Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCTTATCGACAAGTTTCTTATATCCGATGGAATCATAACCAAATTCACAAATGCCACTGCTCGCCGACTGGACAGAAACTCCTCTGATCATTTCCCTATCAGCCTCAATTTGGGGAAAGAGAAATGGGGACCAGCCCCTTTTAGGCTCAACATCGCTTGGGTTAATCATAGCTCCTTTCTCAATACAGTGGATTCTTGGTGGAAAAACACTCCCTCCATGGGCTGGCCAGGACATGGGTTCATACAAAAATTGAAAGGCCTCAAGAAGGAGCTTAAGCAATGGAATCACTCTGTTTTCGGTCAGTCTAAAGAGAAAAAATCCTGCCTGAGCAGAGAGCTTTCTTCCTTAGAACATAGGGAGGAGCTTGGTCAGCTTACCGCAGATGATATCAATAGAAGAATTGAGATAAAGGCTGCTCTTATCTCTATCTCGGCCAATGAGGAGATCTTGTGGCGACAGCAATGCAAGCTGAAATGGCTTAAAGAAGGTGATGTTAACACAACCTTCTTTCACCGTATTATGGCAACTCACAGAAGAAAAAGCTCTATATCCGAAATTATTTCTGCATCTGGGAATAGCCTTACCAACGACGAAGAGATTCGTTGAACACTCCCTTGATGTCATCTTTGAGAATGTTCCAAGATTTTTTAAAGAATTCCGCTGTGTAACCATCGGGGCCCGGGGTCTTGTTGGTGCCTAGGTCATTCACTGCCTTATAAATCTCCTGTTCTGTGAAGGGGCCCTCTAACAAATCTCTTTGTTCATCTGATATGGGGTTCCAGTCATCAATCCTGTGAAGAAAAAGCAACAAAAGATTTAGAAAGAGTGCAGCAGGAAGAAGCCTTTAAGCAAGTTGATTCCAGACGAGCTAAAGAATGTCACGCTTTATCTTCAAAAACCCTCTGATTTCTTTCCATCCAAATTGTTGATATCAAAGCTTTAACACCATTAAACCATAATAATCTCGGTCTTGAAGAAAAAGAAGGACCAATAAGCAGTTGAAGAAAAAGGGGGTAGACACACTCTTATCCAAGCCACCCTCACTAACCTTCCTGTTTACTATCTCTCATTATTTCAAGCTCCAAAGAAGGTCACCAAGGCCATTGAGAAGTTATACCACAGGTTCCTATGGAGTGGCAGTTCCGAGAAGAAAGGCTACCACCTTTTGAGGTGGTCTCATATTCAACTGCCTATGGAAGAGGGAGGTCGGGGCATTTTTGATATTCACAAGAAGAACATTTCTCTATTAGCTAAATGGTCTTGGAGATTCTATCGCGAGCCGAAAGCCCTTTGGAGGAAAATTATCACTACTAAATTTGGCCTTGCTTGTAACCCCCACAAACTGGGAGAACAATCCATGAACACCTCTAAGGGACCATGGAGGAATTTTTCAAGAATCGGCATCTCATATATAACTTCATTGATATTAGAGTTGGAAAGGGCGACAAGACCCTATTTTGGGAGGATGTTTGGCTGGGCGCATCTCCCTTGAAACACTCGTACCCATCTCTATTCAACCTATCGCTCAAGAAAAGGCCAGCATTGCCAATTTATGGAGCACAAATGAGGGGACCTGGAATCTCTTTTTAAGAAGGAATTTACTTGAATCTGAAATCCTAGAATGGGCCATGTTATCTCACCACCTCTCATCTTTCTCCCTCTCTAATAGGGATGATGCTTGGACTTGGCAGCTTGAAAGTGATGGTTTGTTCTCCACTGGGTCGCTCACTAAAAATTGGCTTCCTCATCGTAAGTGGTTGAAAAATCTTTCTATGGGCAATTATGGAAAGGAGCTATGCCGAAAAAAGTTAAATTCTTCATTTGGGAGCTTAGCCACGCATGTATCAACACTGCCACATAATTCAAAGAAGAAATCCAGCCTCCTATCTTTCCCCTAGCTGCTGCAGCATGTGCTATGGGCGAGCGAATCACAAATTCATCTCTACAGCGGATGTGTCTTTGCCACAGCTTTTTGGGACCATGTTCAAGGCGCTTTTGGATGGCACTTTGCTAGACCAGGGAACATCCAAACTCTTCATCATTATTCTCTTCTTGGTCACCCCTTCAAAAACGACACTAAGATTCTTTGGCGGAACTTTTTGTATGCATTCTTCTGGAACTTGTGGTTAGAGAGAAATGCTAGAATCTTCAATAATAAGCAGCAGAATATTTATGCTTTCATCGAATCCACATCATACCTTGCTATGTATTGGAGCAGTCTCAATTCCCCCTTTTGTAACTACCCCTTATCTACCTTTATATCTCAATGGGGATCTCTCTTGTAA
mRNA sequence
ATGACCCTTATCGACAAGTTTCTTATATCCGATGGAATCATAACCAAATTCACAAATGCCACTGCTCGCCGACTGGACAGAAACTCCTCTGATCATTTCCCTATCAGCCTCAATTTGGGGAAAGAGAAATGGGGACCAGCCCCTTTTAGGCTCAACATCGCTTGGGTTAATCATAGCTCCTTTCTCAATACAGTGGATTCTTGGTGGAAAAACACTCCCTCCATGGGCTGGCCAGGACATGGGTTCATACAAAAATTGAAAGGCCTCAAGAAGGAGCTTAAGCAATGGAATCACTCTGTTTTCGGTCAGTCTAAAGAGAAAAAATCCTGCCTGAGCAGAGAGCTTTCTTCCTTAGAACATAGGGAGGAGCTTGGTCAGCTTACCGCAGATGATATCAATAGAAGAATTGAGATAAAGGCTGCTCTTATCTCTATCTCGGCCAATGAGGAGATCTTGTGGCGACAGCAATGCAAGCTGAAATGGCTTAAAGAAGCTCCAAAGAAGGTCACCAAGGCCATTGAGAAGTTATACCACAGGTTCCTATGGAGTGGCAGTTCCGAGAAGAAAGGCTACCACCTTTTGAGGTGGTCTCATATTCAACTGCCTATGGAAGAGGGAGGTCGGGGCATTTTTGATATTCACAAGAAGAACATTTCTCTATTAGCTAAATGGTCTTGGAGATTCTATCGCGAGCCGAAAGCCCTTTGGAGGAAAATTATCACTACTAAATTTGGCCTTGCTTGGCGACAAGACCCTATTTTGGGAGGATGTTTGGCTGGGCGCATCTCCCTTGAAACACTCGTACCCATCTCTATTCAACCTATCGCTCAAGAAAAGGCCAGCATTGCCAATTTATGGAGCACAAATGAGGGGACCTGGAATCTCTTTTTAAGAAGGAATTTACTTGAATCTGAAATCCTAGAATGGGCCATGTTATCTCACCACCTCTCATCTTTCTCCCTCTCTAATAGGGATGATGCTTGGACTTGGCAGCTTGAAAGTGATGGTTTGTTCTCCACTGGGTCGCTCACTAAAAATTGGCTTCCTCATCCTTTTTGGGACCATGTTCAAGGCGCTTTTGGATGGCACTTTGCTAGACCAGGGAACATCCAAACTCTTCATCATTATTCTCTTCTTGGTCACCCCTTCAAAAACGACACTAAGATTCTTTGGCGGAACTTTTTGTATGCATTCTTCTGGAACTTGTGGTTAGAGAGAAATGCTAGAATCTTCAATAATAAGCAGCAGAATATTTATGCTTTCATCGAATCCACATCATACCTTGCTATGTATTGGAGCAGTCTCAATTCCCCCTTTTGTAACTACCCCTTATCTACCTTTATATCTCAATGGGGATCTCTCTTGTAA
Coding sequence (CDS)
ATGACCCTTATCGACAAGTTTCTTATATCCGATGGAATCATAACCAAATTCACAAATGCCACTGCTCGCCGACTGGACAGAAACTCCTCTGATCATTTCCCTATCAGCCTCAATTTGGGGAAAGAGAAATGGGGACCAGCCCCTTTTAGGCTCAACATCGCTTGGGTTAATCATAGCTCCTTTCTCAATACAGTGGATTCTTGGTGGAAAAACACTCCCTCCATGGGCTGGCCAGGACATGGGTTCATACAAAAATTGAAAGGCCTCAAGAAGGAGCTTAAGCAATGGAATCACTCTGTTTTCGGTCAGTCTAAAGAGAAAAAATCCTGCCTGAGCAGAGAGCTTTCTTCCTTAGAACATAGGGAGGAGCTTGGTCAGCTTACCGCAGATGATATCAATAGAAGAATTGAGATAAAGGCTGCTCTTATCTCTATCTCGGCCAATGAGGAGATCTTGTGGCGACAGCAATGCAAGCTGAAATGGCTTAAAGAAGCTCCAAAGAAGGTCACCAAGGCCATTGAGAAGTTATACCACAGGTTCCTATGGAGTGGCAGTTCCGAGAAGAAAGGCTACCACCTTTTGAGGTGGTCTCATATTCAACTGCCTATGGAAGAGGGAGGTCGGGGCATTTTTGATATTCACAAGAAGAACATTTCTCTATTAGCTAAATGGTCTTGGAGATTCTATCGCGAGCCGAAAGCCCTTTGGAGGAAAATTATCACTACTAAATTTGGCCTTGCTTGGCGACAAGACCCTATTTTGGGAGGATGTTTGGCTGGGCGCATCTCCCTTGAAACACTCGTACCCATCTCTATTCAACCTATCGCTCAAGAAAAGGCCAGCATTGCCAATTTATGGAGCACAAATGAGGGGACCTGGAATCTCTTTTTAAGAAGGAATTTACTTGAATCTGAAATCCTAGAATGGGCCATGTTATCTCACCACCTCTCATCTTTCTCCCTCTCTAATAGGGATGATGCTTGGACTTGGCAGCTTGAAAGTGATGGTTTGTTCTCCACTGGGTCGCTCACTAAAAATTGGCTTCCTCATCCTTTTTGGGACCATGTTCAAGGCGCTTTTGGATGGCACTTTGCTAGACCAGGGAACATCCAAACTCTTCATCATTATTCTCTTCTTGGTCACCCCTTCAAAAACGACACTAAGATTCTTTGGCGGAACTTTTTGTATGCATTCTTCTGGAACTTGTGGTTAGAGAGAAATGCTAGAATCTTCAATAATAAGCAGCAGAATATTTATGCTTTCATCGAATCCACATCATACCTTGCTATGTATTGGAGCAGTCTCAATTCCCCCTTTTGTAACTACCCCTTATCTACCTTTATATCTCAATGGGGATCTCTCTTGTAA
Protein sequence
MTLIDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSSFLNTVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEHREELGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLKEAPKKVTKAIEKLYHRFLWSGSSEKKGYHLLRWSHIQLPMEEGGRGIFDIHKKNISLLAKWSWRFYREPKALWRKIITTKFGLAWRQDPILGGCLAGRISLETLVPISIQPIAQEKASIANLWSTNEGTWNLFLRRNLLESEILEWAMLSHHLSSFSLSNRDDAWTWQLESDGLFSTGSLTKNWLPHPFWDHVQGAFGWHFARPGNIQTLHHYSLLGHPFKNDTKILWRNFLYAFFWNLWLERNARIFNNKQQNIYAFIESTSYLAMYWSSLNSPFCNYPLSTFISQWGSLL
Homology
BLAST of Lag0032990 vs. NCBI nr
Match:
XP_014630645.2 (uncharacterized protein LOC102661789 [Glycine max] >XP_028230503.1 uncharacterized protein LOC114410772 [Glycine soja])
HSP 1 Score: 151.8 bits (382), Expect = 1.5e-32
Identity = 83/252 (32.94%), Postives = 126/252 (50.00%), Query Frame = 0
Query: 4 IDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSSFLN 63
+D+FL+S +TK+ + LDRN H + L WGP PFR+ W+ + SF +
Sbjct: 61 LDRFLVSPKWLTKWPGSIQHPLDRNFFGHCLVLLRSKVVDWGPKPFRVQDCWLLNKSFKS 120
Query: 64 TVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEHREE 123
V W + GW G +K+K LK+ LK WN FG + +K + EL+ LE
Sbjct: 121 IVKECWLSQQQSGWGGFVLKEKIKKLKERLKTWNRDRFGDTLKKYKKIEGELNQLEVNLA 180
Query: 124 LGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLKEA----------PKKVTKAI 183
L+ + R +++ L + + E L RQ+ + W+KE PKKV +
Sbjct: 181 DRPLSPQQMIIRKQLQEDLWIAAQSHESLLRQKARATWVKEGDCNSRFFHLIPKKVNDKL 240
Query: 184 EKLYHRFLWSGSSEKKGYHLLRWSHIQLPMEEGGRGIFDIHKKNISLLAKWSWRFYREPK 243
L RFLW G S+ ++W + LP E+GG GI DI N+++L KW W + +
Sbjct: 241 VCLQCRFLWGGGSDTNKIGWIKWDTVCLPKEKGGLGIKDISTFNMAMLGKWRWNLFHDEG 300
Query: 244 ALWRKIITTKFG 246
LW KI+ +K+G
Sbjct: 301 QLWAKILVSKYG 312
BLAST of Lag0032990 vs. NCBI nr
Match:
XP_022158956.1 (uncharacterized protein LOC111025405 [Momordica charantia])
HSP 1 Score: 147.9 bits (372), Expect = 2.1e-31
Identity = 74/180 (41.11%), Postives = 103/180 (57.22%), Query Frame = 0
Query: 2 TLIDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSSF 61
+LID FL+++G I K A+R+ R +SDHFPI L+ G+ WG PFR W++H +F
Sbjct: 191 SLIDCFLLTNGCIDKLGMPIAKRMTRTTSDHFPILLDFGQNNWGLTPFRFENMWLSHKTF 250
Query: 62 LNTVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEHR 121
+++WW N P GWPGHG + KLK LK +K W F +K L+ ++SL+
Sbjct: 251 KPFLETWWGNKPLHGWPGHGLMMKLKSLKYAIKLWITEHFRCIHSQKEDLTNLMNSLDDL 310
Query: 122 EELGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLKEAPKKVTKAIEKLYHRFL 181
E +T D RI+ K L+S+ A EE WRQ+CK KWL E + K +HRFL
Sbjct: 311 EGSQPVTPDQSRARIQAKEDLLSVVAKEEAFWRQRCKQKWLCEGDENT-----KFFHRFL 365
BLAST of Lag0032990 vs. NCBI nr
Match:
KAG5574372.1 (hypothetical protein H5410_054506 [Solanum commersonii])
HSP 1 Score: 142.5 bits (358), Expect = 8.9e-30
Identity = 121/493 (24.54%), Postives = 180/493 (36.51%), Query Frame = 0
Query: 4 IDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSSFLN 63
+D+FL S +F N + + R SDH P+ L G + A F+ W+N F +
Sbjct: 1279 LDRFLYSIEWEVQFRNIRQQIMPRVISDHNPVMLQCGDWEQRKAYFKFENWWLNVEGFKD 1338
Query: 64 TVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEHREE 123
V +WW G P F KLK LK+++K W+ FG+ KK+ L EL+ ++ +
Sbjct: 1339 LVQNWWNGFVVEGCPDFKFSMKLKMLKQKIKDWSSVTFGELNNKKNSLLSELAEMDLIQN 1398
Query: 124 LGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLKE------------------- 183
LT D++ R + L ++ NEE WRQ+ ++ WLK+
Sbjct: 1399 DRVLTEDEMMIRATVLVELEELAKNEESRWRQKSRVLWLKQEVSQIRHLRAILTIFEGIS 1458
Query: 184 ------------------------------------------------------------ 243
Sbjct: 1459 GLHVNWQKSCLFPVNQVNNMQGRADNLGCQVASLPTKYLGMPLGAKNKKLEVWSEVLERS 1518
Query: 244 -------------------------------------APKKVTKAIEKLYHRFLWSGSSE 303
PK + K + KL FLW G+ E
Sbjct: 1519 ERKLTRWKSQYISLGGRLTLIKSVLDALPTYMLSLFPLPKSIGKKLNKLRRVFLWQGNKE 1578
Query: 304 KKGYHLLRWSHIQLPMEEGGRGIFDIHKKNISLLAKWSWRFYREPKALWRKIITTKFGLA 343
K+GY+L++W + + +GG GI + +N SLL KW WRF E ALWR+ I K+GL
Sbjct: 1579 KQGYNLVKWEEVTMSKAQGGLGIKKLSTQNTSLLQKWLWRFCCEDMALWRRFIAEKYGLQ 1638
BLAST of Lag0032990 vs. NCBI nr
Match:
PWA97226.1 (reverse transcriptase domain, Reverse transcriptase zinc-binding domain protein [Artemisia annua])
HSP 1 Score: 140.2 bits (352), Expect = 4.4e-29
Identity = 139/617 (22.53%), Postives = 216/617 (35.01%), Query Frame = 0
Query: 4 IDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSSFLN 63
ID+FL+ D + K+ NA+ R ++R+ SDH P+ ++ +GP PFRL +W+ +
Sbjct: 693 IDRFLVCDNVFNKWPNASVRAMNRDLSDHSPLVFSMIDMNFGPKPFRLFDSWLERPGCVE 752
Query: 64 TVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEHREE 123
+ S + + G P + KLK L+ LK+W E +S L +E E R E
Sbjct: 753 KIQSVLQEWTNSGPPDTNLLNKLKRLRFSLKEWFKVYSSHEVEVESRLRKEKEEFEMRME 812
Query: 124 LGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLK-------------------- 183
L D+ +E K AL I ++ RQ+ ++KW
Sbjct: 813 STDLEESDLWVWLECKKALEEIELHKARDIRQKSRVKWASLGDENSSFFHCVVNGRKARN 872
Query: 184 ------------EAPKKVTKAIEKLY--------------------HRFLWSGSSEKKGY 243
E P V + I K + RFLW+G+SE+K
Sbjct: 873 FIPGIAIDGEWIEKPTLVKREIMKFFRNHFKESNPYRPSLSCAAIMRRFLWAGTSEEKKV 932
Query: 244 HLLRWSHIQLPMEEGGRGIFDIHKKNISLLAKWSWRFYREPKALWRKIITTKFGLA---- 303
+ W I P +GG G+ + N +LL KWSWRF +E +LW+ +I + G +
Sbjct: 933 PWVAWDIISNPKSKGGLGVSKLQHVNEALLLKWSWRFKKEGNSLWKNVIMSCHGSSRPWA 992
Query: 304 -----------WRQDPILG---------------GCLAG-----------------RISL 363
W+Q +G GCL RI
Sbjct: 993 MLPCSISASGCWKQIVKVGEQKLPNGAIINSYFIGCLGDGSTFNFWGDIWLGDDPLRIKY 1052
Query: 364 ETLVPISIQPIAQEKASIANLWSTNEGTWNLFLRRNLLESEILEWAMLSHHLSSFSLSNR 423
L + + I + + TWN + R EI E +L + +
Sbjct: 1053 PHLFKLESNKWVKVSGRINCINNVKVVTWN-WRREPSTYMEITELFLLLGEIYDLNWQGG 1112
Query: 424 DDAWTWQLESDGLFSTGSLT-----------------KNWLP------------------ 445
D W W+ +DG+FS S K W+P
Sbjct: 1113 WDVWKWKASNDGIFSVASARKIISDHIPVDNSTKIKWKCWVPLKCKIMVWRAARNRLPTT 1172
BLAST of Lag0032990 vs. NCBI nr
Match:
RVW99725.1 (DNA repair protein RAD50 [Vitis vinifera])
HSP 1 Score: 133.3 bits (334), Expect = 5.4e-27
Identity = 65/176 (36.93%), Postives = 101/176 (57.39%), Query Frame = 0
Query: 4 IDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSSFLN 63
+D+FL S+ F + L R +SDH+PI L+ KWGP PFR W+ H +F
Sbjct: 118 LDRFLYSNEWELSFPQSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHYNFKE 177
Query: 64 TVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEHREE 123
+ SWW+ GW GH F++KL+ +K +LK WN + FG KE+K +S E+++++ E+
Sbjct: 178 SFSSWWREFEGNGWEGHKFMRKLQFVKAKLKDWNKNTFGMLKERKKTISDEIANIDAIEQ 237
Query: 124 LGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLKEAPKKVTKAIEKLYHR 180
G L++D + +R K L + EEI W+Q+ K+KW+KE KL+H+
Sbjct: 238 EGALSSDLVAQRAIRKGELEELILREEIHWKQKAKIKWVKEG-----DCNSKLFHK 288
BLAST of Lag0032990 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 1.4e-09
Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 0
Query: 166 PKKVTKAIEKLYHRFLWSGSSEKKGYHLLRWSHIQLPMEEGGRGIFDIHKKNISLLAKWS 225
P+ + +++L FLW ++EKK HL++WS + P +EGG G+ N +L++K
Sbjct: 59 PQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVG 118
Query: 226 WRFYREPKALWRKIITTKF 245
WR +E +LW ++ K+
Sbjct: 119 WRLLQEKNSLWTLVLQKKY 137
BLAST of Lag0032990 vs. ExPASy TrEMBL
Match:
A0A2N9ESC2 (Endo/exonuclease/phosphatase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5565 PE=4 SV=1)
HSP 1 Score: 151.0 bits (380), Expect = 1.2e-32
Identity = 133/449 (29.62%), Postives = 187/449 (41.65%), Query Frame = 0
Query: 1 MTLIDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSS 60
M+ ID+FL S F+ RRL + SDHFPI L+ G G +PF W+
Sbjct: 169 MSRIDRFLFSPDWADHFSLVNQRRLPQLLSDHFPIVLDFGHLNGGKSPFFFENMWLKVDG 228
Query: 61 FLNTVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEH 120
F+N + +WW + G P KLK LK +LK+WN FG +KK+ L L +
Sbjct: 229 FVNRIKAWWDSYVFQGSPSFILANKLKALKMDLKRWNREEFGNIGQKKNNLMHSLHLPDT 288
Query: 121 REELGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLKEA--------------P 180
E + + I I +K S+S + + + K+ +K P
Sbjct: 289 IAEGAKFKSKAIWDPILMKLER-SLSGWKSLYLSKGGKMTLIKSTLSSLPTYFLSLFPIP 348
Query: 181 KKVTKAIEKLYHRFLWSGSSEKKGYHLLRWSHIQLPMEEGGRGIFDIHKKNISLLAKWSW 240
V I+K+ FLW G E +HL+ WS I P GG GI ++ N +LL KW W
Sbjct: 349 VNVAVRIDKIQRDFLWCGVGEGVKFHLVNWSQICQPFSFGGLGIHNLRVFNKALLGKWLW 408
Query: 241 RFYREPKALWRKIITTKFGLAWRQDPILGGCLAGRISLETLVPISIQPIAQEKASIANLW 300
RF E ALWR++I +K+ GCL G + VP S + +LW
Sbjct: 409 RFGTERTALWRQVIASKY-----------GCLHGGWCSKE-VPGS---------NGISLW 468
Query: 301 STNEGTWNLFLRRNLLESEILEWAMLSHHLSSFSLSNRDDAW---TWQLES-----DGLF 360
W F SE L + + HL F S W W+LES D L+
Sbjct: 469 KNIRKEWGHF-------SEFLTFEIGDGHLVHFWHS----VWPVQDWELESVSSFLDLLY 528
Query: 361 S---------TGSLTKNWLPHPFWDHVQGAFGWHFARPGNIQTLHHYSLLGHPFKNDTKI 419
S S K + HV FG + P I L G + +I
Sbjct: 529 SIHATAMGYDRQSAKKESSSNELVLHV--IFGVQWVMPSGIMALLACWRNGLSQSRNIEI 581
BLAST of Lag0032990 vs. ExPASy TrEMBL
Match:
A0A6J1E2G6 (uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025405 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 1.0e-31
Identity = 74/180 (41.11%), Postives = 103/180 (57.22%), Query Frame = 0
Query: 2 TLIDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSSF 61
+LID FL+++G I K A+R+ R +SDHFPI L+ G+ WG PFR W++H +F
Sbjct: 191 SLIDCFLLTNGCIDKLGMPIAKRMTRTTSDHFPILLDFGQNNWGLTPFRFENMWLSHKTF 250
Query: 62 LNTVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEHR 121
+++WW N P GWPGHG + KLK LK +K W F +K L+ ++SL+
Sbjct: 251 KPFLETWWGNKPLHGWPGHGLMMKLKSLKYAIKLWITEHFRCIHSQKEDLTNLMNSLDDL 310
Query: 122 EELGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLKEAPKKVTKAIEKLYHRFL 181
E +T D RI+ K L+S+ A EE WRQ+CK KWL E + K +HRFL
Sbjct: 311 EGSQPVTPDQSRARIQAKEDLLSVVAKEEAFWRQRCKQKWLCEGDENT-----KFFHRFL 365
BLAST of Lag0032990 vs. ExPASy TrEMBL
Match:
A0A2U1QGT5 (Reverse transcriptase domain, Reverse transcriptase zinc-binding domain protein OS=Artemisia annua OX=35608 GN=CTI12_AA030820 PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 2.1e-29
Identity = 139/617 (22.53%), Postives = 216/617 (35.01%), Query Frame = 0
Query: 4 IDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSSFLN 63
ID+FL+ D + K+ NA+ R ++R+ SDH P+ ++ +GP PFRL +W+ +
Sbjct: 693 IDRFLVCDNVFNKWPNASVRAMNRDLSDHSPLVFSMIDMNFGPKPFRLFDSWLERPGCVE 752
Query: 64 TVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEHREE 123
+ S + + G P + KLK L+ LK+W E +S L +E E R E
Sbjct: 753 KIQSVLQEWTNSGPPDTNLLNKLKRLRFSLKEWFKVYSSHEVEVESRLRKEKEEFEMRME 812
Query: 124 LGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLK-------------------- 183
L D+ +E K AL I ++ RQ+ ++KW
Sbjct: 813 STDLEESDLWVWLECKKALEEIELHKARDIRQKSRVKWASLGDENSSFFHCVVNGRKARN 872
Query: 184 ------------EAPKKVTKAIEKLY--------------------HRFLWSGSSEKKGY 243
E P V + I K + RFLW+G+SE+K
Sbjct: 873 FIPGIAIDGEWIEKPTLVKREIMKFFRNHFKESNPYRPSLSCAAIMRRFLWAGTSEEKKV 932
Query: 244 HLLRWSHIQLPMEEGGRGIFDIHKKNISLLAKWSWRFYREPKALWRKIITTKFGLA---- 303
+ W I P +GG G+ + N +LL KWSWRF +E +LW+ +I + G +
Sbjct: 933 PWVAWDIISNPKSKGGLGVSKLQHVNEALLLKWSWRFKKEGNSLWKNVIMSCHGSSRPWA 992
Query: 304 -----------WRQDPILG---------------GCLAG-----------------RISL 363
W+Q +G GCL RI
Sbjct: 993 MLPCSISASGCWKQIVKVGEQKLPNGAIINSYFIGCLGDGSTFNFWGDIWLGDDPLRIKY 1052
Query: 364 ETLVPISIQPIAQEKASIANLWSTNEGTWNLFLRRNLLESEILEWAMLSHHLSSFSLSNR 423
L + + I + + TWN + R EI E +L + +
Sbjct: 1053 PHLFKLESNKWVKVSGRINCINNVKVVTWN-WRREPSTYMEITELFLLLGEIYDLNWQGG 1112
Query: 424 DDAWTWQLESDGLFSTGSLT-----------------KNWLP------------------ 445
D W W+ +DG+FS S K W+P
Sbjct: 1113 WDVWKWKASNDGIFSVASARKIISDHIPVDNSTKIKWKCWVPLKCKIMVWRAARNRLPTT 1172
BLAST of Lag0032990 vs. ExPASy TrEMBL
Match:
A0A2N9F8S0 (zf-RVT domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11455 PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 2.1e-29
Identity = 98/346 (28.32%), Postives = 130/346 (37.57%), Query Frame = 0
Query: 1 MTLIDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSS 60
M+ ID+FL SD F + +RL R SDHFPI L G PFR W+
Sbjct: 725 MSRIDRFLYSDEWDDFFPSILQKRLPRILSDHFPIILECGDFSRSRRPFRFENMWLKADG 784
Query: 61 FLNTVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEH 120
F V WW + G PG+ KLK LK +LK+WN VFG K++ L EL L+
Sbjct: 785 FKERVKEWWDSYIFYGTPGYIMACKLKALKVDLKKWNEEVFGNVGVKRNKLMSELVELDA 844
Query: 121 REELGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLKEA--------------- 180
+L LT + ++ I A L S S EEI WRQ+ + WL+E
Sbjct: 845 VADLRPLTGVENQKKAVIVADLESTSLLEEISWRQKSRALWLREGDKNTKFFHRFLLGIL 904
Query: 181 ------------------------------------------------------------ 240
Sbjct: 905 VPLHLEELCSDVEKATVNWGFLIYLLQGCNGGTIRSSNAILPIWVFRWTAFGSGWKGSKG 964
Query: 241 -----------------------PKKVTKAIEKLYHRFLWSGSSEKKGYHLLRWSHIQLP 249
P +V +EKL FLW G E +HL+ WS I P
Sbjct: 965 GKVTLIKSTLSSIPTYFLSLFPIPARVANQLEKLQRDFLWCGMDETPKFHLVNWSQICTP 1024
BLAST of Lag0032990 vs. ExPASy TrEMBL
Match:
A5C3T9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000598 PE=4 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 2.6e-27
Identity = 65/176 (36.93%), Postives = 100/176 (56.82%), Query Frame = 0
Query: 4 IDKFLISDGIITKFTNATARRLDRNSSDHFPISLNLGKEKWGPAPFRLNIAWVNHSSFLN 63
+D+FL S+ F + L R +SDH+PI L+ KWGP PFR W+ H +F
Sbjct: 1717 LDRFLYSNEWXLSFPQSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHNFKE 1776
Query: 64 TVDSWWKNTPSMGWPGHGFIQKLKGLKKELKQWNHSVFGQSKEKKSCLSRELSSLEHREE 123
+ SWW+ GW GH F++KL+ +K +LK WN + FG KE+K +S E+++++ E+
Sbjct: 1777 SFSSWWREFEGNGWEGHKFMRKLQFVKAKLKDWNKNTFGLLKERKKSISDEIANIDAIEQ 1836
Query: 124 LGQLTADDINRRIEIKAALISISANEEILWRQQCKLKWLKEAPKKVTKAIEKLYHR 180
G L++D + R K L + EEI W+Q+ K+KW+KE KL+H+
Sbjct: 1837 EGALSSDLVALRAIRKGELEELILREEIXWKQKAKIKWVKEG-----DCNSKLFHK 1887
BLAST of Lag0032990 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 59.7 bits (143), Expect = 7.1e-09
Identity = 28/79 (35.44%), Postives = 38/79 (48.10%), Query Frame = 0
Query: 166 PKKVTKAIEKLYHRFLWSGSSEKKGYHLLRWSHIQLPMEEGGRGIFDIHKKNISLLAKWS 225
PK V K I + F W E KG H W H+ EGG G DI N++LL K
Sbjct: 14 PKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQM 73
Query: 226 WRFYREPKALWRKIITTKF 245
WR P++L K+ +++
Sbjct: 74 WRMLSRPESLMAKVFKSRY 92
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_014630645.2 | 1.5e-32 | 32.94 | uncharacterized protein LOC102661789 [Glycine max] >XP_028230503.1 uncharacteriz... | [more] |
XP_022158956.1 | 2.1e-31 | 41.11 | uncharacterized protein LOC111025405 [Momordica charantia] | [more] |
KAG5574372.1 | 8.9e-30 | 24.54 | hypothetical protein H5410_054506 [Solanum commersonii] | [more] |
PWA97226.1 | 4.4e-29 | 22.53 | reverse transcriptase domain, Reverse transcriptase zinc-binding domain protein ... | [more] |
RVW99725.1 | 5.4e-27 | 36.93 | DNA repair protein RAD50 [Vitis vinifera] | [more] |
Pages
Match Name | E-value | Identity | Description | |
P0C2F6 | 1.4e-09 | 32.91 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A2N9ESC2 | 1.2e-32 | 29.62 | Endo/exonuclease/phosphatase domain-containing protein OS=Fagus sylvatica OX=289... | [more] |
A0A6J1E2G6 | 1.0e-31 | 41.11 | uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A2U1QGT5 | 2.1e-29 | 22.53 | Reverse transcriptase domain, Reverse transcriptase zinc-binding domain protein ... | [more] |
A0A2N9F8S0 | 2.1e-29 | 28.32 | zf-RVT domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11455 P... | [more] |
A5C3T9 | 2.6e-27 | 36.93 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000598 PE=4 SV=1 | [more] |
Pages
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 7.1e-09 | 35.44 | Ribonuclease H-like superfamily protein | [more] |