Lag0032996 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032996
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	FLZ-type domain-containing protein
Location	chr11: 39727020 .. 39727874 (-)
RNA-Seq Expression	Lag0032996
Synteny	Lag0032996

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAATTCTTCTGCGAGAAGGCCGTATTTCATCGACGAAGACGATGGGTTGGTCTCTTTGGTGGACGTGGATGCTGGAGTTTCTGGAAACCAGCACGGCCACTATCCTCAGTCTTTCTTCCCCCGGCCCAAGATTTGCCACAGCGGCGCTCTCCGGCGCGGCGGTTCGCGAAGCCTCTCGGTTTCCTCTAATTCGAGAGTTTCTGCGAGGTTTTACGACGTGAGATTTGAAGATCACCATCACCATTTCTTGGATGCTTGTTTCCTCTGCAAGAAGCCGCTCGGTGATGACAAAGACATTTTCATGTACAGGTTAGTGTTTGTGGAAATCTGGATTTGTGGATTTTGCTTTTTTGTTTAAGAAGACGTCTGGTGATTGGTTTGGATTTGTAGTTTGTTCGACATTTTGTGTTGTAATTATCGGGAGCGAGGTTGAATCGGAAAATCCGATCGAGAGAGAAATTAGATTGTTAGAAACCTAATGCAAATAGGATCGATCTTTTAATTCCTTACGGTATTTGACGAACAAAATATAATCTCGAGATCTAGAAACGAGAATCAGATCTTAAATATGATGAACGTTCAATTACGAAGAATAACAAAGAAATAAACGCTTGGCTATGATTCTGACGATGTTGTTACGATTATCTTCTGCAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGACAAAAGCAAATCGAAATGGACGAAGCGAAAGAGAAGAAGATGAATCTATCATCGTCCATCAAAGCCATGAGAAAAAAAGATCAGAGAAAATCCACTTCTCCGGGCAAGTCCACCACCGACCACGACTGCCGTTTCCGCTCCGGCACGGTGGCGGCGGCGTAA

mRNA sequence

ATGGATAATTCTTCTGCGAGAAGGCCGTATTTCATCGACGAAGACGATGGGTTGGTCTCTTTGGTGGACGTGGATGCTGGAGTTTCTGGAAACCAGCACGGCCACTATCCTCAGTCTTTCTTCCCCCGGCCCAAGATTTGCCACAGCGGCGCTCTCCGGCGCGGCGGTTCGCGAAGCCTCTCGGTTTCCTCTAATTCGAGAGTTTCTGCGAGGTTTTACGACGTGAGATTTGAAGATCACCATCACCATTTCTTGGATGCTTGTTTCCTCTGCAAGAAGCCGCTCGGTGATGACAAAGACATTTTCATGTACAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGACAAAAGCAAATCGAAATGGACGAAGCGAAAGAGAAGAAGATGAATCTATCATCGTCCATCAAAGCCATGAGAAAAAAAGATCAGAGAAAATCCACTTCTCCGGGCAAGTCCACCACCGACCACGACTGCCGTTTCCGCTCCGGCACGGTGGCGGCGGCGTAA

Coding sequence (CDS)

ATGGATAATTCTTCTGCGAGAAGGCCGTATTTCATCGACGAAGACGATGGGTTGGTCTCTTTGGTGGACGTGGATGCTGGAGTTTCTGGAAACCAGCACGGCCACTATCCTCAGTCTTTCTTCCCCCGGCCCAAGATTTGCCACAGCGGCGCTCTCCGGCGCGGCGGTTCGCGAAGCCTCTCGGTTTCCTCTAATTCGAGAGTTTCTGCGAGGTTTTACGACGTGAGATTTGAAGATCACCATCACCATTTCTTGGATGCTTGTTTCCTCTGCAAGAAGCCGCTCGGTGATGACAAAGACATTTTCATGTACAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGACAAAAGCAAATCGAAATGGACGAAGCGAAAGAGAAGAAGATGAATCTATCATCGTCCATCAAAGCCATGAGAAAAAAAGATCAGAGAAAATCCACTTCTCCGGGCAAGTCCACCACCGACCACGACTGCCGTTTCCGCTCCGGCACGGTGGCGGCGGCGTAA

Protein sequence

MDNSSARRPYFIDEDDGLVSLVDVDAGVSGNQHGHYPQSFFPRPKICHSGALRRGGSRSLSVSSNSRVSARFYDVRFEDHHHHFLDACFLCKKPLGDDKDIFMYRGDTPFCSEECRQKQIEMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTTDHDCRFRSGTVAAA

Homology

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BLAST of Lag0032996 vs. NCBI nr
Match: XP_022973263.1 (uncharacterized protein LOC111471819 [Cucurbita maxima] >XP_023541050.1 uncharacterized protein LOC111801327 [Cucurbita pepo subsp. pepo] >KAG6571751.1 FCS-Like Zinc finger 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.0 bits (728), Expect = 4.1e-73
Identity = 142/170 (83.53%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MDNS-SARRPYFIDEDDGLVSLVDVDAGVSGNQHGHYPQSFFPRPKICHSGALRRGGSRS 60
           MD+S +ARRPYFIDEDDGLVSLVDV+AG+SGNQ+ HYPQ FF RP+ICH G  RR G+R+
Sbjct: 1   MDSSVAARRPYFIDEDDGLVSLVDVEAGISGNQNSHYPQPFFHRPRICHGGTHRR-GTRN 60

Query: 61  LSVSSNSRVSARFYDVRFEDHHHHFLDACFLCKKPLGDDKDIFMYRGDTPFCSEECRQKQ 120
           LSVSS SRVSARFYD RFE HHHHFL+ACFLCKKPL D+KDIFMYRGDTPFCSEECR+KQ
Sbjct: 61  LSVSS-SRVSARFYDARFEHHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECREKQ 120

Query: 121 IEMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTTDHDCRFRSGTVAAA 170
           I+MDEAKEKK+NLSSSIKAMRKKDQRKSTSPGKSTT HDCRFR+GTV AA
Sbjct: 121 IDMDEAKEKKLNLSSSIKAMRKKDQRKSTSPGKSTTGHDCRFRAGTVLAA 168

[Close]

BLAST of Lag0032996 vs. NCBI nr
Match: KAG7033613.1 (hypothetical protein SDJN02_03337, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.0 bits (728), Expect = 4.1e-73
Identity = 142/170 (83.53%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MDNS-SARRPYFIDEDDGLVSLVDVDAGVSGNQHGHYPQSFFPRPKICHSGALRRGGSRS 60
           MD+S +ARRPYFIDEDDGLVSLVDV+AG+SGNQ+ HYPQ FF RP+ICH G  RR G+R+
Sbjct: 40  MDSSVAARRPYFIDEDDGLVSLVDVEAGISGNQNSHYPQPFFHRPRICHGGTHRR-GTRN 99

Query: 61  LSVSSNSRVSARFYDVRFEDHHHHFLDACFLCKKPLGDDKDIFMYRGDTPFCSEECRQKQ 120
           LSVSS SRVSARFYD RFE HHHHFL+ACFLCKKPL D+KDIFMYRGDTPFCSEECR+KQ
Sbjct: 100 LSVSS-SRVSARFYDARFEHHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECREKQ 159

Query: 121 IEMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTTDHDCRFRSGTVAAA 170
           I+MDEAKEKK+NLSSSIKAMRKKDQRKSTSPGKSTT HDCRFR+GTV AA
Sbjct: 160 IDMDEAKEKKLNLSSSIKAMRKKDQRKSTSPGKSTTGHDCRFRAGTVLAA 207

[Close]

BLAST of Lag0032996 vs. NCBI nr
Match: XP_022932984.1 (uncharacterized protein LOC111439605 [Cucurbita moschata])

HSP 1 Score: 284.3 bits (726), Expect = 7.0e-73
Identity = 142/170 (83.53%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MDNS-SARRPYFIDEDDGLVSLVDVDAGVSGNQHGHYPQSFFPRPKICHSGALRRGGSRS 60
           MD+S +ARRPYFIDEDDGLVSLVDV+AG+SGNQ  HYPQ FF RP+ICH G  RR G+R+
Sbjct: 1   MDSSVAARRPYFIDEDDGLVSLVDVEAGISGNQSSHYPQPFFHRPRICHGGTHRR-GTRN 60

Query: 61  LSVSSNSRVSARFYDVRFEDHHHHFLDACFLCKKPLGDDKDIFMYRGDTPFCSEECRQKQ 120
           LSVSS SRVSARFYD RFE HHHHFL+ACFLCKKPL D+KDIFMYRGDTPFCSEECR+KQ
Sbjct: 61  LSVSS-SRVSARFYDARFEHHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECREKQ 120

Query: 121 IEMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTTDHDCRFRSGTVAAA 170
           I+MDEAKEKK+NLSSSIKAMRKKDQRKSTSPGKSTT HDCRFR+GTV AA
Sbjct: 121 IDMDEAKEKKLNLSSSIKAMRKKDQRKSTSPGKSTTGHDCRFRAGTVLAA 168

[Close]

BLAST of Lag0032996 vs. NCBI nr
Match: XP_022155890.1 (uncharacterized protein LOC111022896 [Momordica charantia])

HSP 1 Score: 269.2 bits (687), Expect = 2.3e-68
Identity = 137/169 (81.07%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 3   NSSARRPYFIDEDDGLVSLVDVDAGVSGNQHGHYP-QSFFPRPKICHSGALRRGG-SRSL 62
           +++ARRPYFID+DDGLVSLVDV+AG SG+QHGHYP QSFF RPK  H GA RRG   R+L
Sbjct: 5   SATARRPYFIDKDDGLVSLVDVEAGFSGSQHGHYPAQSFFLRPKPSHGGAHRRGAPPRNL 64

Query: 63  SVSSNSRVSARFYDVRFEDHHHHFLDACFLCKKPLGDDKDIFMYRGDTPFCSEECRQKQI 122
           SVSS  R SARFYD RFEDH+HHFL+ACFLCKKPLGD+KDIFMYRGDTPFCSEECR KQI
Sbjct: 65  SVSS-PRFSARFYDARFEDHYHHFLEACFLCKKPLGDNKDIFMYRGDTPFCSEECRHKQI 124

Query: 123 EMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTTDHDCRFRSGTVAAA 170
           E DEAKEKK+NLSSSIKAMRKKDQRKS SPGKST  HDCRFR+ TVAAA
Sbjct: 125 ETDEAKEKKLNLSSSIKAMRKKDQRKSASPGKSTATHDCRFRTSTVAAA 172

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BLAST of Lag0032996 vs. NCBI nr
Match: XP_011652677.2 (FCS-Like Zinc finger 2 [Cucumis sativus] >KAE8651463.1 hypothetical protein Csa_000756 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 5.2e-68
Identity = 136/175 (77.71%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MDNS-SARRPYFIDEDDGLVSLVDVDAGVSGNQH----GHYPQSFFPRPK-ICHSGALRR 60
           MD+S +ARRPYFIDEDDGLVSLVDV+AG+SGN H     HYP  F  RPK IC  G  +R
Sbjct: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHHNNNNNHYPHPFILRPKIICTHGGAQR 60

Query: 61  GGSRSLSVSSNSRVSARFYDVRFEDHHHHFLDACFLCKKPLGDDKDIFMYRGDTPFCSEE 120
             +R+LS SS+  +S RFYD RFEDHHHHFL ACFLCKKPL D+KDIFMYRGDTPFCSEE
Sbjct: 61  RTTRNLSFSSSRIISPRFYDARFEDHHHHFLKACFLCKKPLSDNKDIFMYRGDTPFCSEE 120

Query: 121 CRQKQIEMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTTDHDCRFRSGTVAAA 170
           CRQ+QI+MDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKST DHDCRFR GTVAAA
Sbjct: 121 CRQRQIDMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTADHDCRFRPGTVAAA 175

[Close]

BLAST of Lag0032996 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 89/171 (52.05%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 5   SARRPYFI-DEDDGLVSLVDVDAGVSGNQHGHYPQSFFPRPKICHSGALRRGGSRSLSVS 64
           S R+PYFI +EDDG VSL +++AGVS     +YPQS++                   SVS
Sbjct: 4   SMRKPYFIEEEDDGFVSLSEMEAGVSSPSCYNYPQSYY-----------YNHHHHQYSVS 63

Query: 65  SNSRVSARFYDVRFEDHHH-----HFLDACFLCKKPLGDDKDIFMYRGDTPFCSEECRQK 124
           S    S +F+D RF++ ++     HFLD+CFLCKK LGD++DIFMYRGDTPFCSEECR++
Sbjct: 64  SPR--SGKFHDFRFDNSYYGYGQPHFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREE 123

Query: 125 QIEMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTTDHDCRFRSGTVAAA 170
           QIE DEAKEKK +LS+S+KAMR+ ++R S+S    T   +  FR+GTVAAA
Sbjct: 124 QIERDEAKEKKQSLSTSVKAMRRNEKRSSSS--SPTRSRNYAFRTGTVAAA 159

[Close]

BLAST of Lag0032996 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.6e-35
Identity = 93/180 (51.67%), Postives = 117/180 (65.00%), Query Frame = 0


Query: 5   SARRPYFIDEDDG---LVSLVDVDAGVSG-----NQHGHYPQSFFPRPKICHS--GALRR 64
           S+R+PYFI+E++      SL +++AG SG     N HG+         +  +    +LR 
Sbjct: 4   SSRKPYFIEEEEEENLASSLSEMEAGFSGNNNNSNNHGNPQNGVVSSSRFSYGRLNSLRN 63

Query: 65  GGS---RSLSVSS-NSRVSARFYDVRFEDHHHHFLDACFLCKKPLGDDKDIFMYRGDTPF 124
             S      SVSS  S VS RF+D RF+    HFLD+CFLCKKPLGD++DI+MYRGDTPF
Sbjct: 64  SQSYYYNQYSVSSPRSVVSGRFHDFRFDIQQPHFLDSCFLCKKPLGDNRDIYMYRGDTPF 123

Query: 125 CSEECRQKQIEMDEAKEKKMNLSSSIK-AMRKKDQRKSTSPGKSTTDHDCRFRSGTVAAA 170
           CSEECRQ+QIE DEAKEKK NLS S+K AMR+K+Q   +SP   T   D  F +GTVAAA
Sbjct: 124 CSEECRQEQIERDEAKEKKQNLSHSVKSAMRRKEQ---SSP---TRSRDYAFHNGTVAAA 177

[Close]

BLAST of Lag0032996 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 83  HFLDACFLCKKPLGDDKDIFMYRGDTPFCSEECRQKQIEMDEAKEKKMNLSSSIKAMRKK 142
           HFL++C LC+K LG + DIFMYRGD  FCS ECR++QIE DEAKE+K   SS  +++RK 
Sbjct: 15  HFLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESDEAKERKWKKSS--RSLRKN 74

Query: 143 DQRKSTSPGKSTTDHDCRFRSGTVAAA 170
                 S   +T       R+GT+  A
Sbjct: 75  SSETKESAAGNTV------RTGTLVVA 93

[Close]

BLAST of Lag0032996 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-09
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 79  DHHHHFLDACFLCKKPLGDDKDIFMYRGDTPFCSEECRQKQIEMDEAKEKK 130
           D+   FL +C LCK+ L   +DI+MYRGD  FCS ECRQ+QI +DE KEKK
Sbjct: 73  DYSEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERKEKK 123

[Close]

BLAST of Lag0032996 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.7e-09
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0


Query: 83  HFLDACFLCKKPLGDDKDIFMYRGDTPFCSEECRQKQIEMDEAKEK 129
           HFL +C LC++ L   +DI+MYRGD  FCS ECRQ+Q+  DE KEK
Sbjct: 88  HFLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQDERKEK 133

The following BLAST results are available for this feature:

BLAST of Lag0032996 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973263.1	4.1e-73	83.53	uncharacterized protein LOC111471819 [Cucurbita maxima] >XP_023541050.1 uncharac...	[more]
KAG7033613.1	4.1e-73	83.53	hypothetical protein SDJN02_03337, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022932984.1	7.0e-73	83.53	uncharacterized protein LOC111439605 [Cucurbita moschata]	[more]
XP_022155890.1	2.3e-68	81.07	uncharacterized protein LOC111022896 [Momordica charantia]	[more]
XP_011652677.2	5.2e-68	77.71	FCS-Like Zinc finger 2 [Cucumis sativus] >KAE8651463.1 hypothetical protein Csa_...	[more]

BLAST of Lag0032996 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZM9	1.1e-36	52.05	FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1	[more]
Q9FGQ9	4.6e-35	51.67	FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1	[more]
O80506	1.5e-12	48.28	FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1	[more]
Q8VY80	2.0e-09	58.82	FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1	[more]
Q9SGZ8	5.7e-09	58.70	FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..159
None	No IPR available	PANTHER	PTHR46057:SF39	SUBFAMILY NOT NAMED	coord: 57..169
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 77..126 e-value: 6.0E-26 score: 89.7
IPR007650	Zf-FLZ domain	PROSITE	PS51795	ZF_FLZ	coord: 83..127 score: 27.919851
IPR044533	FCS-Like Zinc finger 1/2/3	PANTHER	PTHR46057	FCS-LIKE ZINC FINGER 1-RELATED	coord: 57..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032996.1	Lag0032996.1	mRNA