Lag0033563 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033563
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Basic helix-loop-helix transcription factor
Location	chr3: 309364 .. 310407 (+)
RNA-Seq Expression	Lag0033563
Synteny	Lag0033563

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCATCTACGGAATTAGCACATATCCCCCACTTTCACATTCCACAACCTCAAACCCAAACTGTTAATACACCTGCTGCTGCTGATCATAACATTACCATCCCTTGCAACAGGAAGAATTGGCCCCATGCAAAATGCTACAACGTCCGTGCGAAGAAGCCCAAAACACAAAACCAAAACCATAAAGTTTCTCAACCAGCACCAGCACCAGGGTACATCCATGTTAGAGCAAGGAGGGGTCAGGCCACTGACAGTCACAGCCTTGCAGAAAGGGTATAATCATTTGCATTTCATTACCCCCACAATAACACAATCTTAAACTTAATTTCCTCTCTTACCTTACCTAATTACTAATTACTAATTTTCTCAAATGGGGTTTCAGATCAGAAGAGAGAAGATCAGCCAAAGGATGAAGGTTTTGCAAACGCTTGTTCCAGGCTGCCACAAGGTGCACCCTACCTAATTGCCTATTTCTATTTCTCTCTTCCACCAATACTTCCTTACCAAATATTAATTAATAACATTAATTACATATACATATATAGGTAACTGGGAAGGCCCTGATGCTCGATGAAATTATTAATTATGTTCAGTCCCTGCAAAATCAAGTTGAGGTACATAAATAAATAAAATTACCAGCTATTTATATATATATTTATATATTTATTTGTGTGGATTCATTGGATATACTTTTATAATGGAAATAATGGTTATTCTGTGTAGTTCCTATCGATGAAGCTTGCTTCTGTTAACCCCATCCTCTACGACTTTGGAATGGATAATCCAGAAGTATTCCTCGGTAGACCAGACTCAGAGTCAGAGGTGGTGCTATATAAACATACAATACATAACTTGTTCATTTTATTTTCTTTTTAATTTTTTTTGTTTTCATGGATATTGTCCATTTCATTGTTAGTTCAGATATTGAATGGCAATGGCATGGTGGCAAATAATTCAGAGCAAGTAGAATTGGCATATAATAATATGGCACATCCACAGCAGGCAGAATTGGCGTACACATTTCAGACCAACTGGACATGA

mRNA sequence

ATGTCTGCATCTACGGAATTAGCACATATCCCCCACTTTCACATTCCACAACCTCAAACCCAAACTGTTAATACACCTGCTGCTGCTGATCATAACATTACCATCCCTTGCAACAGGAAGAATTGGCCCCATGCAAAATGCTACAACGTCCGTGCGAAGAAGCCCAAAACACAAAACCAAAACCATAAAGTTTCTCAACCAGCACCAGCACCAGGGTACATCCATGTTAGAGCAAGGAGGGGTCAGGCCACTGACAGTCACAGCCTTGCAGAAAGGATCAGAAGAGAGAAGATCAGCCAAAGGATGAAGGTTTTGCAAACGCTTGTTCCAGGCTGCCACAAGGTAACTGGGAAGGCCCTGATGCTCGATGAAATTATTAATTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTATCGATGAAGCTTGCTTCTGTTAACCCCATCCTCTACGACTTTGGAATGGATAATCCAGAAGTATTCCTCGGTAGACCAGACTCAGAGTCAGAGATATTGAATGGCAATGGCATGGTGGCAAATAATTCAGAGCAAGTAGAATTGGCATATAATAATATGGCACATCCACAGCAGGCAGAATTGGCGTACACATTTCAGACCAACTGGACATGA

Coding sequence (CDS)

ATGTCTGCATCTACGGAATTAGCACATATCCCCCACTTTCACATTCCACAACCTCAAACCCAAACTGTTAATACACCTGCTGCTGCTGATCATAACATTACCATCCCTTGCAACAGGAAGAATTGGCCCCATGCAAAATGCTACAACGTCCGTGCGAAGAAGCCCAAAACACAAAACCAAAACCATAAAGTTTCTCAACCAGCACCAGCACCAGGGTACATCCATGTTAGAGCAAGGAGGGGTCAGGCCACTGACAGTCACAGCCTTGCAGAAAGGATCAGAAGAGAGAAGATCAGCCAAAGGATGAAGGTTTTGCAAACGCTTGTTCCAGGCTGCCACAAGGTAACTGGGAAGGCCCTGATGCTCGATGAAATTATTAATTATGTTCAGTCCCTGCAAAATCAAGTTGAGTTCCTATCGATGAAGCTTGCTTCTGTTAACCCCATCCTCTACGACTTTGGAATGGATAATCCAGAAGTATTCCTCGGTAGACCAGACTCAGAGTCAGAGATATTGAATGGCAATGGCATGGTGGCAAATAATTCAGAGCAAGTAGAATTGGCATATAATAATATGGCACATCCACAGCAGGCAGAATTGGCGTACACATTTCAGACCAACTGGACATGA

Protein sequence

MSASTELAHIPHFHIPQPQTQTVNTPAAADHNITIPCNRKNWPHAKCYNVRAKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFLGRPDSESEILNGNGMVANNSEQVELAYNNMAHPQQAELAYTFQTNWT

Homology

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BLAST of Lag0033563 vs. NCBI nr
Match: XP_038879024.1 (transcription factor bHLH137-like [Benincasa hispida])

HSP 1 Score: 201.4 bits (511), Expect = 7.4e-48
Identity = 120/215 (55.81%), Postives = 142/215 (66.05%), Query Frame = 0


Query: 6   ELAHIPHF-HIPQPQTQTVNT--------PAAADHNITIPCNRKNWP------------- 65
           E    PH+ H+  PQ Q+V T         A+++++I +P +    P             
Sbjct: 30  ETPQTPHYDHLLPPQIQSVYTNNTTTHSPNASSNYHINMPSSHSYPPSEDPTNESGNGGD 89

Query: 66  -HAKCY-------NVRAKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRR 125
             ++CY           KK K Q+ +H         GYIHVRARRGQATDSHSLAER+RR
Sbjct: 90  RKSRCYKRAKAGGGSGCKKLKPQHHHHHPPADDHHHGYIHVRARRGQATDSHSLAERLRR 149

Query: 126 EKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGM 185
           +KISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPI YDFG 
Sbjct: 150 QKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPIQYDFGT 209

Query: 186 DNPEVFLGRPDSESEILNGNGMVANNSEQVELAYN 191
           D P+VF+GRP   SEILN NG+ + + +Q ELAYN
Sbjct: 210 DCPQVFIGRP--ASEILNANGIASRSDQQAELAYN 242

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BLAST of Lag0033563 vs. NCBI nr
Match: XP_023516576.1 (transcription factor bHLH74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.1 bits (510), Expect = 9.7e-48
Identity = 118/199 (59.30%), Postives = 140/199 (70.35%), Query Frame = 0


Query: 2   SASTELAHIPHFHIPQPQTQTVNTPAAADHNITI----------PCNRKNWPHAKCYNVR 61
           S+  + AH  H H+P     T   P  + H+++              R+ +  AK    R
Sbjct: 45  SSVQQTAH--HHHLPPRILPTATNPLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR 104

Query: 62  AKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPG 121
            KK KTQ+      Q  P PGYIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPG
Sbjct: 105 -KKLKTQDH----PQVPPPPGYIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPG 164

Query: 122 CHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFLGRPDSESEI 181
           CHKVTGKALMLDEIINYVQSLQ+Q+E LSM+LASV+PI YDFGMDNPEVF+G P   +++
Sbjct: 165 CHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRYDFGMDNPEVFIGTP--VTQV 224

Query: 182 LNGNGMVANNSEQVELAYN 191
           LNG+GMV + SEQ ELAYN
Sbjct: 225 LNGSGMV-SRSEQAELAYN 233

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BLAST of Lag0033563 vs. NCBI nr
Match: XP_022987143.1 (transcription factor bHLH137-like [Cucurbita maxima])

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-47
Identity = 122/210 (58.10%), Postives = 143/210 (68.10%), Query Frame = 0


Query: 6   ELAHIPHF-HIPQPQTQTVNTPAAADH---------NITIPCNRKNWPHAKCYNV----- 65
           E   IPHF H+  PQ Q+ +    A H           T+P +    P  +  N      
Sbjct: 27  EAPQIPHFHHLLPPQIQSSSVQQTAHHLPPRILPTATNTLPSSHSLSPCKEDPNERGGDG 86

Query: 66  --RAKKP--------KTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQ 125
             RA KP        K + Q+H   Q +P PGYIHVRARRGQATD HSLAER+RR+KISQ
Sbjct: 87  KRRAYKPAKAGGGRKKLKTQDH--PQVSPPPGYIHVRARRGQATDRHSLAERVRRQKISQ 146

Query: 126 RMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEV 185
           RMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQ+Q+E LSM+LASV+PI YDFGMDNPEV
Sbjct: 147 RMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRYDFGMDNPEV 206

Query: 186 FLGRPDSESEILNGNGMVANNSEQVELAYN 191
           F+G P   +++LNG+GMV + SEQ ELAYN
Sbjct: 207 FIGTP--VTQVLNGSGMV-SRSEQAELAYN 231

[Close]

BLAST of Lag0033563 vs. NCBI nr
Match: KAG6589349.1 (Transcription factor basic helix-loop-helix 137, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.9 bits (507), Expect = 2.2e-47
Identity = 117/199 (58.79%), Postives = 141/199 (70.85%), Query Frame = 0


Query: 2   SASTELAHIPHFHIPQPQTQTVNTPAAADHNITI----------PCNRKNWPHAKCYNVR 61
           S++ + AH  H H+P     T      + H+++              R+ +  AK    R
Sbjct: 28  SSAQQTAH--HHHLPPRILPTATNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR 87

Query: 62  AKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPG 121
            KK KTQ+      Q +P PGYIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPG
Sbjct: 88  -KKLKTQDH----PQVSPPPGYIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPG 147

Query: 122 CHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFLGRPDSESEI 181
           CHKVTGKALMLDEIINYVQSLQ+Q+E LSM+LASV+PI YDFGMDNPEVF+G P   +++
Sbjct: 148 CHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRYDFGMDNPEVFIGTP--VTQV 207

Query: 182 LNGNGMVANNSEQVELAYN 191
           LNG+GMV + SEQ ELAYN
Sbjct: 208 LNGSGMV-SRSEQAELAYN 216

[Close]

BLAST of Lag0033563 vs. NCBI nr
Match: KAG7023036.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.9 bits (507), Expect = 2.2e-47
Identity = 117/199 (58.79%), Postives = 141/199 (70.85%), Query Frame = 0


Query: 2   SASTELAHIPHFHIPQPQTQTVNTPAAADHNITI----------PCNRKNWPHAKCYNVR 61
           S++ + AH  H H+P     T      + H+++              R+ +  AK    R
Sbjct: 28  SSAQQTAH--HHHLPPRILPTATNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR 87

Query: 62  AKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPG 121
            KK KTQ+      Q +P PGYIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPG
Sbjct: 88  -KKLKTQDH----PQVSPPPGYIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPG 147

Query: 122 CHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFLGRPDSESEI 181
           CHKVTGKALMLDEIINYVQSLQ+Q+E LSM+LASV+PI YDFGMDNPEVF+G P   +++
Sbjct: 148 CHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRYDFGMDNPEVFIGTP--VTQV 207

Query: 182 LNGNGMVANNSEQVELAYN 191
           LNG+GMV + SEQ ELAYN
Sbjct: 208 LNGSGMV-SRSEQTELAYN 216

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BLAST of Lag0033563 vs. ExPASy Swiss-Prot
Match: Q93W88 (Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.5e-35
Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 50  VRAKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLV 109
           V  +K K Q +    S+  P   YIHVRARRGQATDSHSLAER+RREKIS+RM+ LQ LV
Sbjct: 113 VEGRKSKKQKRG---SKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLV 172

Query: 110 PGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 157
           PGC KVTGKALMLDEIINYVQ+LQ QVEFLSMKL S++P++YDFG D
Sbjct: 173 PGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSD 216

[Close]

BLAST of Lag0033563 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 73/98 (74.49%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 59  NQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGK 118
           N+++    P P   YIHVRARRGQATDSHSLAER+RREKI +RMK+LQ LVPGC+KVTGK
Sbjct: 284 NKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGK 343

Query: 119 ALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 157
           ALMLDEIINYVQSLQ QVEFLSMKL+SVN    DF +D
Sbjct: 344 ALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381

[Close]

BLAST of Lag0033563 vs. ExPASy Swiss-Prot
Match: Q9CAA9 (Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33
Identity = 77/108 (71.30%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 49  NVRAKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTL 108
           N   KK  +  Q  K S   P  GYIHVRARRGQAT+SHSLAER+RREKIS+RMK LQ L
Sbjct: 276 NSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 335

Query: 109 VPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 157
           VPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP + DF ++
Sbjct: 336 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQM-DFNLE 382

[Close]

BLAST of Lag0033563 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-33
Identity = 87/163 (53.37%), Postives = 108/163 (66.26%), Query Frame = 0


Query: 56  KTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKV 115
           K++    K     P   YIHVRARRGQATDSHSLAER+RREKIS+RMK+LQ LVPGC+KV
Sbjct: 238 KSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 297

Query: 116 TGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD---NPEVF----------- 175
           TGKALMLDEIINYVQSLQ QVEFLSMKL+SVN  L DF MD   + ++F           
Sbjct: 298 TGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRL-DFNMDALLSKDIFPSSNNLMHHQQ 357

Query: 176 LGRPDSESEILNGNGMVANNSEQVELAYNNMAHPQQAELAYTF 205
           + + DS +E L G+    N     +++ NN+ +P +     +F
Sbjct: 358 VLQLDSSAETLLGDHHNKNLQLNPDISSNNVINPLETSETRSF 399

[Close]

BLAST of Lag0033563 vs. ExPASy Swiss-Prot
Match: Q6NKN9 (Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.9e-32
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 56  KTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKV 115
           +T N+    S+ AP   YIH+RARRGQAT+SHSLAER+RREKIS+RM++LQ LVPGC+K+
Sbjct: 186 ETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 245

Query: 116 TGKALMLDEIINYVQSLQNQVEFLSMKLASVNP 149
           TGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP
Sbjct: 246 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 278

[Close]

BLAST of Lag0033563 vs. ExPASy TrEMBL
Match: A0A6J1JIL6 (transcription factor bHLH137-like OS=Cucurbita maxima OX=3661 GN=LOC111484783 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 8.0e-48
Identity = 122/210 (58.10%), Postives = 143/210 (68.10%), Query Frame = 0


Query: 6   ELAHIPHF-HIPQPQTQTVNTPAAADH---------NITIPCNRKNWPHAKCYNV----- 65
           E   IPHF H+  PQ Q+ +    A H           T+P +    P  +  N      
Sbjct: 27  EAPQIPHFHHLLPPQIQSSSVQQTAHHLPPRILPTATNTLPSSHSLSPCKEDPNERGGDG 86

Query: 66  --RAKKP--------KTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQ 125
             RA KP        K + Q+H   Q +P PGYIHVRARRGQATD HSLAER+RR+KISQ
Sbjct: 87  KRRAYKPAKAGGGRKKLKTQDH--PQVSPPPGYIHVRARRGQATDRHSLAERVRRQKISQ 146

Query: 126 RMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEV 185
           RMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQ+Q+E LSM+LASV+PI YDFGMDNPEV
Sbjct: 147 RMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRYDFGMDNPEV 206

Query: 186 FLGRPDSESEILNGNGMVANNSEQVELAYN 191
           F+G P   +++LNG+GMV + SEQ ELAYN
Sbjct: 207 FIGTP--VTQVLNGSGMV-SRSEQAELAYN 231

[Close]

BLAST of Lag0033563 vs. ExPASy TrEMBL
Match: A0A6J1E106 (transcription factor bHLH74-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429828 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.0e-47
Identity = 117/199 (58.79%), Postives = 141/199 (70.85%), Query Frame = 0


Query: 2   SASTELAHIPHFHIPQPQTQTVNTPAAADHNITI----------PCNRKNWPHAKCYNVR 61
           S++ + AH  H H+P     T      + H+++              R+ +  AK    R
Sbjct: 57  SSAQQTAH--HHHLPPRILPTTTNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR 116

Query: 62  AKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPG 121
            KK KTQ+      Q +P PGYIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPG
Sbjct: 117 -KKLKTQDH----PQVSPPPGYIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPG 176

Query: 122 CHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFLGRPDSESEI 181
           CHKVTGKALMLDEIINYVQSLQ+Q+E LSM+LASV+PI YDFGMDNPEVF+G P   +++
Sbjct: 177 CHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRYDFGMDNPEVFIGTP--VTQV 236

Query: 182 LNGNGMVANNSEQVELAYN 191
           LNG+GMV + SEQ ELAYN
Sbjct: 237 LNGSGMV-SRSEQAELAYN 245

[Close]

BLAST of Lag0033563 vs. ExPASy TrEMBL
Match: A0A6J1E6B0 (transcription factor bHLH137-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429828 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.0e-47
Identity = 117/199 (58.79%), Postives = 141/199 (70.85%), Query Frame = 0


Query: 2   SASTELAHIPHFHIPQPQTQTVNTPAAADHNITI----------PCNRKNWPHAKCYNVR 61
           S++ + AH  H H+P     T      + H+++              R+ +  AK    R
Sbjct: 45  SSAQQTAH--HHHLPPRILPTTTNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGR 104

Query: 62  AKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPG 121
            KK KTQ+      Q +P PGYIHVRARRGQATD HSLAER+RR+KISQRMKVLQTLVPG
Sbjct: 105 -KKLKTQDH----PQVSPPPGYIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPG 164

Query: 122 CHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFLGRPDSESEI 181
           CHKVTGKALMLDEIINYVQSLQ+Q+E LSM+LASV+PI YDFGMDNPEVF+G P   +++
Sbjct: 165 CHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRYDFGMDNPEVFIGTP--VTQV 224

Query: 182 LNGNGMVANNSEQVELAYN 191
           LNG+GMV + SEQ ELAYN
Sbjct: 225 LNGSGMV-SRSEQAELAYN 233

[Close]

BLAST of Lag0033563 vs. ExPASy TrEMBL
Match: A0A5A7URF9 (Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00190 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 8.9e-47
Identity = 118/192 (61.46%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 19  QTQTVNTPAAADHNITIPCNRKNWPHA----------------KCYNVRAKKPKTQNQNH 78
           QT   + P   DH+I +P +  + P A                +CYN RAK  +      
Sbjct: 44  QTPQHHHPLGPDHHIYMPSSHSHPPSAEEEDQNGSKGGECKRRRCYN-RAKAGERSGCKK 103

Query: 79  KVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALML 138
           K++         HVRARRGQATDSHSLAER+RR+KISQRMKVLQTLVPGCHKVTGKA ML
Sbjct: 104 KMTIKTQHDPADHVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKASML 163

Query: 139 DEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFL-GRPDSESEILNGNGMVANN 194
           DEIINYVQSLQNQVEFLSMKLAS++P+LYDFGMD PEV + G P   SEILNGNGMV ++
Sbjct: 164 DEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMDFPEVLIVGTP--ASEILNGNGMV-SH 223

[Close]

BLAST of Lag0033563 vs. ExPASy TrEMBL
Match: A0A5D3BH45 (Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00220 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 3.4e-46
Identity = 117/192 (60.94%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 19  QTQTVNTPAAADHNITIPCNRKNWPHA----------------KCYNVRAKKPKTQNQNH 78
           QT   + P   DH+I +P +  + P A                +CYN RAK  +      
Sbjct: 44  QTPQHHHPLGPDHHIYMPSSHSHPPSAEEEDQNGSKGGECKRRRCYN-RAKAGERSGCKK 103

Query: 79  KVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGKALML 138
           K++         HVRARRGQATDSHSLAER+RR+KISQRMKVLQTLVPGCHKVTGKA ML
Sbjct: 104 KMTIKTQHDPADHVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKASML 163

Query: 139 DEIINYVQSLQNQVEFLSMKLASVNPILYDFGMDNPEVFL-GRPDSESEILNGNGMVANN 194
           DEIINYVQSLQNQVEFLSMKLAS++P+LYDFGMD PEV + G P   SEILNGNGMV ++
Sbjct: 164 DEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMDFPEVLIVGTP--ASEILNGNGMV-SH 223

[Close]

BLAST of Lag0033563 vs. TAIR 10
Match: AT5G50915.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-36
Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 50  VRAKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLV 109
           V  +K K Q +    S+  P   YIHVRARRGQATDSHSLAER+RREKIS+RM+ LQ LV
Sbjct: 113 VEGRKSKKQKRG---SKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLV 172

Query: 110 PGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 157
           PGC KVTGKALMLDEIINYVQ+LQ QVEFLSMKL S++P++YDFG D
Sbjct: 173 PGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSD 216

[Close]

BLAST of Lag0033563 vs. TAIR 10
Match: AT5G50915.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-36
Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 50  VRAKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLV 109
           V  +K K Q +    S+  P   YIHVRARRGQATDSHSLAER+RREKIS+RM+ LQ LV
Sbjct: 113 VEGRKSKKQKRG---SKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLV 172

Query: 110 PGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 157
           PGC KVTGKALMLDEIINYVQ+LQ QVEFLSMKL S++P++YDFG D
Sbjct: 173 PGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSD 216

[Close]

BLAST of Lag0033563 vs. TAIR 10
Match: AT5G48560.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 7.7e-35
Identity = 73/98 (74.49%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 59  NQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTLVPGCHKVTGK 118
           N+++    P P   YIHVRARRGQATDSHSLAER+RREKI +RMK+LQ LVPGC+KVTGK
Sbjct: 284 NKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGK 343

Query: 119 ALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 157
           ALMLDEIINYVQSLQ QVEFLSMKL+SVN    DF +D
Sbjct: 344 ALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381

[Close]

BLAST of Lag0033563 vs. TAIR 10
Match: AT1G68920.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-34
Identity = 77/108 (71.30%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 49  NVRAKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTL 108
           N   KK  +  Q  K S   P  GYIHVRARRGQAT+SHSLAER+RREKIS+RMK LQ L
Sbjct: 276 NSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 335

Query: 109 VPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 157
           VPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP + DF ++
Sbjct: 336 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQM-DFNLE 382

[Close]

BLAST of Lag0033563 vs. TAIR 10
Match: AT1G68920.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-34
Identity = 77/108 (71.30%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 49  NVRAKKPKTQNQNHKVSQPAPAPGYIHVRARRGQATDSHSLAERIRREKISQRMKVLQTL 108
           N   KK  +  Q  K S   P  GYIHVRARRGQAT+SHSLAER+RREKIS+RMK LQ L
Sbjct: 276 NSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 335

Query: 109 VPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPILYDFGMD 157
           VPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP + DF ++
Sbjct: 336 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQM-DFNLE 382

The following BLAST results are available for this feature:

BLAST of Lag0033563 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879024.1	7.4e-48	55.81	transcription factor bHLH137-like [Benincasa hispida]	[more]
XP_023516576.1	9.7e-48	59.30	transcription factor bHLH74-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987143.1	1.7e-47	58.10	transcription factor bHLH137-like [Cucurbita maxima]	[more]
KAG6589349.1	2.2e-47	58.79	Transcription factor basic helix-loop-helix 137, partial [Cucurbita argyrosperma...	[more]
KAG7023036.1	2.2e-47	58.79	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lag0033563 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93W88	7.5e-35	71.03	Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=...	[more]
Q9FJL4	1.1e-33	74.49	Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1	[more]
Q9CAA9	1.4e-33	71.30	Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1	[more]
Q9SRT2	2.4e-33	53.37	Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1	[more]
Q6NKN9	5.9e-32	74.19	Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1	[more]

BLAST of Lag0033563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JIL6	8.0e-48	58.10	transcription factor bHLH137-like OS=Cucurbita maxima OX=3661 GN=LOC111484783 PE...	[more]
A0A6J1E106	1.0e-47	58.79	transcription factor bHLH74-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1E6B0	1.0e-47	58.79	transcription factor bHLH137-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5A7URF9	8.9e-47	61.46	Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5D3BH45	3.4e-46	60.94	Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Lag0033563 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50915.1	5.3e-36	71.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G50915.2	5.3e-36	71.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G48560.1	7.7e-35	74.49	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.1	1.0e-34	71.30	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.2	1.0e-34	71.30	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 88..138 e-value: 3.6E-10 score: 49.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 86..133 e-value: 4.0E-7 score: 29.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 82..132 score: 15.446584
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 79..150 e-value: 4.5E-14 score: 54.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 80..148
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 51..196
None	No IPR available	PANTHER	PTHR12565:SF327	BHLH-TRANSCRIPTION FACTOR	coord: 51..196
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 72..156 e-value: 2.18384E-59 score: 179.175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033563.1	Lag0033563.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity