGAGGAGATATATAATCAGCTGCTTGAAAAAGCTAAGGACGAGGGTTATGATGTAAGCAAACTGCACAAGACACCACAGAGCGATCCTCCACCAGAAGATGAAGGCCCCAAAGATACCAAAGGCATATGGTGGATAAAGTCTCTTCTGGGAAAATAA
mRNA sequence
ATGGCGAAGAAAGAGATGGAAGTGGTGAAAGGTTTGGAGCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCATCAAGAAATCAGCCAAAGAATGGTGTGAACACAAGGGCTAATTATGCACTCAAAGAAGATGGAACTGTGAATGTGGTGAATGAAACTTGGAGTGATGGAAAGAGAAGTTCTATAGAAGGTGTGGCTTTCAAGGCTGAGCCTTCGAGCGAGGAGGCCAAGTTCAAGGTCAAATTCTATCTGCCACCTTTTCTTCCAATCATTCCAGTTGTTGGGAATTACTGGGTTTTGTATATTGATGATGATTATCAGTATGTCCTGATTGGAGAACCTTCAAGGAAGAATCTTTGGATCTTGTGCAGAGATACTCATCTTAACGAGGAGATATATAATCAGCTGCTTGAAAAAGCTAAGGACGAGGGTTATGATGTAAGCAAACTGCACAAGACACCACAGAGCGATCCTCCACCAGAAGATGAAGGCCCCAAAGATACCAAAGGCATATGGTGGATAAAGTCTCTTCTGGGAAAATAA
Coding sequence (CDS)
ATGGCGAAGAAAGAGATGGAAGTGGTGAAAGGTTTGGAGCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCATCAAGAAATCAGCCAAAGAATGGTGTGAACACAAGGGCTAATTATGCACTCAAAGAAGATGGAACTGTGAATGTGGTGAATGAAACTTGGAGTGATGGAAAGAGAAGTTCTATAGAAGGTGTGGCTTTCAAGGCTGAGCCTTCGAGCGAGGAGGCCAAGTTCAAGGTCAAATTCTATCTGCCACCTTTTCTTCCAATCATTCCAGTTGTTGGGAATTACTGGGTTTTGTATATTGATGATGATTATCAGTATGTCCTGATTGGAGAACCTTCAAGGAAGAATCTTTGGATCTTGTGCAGAGATACTCATCTTAACGAGGAGATATATAATCAGCTGCTTGAAAAAGCTAAGGACGAGGGTTATGATGTAAGCAAACTGCACAAGACACCACAGAGCGATCCTCCACCAGAAGATGAAGGCCCCAAAGATACCAAAGGCATATGGTGGATAAAGTCTCTTCTGGGAAAATAA
Protein sequence
MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSDGKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSRKNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKSLLGK
Homology
BLAST of Lag0033723 vs. NCBI nr
Match:
KAG7035667.1 (Two-component response regulator ORR23 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98
Identity = 176/184 (95.65%), Postives = 182/184 (98.91%), Query Frame = 0
Query: 1 MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
MAKKEMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD
Sbjct: 761 MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 820
Query: 61 GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
GKRSSIEGVA+KA+PSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYID DYQYVLIGEPSR
Sbjct: 821 GKRSSIEGVAYKADPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLIGEPSR 880
Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
KNLWILCR+THLNEEIYNQLL+KAK+EGYDVSKLHKT QSDPPPEDEGPKDTKGIWWIKS
Sbjct: 881 KNLWILCRNTHLNEEIYNQLLDKAKEEGYDVSKLHKTSQSDPPPEDEGPKDTKGIWWIKS 940
Query: 181 LLGK 185
LLGK
Sbjct: 941 LLGK 944
BLAST of Lag0033723 vs. NCBI nr
Match:
XP_023005977.1 (temperature-induced lipocalin-1 [Cucurbita maxima] >XP_023529982.1 temperature-induced lipocalin-1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 175/184 (95.11%), Postives = 182/184 (98.91%), Query Frame = 0
Query: 1 MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
MAKKEMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD
Sbjct: 1 MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
Query: 61 GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
GKRSSIEGVA+KA+PSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYID DYQYVL+GEPSR
Sbjct: 61 GKRSSIEGVAYKADPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120
Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
KNLWILCR+THLNEEIYNQLL+KAK+EGYDVSKLHKT QSDPPPEDEGPKDTKGIWWIKS
Sbjct: 121 KNLWILCRNTHLNEEIYNQLLDKAKEEGYDVSKLHKTSQSDPPPEDEGPKDTKGIWWIKS 180
Query: 181 LLGK 185
LLGK
Sbjct: 181 LLGK 184
BLAST of Lag0033723 vs. NCBI nr
Match:
KAG6587839.1 (Two-component response regulator ORR23, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 369.0 bits (946), Expect = 2.4e-98
Identity = 175/184 (95.11%), Postives = 182/184 (98.91%), Query Frame = 0
Query: 1 MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
MAKKEMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD
Sbjct: 722 MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 781
Query: 61 GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
GKRSSIEGVA+KA+PSSEEAKFKV+FYLPPFLPIIPVVGNYWVLYID DYQYVLIGEPSR
Sbjct: 782 GKRSSIEGVAYKADPSSEEAKFKVRFYLPPFLPIIPVVGNYWVLYIDGDYQYVLIGEPSR 841
Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
KNLWILCR+THLNEEIYNQLL+KAK+EGYDVSKLHKT QSDPPPEDEGPKDTKGIWWIKS
Sbjct: 842 KNLWILCRNTHLNEEIYNQLLDKAKEEGYDVSKLHKTSQSDPPPEDEGPKDTKGIWWIKS 901
Query: 181 LLGK 185
LLGK
Sbjct: 902 LLGK 905
BLAST of Lag0033723 vs. NCBI nr
Match:
XP_022932699.1 (temperature-induced lipocalin-1-like [Cucurbita moschata])
HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 173/184 (94.02%), Postives = 180/184 (97.83%), Query Frame = 0
Query: 1 MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
MAK EMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD
Sbjct: 1 MAKTEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
Query: 61 GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
GKRSSIEGVA+KA+PSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYID DYQYVL+GEPSR
Sbjct: 61 GKRSSIEGVAYKADPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120
Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
KNLWILCR+ HLNEEIYNQLL+KAK+EGYDVSKLHKT QSDPPPEDEGPKDTKGIWWIKS
Sbjct: 121 KNLWILCRNAHLNEEIYNQLLDKAKEEGYDVSKLHKTSQSDPPPEDEGPKDTKGIWWIKS 180
Query: 181 LLGK 185
LLGK
Sbjct: 181 LLGK 184
BLAST of Lag0033723 vs. NCBI nr
Match:
XP_022921840.1 (temperature-induced lipocalin-1-like [Cucurbita moschata])
HSP 1 Score: 357.8 bits (917), Expect = 5.5e-95
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 0
Query: 1 MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
MAKKEMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRA YALKEDGTV VVNETWSD
Sbjct: 1 MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYALKEDGTVKVVNETWSD 60
Query: 61 GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
GKRSSIEGVAFKAEPSS+EAKFKVKFYLPPFLPIIPVVGNYWVLYID DYQYVL+GEPSR
Sbjct: 61 GKRSSIEGVAFKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120
Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
KNLWILCR+THLNEEIYN+LLEKAK+ GYDV+KLHKTPQSDPPPE EGPKDTKGIWWIKS
Sbjct: 121 KNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKS 180
Query: 181 -LLGK 185
LLGK
Sbjct: 181 ILLGK 185
BLAST of Lag0033723 vs. ExPASy Swiss-Prot
Match:
Q9FGT8 (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1)
HSP 1 Score: 280.0 bits (715), Expect = 1.9e-74
Identity = 130/183 (71.04%), Postives = 152/183 (83.06%), Query Frame = 0
Query: 3 KKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSDGK 62
KKEMEVVKGL +E+YMGRWYEIAS PSR QPKNGV+TRA Y L DGT++V+NETWS+GK
Sbjct: 4 KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63
Query: 63 RSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSRKN 122
R IEG A+KA+P S+EAK KVKFY+PPFLPIIPV G+YWVLYID DYQ+ LIG+PSR
Sbjct: 64 RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123
Query: 123 LWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPE-DEGPKDTKGIWWIKSL 182
LWIL R + EE Y QL+EKA +EGYD+SKLHKTPQSD PPE + P+D+KG+WW KSL
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKSL 183
Query: 183 LGK 185
GK
Sbjct: 184 FGK 186
BLAST of Lag0033723 vs. ExPASy Swiss-Prot
Match:
Q5URA7 (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R877 PE=1 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 4.0e-16
Identity = 53/155 (34.19%), Postives = 84/155 (54.19%), Query Frame = 0
Query: 2 AKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSDG 61
+K+++ L++++YMG WYEIA +P+ Q K VN+ ANY L E + V N +G
Sbjct: 18 SKRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEING 77
Query: 62 KRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVG--NYWVLYIDDDYQYVLIGEPS 121
+ +S+ G A A + F P L + G Y V++ID++YQY ++
Sbjct: 78 RINSVTGTAIPA----ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGG 137
Query: 122 RKNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKL 155
LWIL R ++N+ YNQL+ ++GYDV+ L
Sbjct: 138 NDTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNL 166
BLAST of Lag0033723 vs. ExPASy Swiss-Prot
Match:
P0A902 (Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 2.9e-14
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 0
Query: 8 VVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD--GKRSS 67
VV + ++Y+G WYEIA R + + A Y+L++DG +NV+N+ ++ G
Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89
Query: 68 IEGVA-FKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSRKNLW 127
EG A F P+ A KV F+ P + G Y V+ +D +Y++ L+ P R LW
Sbjct: 90 SEGKAYFTGAPT--RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLW 149
Query: 128 ILCRDTHLNEEIYNQLLEKAKDEGYDVSK 154
IL R +++E+ ++L A EG+DVSK
Sbjct: 150 ILSRTPTISDEVKQEMLAVATREGFDVSK 168
BLAST of Lag0033723 vs. ExPASy Swiss-Prot
Match:
P0A901 (Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc PE=1 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 2.9e-14
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 0
Query: 8 VVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD--GKRSS 67
VV + ++Y+G WYEIA R + + A Y+L++DG +NV+N+ ++ G
Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89
Query: 68 IEGVA-FKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSRKNLW 127
EG A F P+ A KV F+ P + G Y V+ +D +Y++ L+ P R LW
Sbjct: 90 SEGKAYFTGAPT--RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLW 149
Query: 128 ILCRDTHLNEEIYNQLLEKAKDEGYDVSK 154
IL R +++E+ ++L A EG+DVSK
Sbjct: 150 ILSRTPTISDEVKQEMLAVATREGFDVSK 168
BLAST of Lag0033723 vs. ExPASy Swiss-Prot
Match:
P51909 (Apolipoprotein D OS=Cavia porcellus OX=10141 GN=APOD PE=2 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 5.4e-13
Identity = 58/164 (35.37%), Postives = 84/164 (51.22%), Query Frame = 0
Query: 8 VVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVN-ETWSDGKRSSI 67
V + +L KY+GRWYEI IP + N + +ANY+LKE+G V V+N E DG + I
Sbjct: 33 VQENFDLNKYLGRWYEIEKIPVSFEKGNCI--QANYSLKENGRVKVLNQELRPDGTVNQI 92
Query: 68 EGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR------ 127
EG A + +E AK VKF+ +P P YWVL D D Y L+ +
Sbjct: 93 EGEATHSN-ITEPAKLGVKFF--QLMPSAP----YWVLATDYD-NYALVYSCTNIIWLFH 152
Query: 128 -KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPP 164
++WIL R+ +L +E L + D+ K+ T Q++ P
Sbjct: 153 VDHIWILGRNRYLPQETVTYLKDILTSNNIDIEKMTLTDQANCP 186
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7035667.1 | 1.1e-98 | 95.65 | Two-component response regulator ORR23 [Cucurbita argyrosperma subsp. argyrosper... | [more] |
XP_023005977.1 | 1.4e-98 | 95.11 | temperature-induced lipocalin-1 [Cucurbita maxima] >XP_023529982.1 temperature-i... | [more] |
KAG6587839.1 | 2.4e-98 | 95.11 | Two-component response regulator ORR23, partial [Cucurbita argyrosperma subsp. s... | [more] |
XP_022932699.1 | 2.6e-97 | 94.02 | temperature-induced lipocalin-1-like [Cucurbita moschata] | [more] |
XP_022921840.1 | 5.5e-95 | 92.97 | temperature-induced lipocalin-1-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q9FGT8 | 1.9e-74 | 71.04 | Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1 | [more] |
Q5URA7 | 4.0e-16 | 34.19 | Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R8... | [more] |
P0A902 | 2.9e-14 | 34.23 | Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 ... | [more] |
P0A901 | 2.9e-14 | 34.23 | Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc ... | [more] |
P51909 | 5.4e-13 | 35.37 | Apolipoprotein D OS=Cavia porcellus OX=10141 GN=APOD PE=2 SV=1 | [more] |