Lag0032987 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032987
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	60S ribosomal protein L37a
Location	chr11: 39542678 .. 39546651 (-)
RNA-Seq Expression	Lag0032987
Synteny	Lag0032987

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCTCCTCCCTCTTGTATTTTTTTTTAAAAAAAGAAAAGAAGAAAAATGGTGTAAGAGAGAAGAAGAAAGGAGAAGAAAAACAAATTACCCGGCGGCCGGCCGGCGACGGCGAGCGGTGGCCGACAGCTGGCGCCGACCGCCGGAGATTTGAAGAAGAAGATGGAGGGGTTGAGGGAAGAAGATGAAGGAGAGGGTGGAGGGTTAAGTTTTAAAAATAATTAAAATAAATAATATTTTTATTGTTTTTTTTTATTTTTTTTTTATTTTAAAATTAAAAAATATTTTTTAAATTAAAAAAATGTGGCCAAGTCAGCAATCTGTTAGAATTTAACGGAAAATTGAATGGCAGGGACCAAAGTGCTCCTTATCTCAAACCTTAGGGGTATTTTTGTTGAGTTTGAAACATCAGGGACCAAAGTGTCACTTAACCCAAACCTTAGGGACCAAAAGTGTATTTTTCCTTTTTTTTTTTAGAACATCAATATTTGGGATAGCGGAATTCGAACTCTGACCTCTTTATTGAGGATATATGCCAATTACCGTTGAGTTAAACTCAATAAATTCAAGAGATTGAAATATAGATCTAAAATCAATTGTGTTTCTTCTTTTCGTACAACAAATATGAGATAGAGTTTTGAACATCCAAACTTAAAAGAAAAGGTAGATACATCAATTGCTTAAGTATACATATGTTGACTATTAATGTCTCTATCTACTAATTTGAGATACTCCAACCAAAAAAAAAATAAAAAAGTTGAATGCTATATTATGTTACTACTAATAATTTTTTTTTAAAGAGACTAATCATTCTTGAATGCAAATTTGTATGTCCTATAATATATATTAAAATATAAATTCAAAACACATTTTATTATTTATATAATAACTTCCAATAATGTAAAGCCACCGATCACATAATTCTAATCTTTTCCAATAATTTCTCGAAAATAAAAGAAAGCTTTTCTGGTCAATTCGTTATTTTGGGCCTTCAATTAAACGTGGCCCAAAATTATTCAGGGGAAACAAATTATTATCAAAATTAAAAATTCCGTTGCCGGGAATCGAACCCGGGTCTCTCGGGTGAGAGCCGAGTATCCTAACCAACTAGACTACAACGGAAGCTTTGTTGACAAAAATAAATTTAAAATATAACTAATAAAATATCTAACCGGATCAAGGCGACCCGCTTCGTTCGACCCGTTTTGACCGGGCCTTTGATCTTATTATTGTAAAGGAAAATTTCAATTCTAGGGTTTCTCTGGTTCAAGTTCTTCACACTTTCACCAAATCTTCTTCCGGAGATCTTGTGTTCCAAGCAGCAATGGTAATTCCTCTCCCTTCGATTCATTGGCGCGTAAAATTTTCGACTCTCTCTGTTTCTGCGAAGAGATTTTTCTCTGAAAATTATTCACTTTATTTGTTCGTACTGTTCTGTTGGACATACTTTGTCTTGTTCTTACTATTGGAAATTAAATTGTTTTCTTGAAGAATTTGGGGGGTGCTCCTTTTTTTTTTTTTTTTTTTTTTTCTAATAGGTGAAATTCTGCCCCGTTTTATGAAATTTCCATGATTCGGGTTGACTGTTATGTTTCTATTGGGCACCGGAACATTGCATTGTTAGTTTCTGTTCAACTGTTCTAGTTATGTTTGTTTTTGATTGAAGGTAACCTGAGTGATCGAGCTGCTTCTGTTTACCAATCTTTTATCCTTAAAAATTGGAATTGGTGACATTGGATTACACCAGTATAGAATAGCTTGTAGATACGAAAAGAGAATGCAATAAGTTTTGGAATTTGTAAATGTATCCCGACTCACTAGTATTTTGGTTTTAATTTATCTTTGACAACCATGTTGAACTCCAAAGGTGGTTATTATGTGTAGCATTTTTAAGTGTCATCACTGTCTGTCTGATGCTCCATAAAAGGATTAAGTGCTTTTTGATGCAATTAACGTATATTTGAACTTTGAAGTTTGGTGGTCGTTGTTGTTGATATGGTTCGGGTGTGGAAACTGCCAAGAGTTCAGTAGAATTGTGTTCAGTGTTTTAAAAGGCGCGCCCGGGCGCGCGCCTAGGCGCGCCTAGGCGCAACATTTGCGCCTCGCTTCGAAGAAGCGAGGCGCAGTGAGGAAGGCGCGGCCAAGGCGCGCGCCTTCCTCGAAGCCCCCGAGGCGCGCGCCTTAGGCGCCTCTGGGGCTTCACATTTTTACACATGTTTTAAATATTTTTAAGCCAAAATTTAAGTTATGAAGCTAATTTTAAATTTAGCTGACCGGGCAGCGAGACCCCGTACTTGTCGTTCGGAGTGTCAAATATCATATTCAAGGCATATATTTTTTGTGGAGTATTGACATCATCATACTTGGTCGTTTGGAGTGTCAGAAGGCATATTAACAATACTAAACTCACTATTTTTTGTGGAGTATTGACATTTGACTCTATGTTGGAAGACTAATATTTGAACCTTATTTATCTTTTATCTATTTTTCTTAGTTAAAAAATTCATTACTTGCCATGAAAGTGTTTTATATACATGTATATATTTTTGTAAATTTTTTTTCTATATGGTGCGCCTTACATAATAAAGCCCGCGCCTTTTCGTGCGCCTTGCGCCTAGGCTCCAGGAGGCCATTGCGCCTTAGTGCGCCTTGAGCCTTTTAAAACACTGATTGTGTTGCTTGCCTCCAACATAGTTGTTTCTCTTACCCTAAACCCTAAACCCTGGATTTCTTCTACTATGTATTGAAATGCTTAACATTCTTTTGGTTAGAATTGACTATCGAGTATTTCACTTTTGGTTAGAATTGACTATCGAGTATTTCATTCATATTTTTCGATGTACTATGTTTTAGACTGATGAATTGCTTTTTACTCAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGTAATATTTGAAAATTCAGTTTTCGCTTGATATTTTTAGTATCTTGGAGTTCACATGACTATTTTTCCAGAGAGTGTTTGTTTTCTATTATCGTTATTCTGCATCTATTCCAGTAATCCAGTCTGAAGCTTTTTACTTTTATCCTATTCCTGCCCTAGATACCATCCCGGGAATTTTCAAGGAGTTTCTTGATTCCTCTGATAGAATACTACCCTAGTATCCTGTTTGAGCCCTATTGTTTTCTAGTAGTTTTATCTGTTTGGTTTTCTTTTTAGAAAAGTCATGGACGACCTTTAGAGATATAGTGATAAGTCACAGAGGTTATTAGGACCAAAGAAAGAGTTTCCTCTTTAGAAACCAAACCTTCAAAACGAATTGCCTGTCTTGGGACTAAAAATAAAATGGCACCATTGATATGATGGCTTTGGTGGTCAGATTTCCTTAAAAATGTTTTGTGAAATGTGGCACGAGCACGATATACATCAAAATCATCAGCAAACCAAATCGCTTGAACTTTGAAGATCTCTGCAATGTATTGGGATTATAAGTCCAGACCTATGTGCACTCTAGCTGGCTCACTTTTTTGCATGGAGAAATTTCTATTTCCTTCTTCATCTCGTAACTTTGGCCGATAACAGGTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTCTGTGGAAAGGCAAGTAGTTTTCCTTATTTTACCCAAGTTTTCGTTTCCATCACTTCTTCATGTTCCAATTATATGCTTCCCCATTGCAGTATGCAGTGAAGAGGAAGGCAGTCGGAATTTGGGGTTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAAGTAACTATACATCTTATTTTTCTTTGGTTTTTTCTTCATTTTTTGTTATATAACTTTAAATGACTTTCATTTTGATGTTATTTTTGGTAACTTTGACAGCACTGCTAGTGCTGTGACAGTGAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAA

mRNA sequence

ATGGATCCCTCCTCCCTCTTGTATTTTTTTTTAAAAAAAGAAAAGAAGAAAAATGGTGTAAGAGAGAAGAAGAAAGGAGAAGAAAAACAAATTACCCGGCGGCCGGCCGGCGACGGCGAGCGGTGGCCGACAGCTGGCGCCGACCGCCGGAGATTTGAAGAAGAAGATGGAGGGGAAAATTTCAATTCTAGGGTTTCTCTGGTTCAAGTTCTTCACACTTTCACCAAATCTTCTTCCGGAGATCTTGTGTTCCAAGCAGCAATGACTGATGAATTGCTTTTTACTCAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTTGAAGAGGAAGGCAGTCGGAATTTGGGGTTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAA

Coding sequence (CDS)

ATGGATCCCTCCTCCCTCTTGTATTTTTTTTTAAAAAAAGAAAAGAAGAAAAATGGTGTAAGAGAGAAGAAGAAAGGAGAAGAAAAACAAATTACCCGGCGGCCGGCCGGCGACGGCGAGCGGTGGCCGACAGCTGGCGCCGACCGCCGGAGATTTGAAGAAGAAGATGGAGGGGAAAATTTCAATTCTAGGGTTTCTCTGGTTCAAGTTCTTCACACTTTCACCAAATCTTCTTCCGGAGATCTTGTGTTCCAAGCAGCAATGACTGATGAATTGCTTTTTACTCAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTTGAAGAGGAAGGCAGTCGGAATTTGGGGTTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAA

Protein sequence

MDPSSLLYFFLKKEKKKNGVREKKKGEEKQITRRPAGDGERWPTAGADRRRFEEEDGGENFNSRVSLVQVLHTFTKSSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFLKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Homology

[Close]

BLAST of Lag0032987 vs. NCBI nr
Match: KAG6571778.1 (SNF2 domain-containing protein CLASSY 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 175.6 bits (444), Expect = 3.7e-40
Identity = 98/122 (80.33%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 66   SLVQVLHTFTKSSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKME 125
            SLVQVL TFTKSS GD+V   A         TKRTKKAGIVGKYGTRYGASLRKQIKKME
Sbjct: 1116 SLVQVLPTFTKSSPGDIVVGRA-------EMTKRTKKAGIVGKYGTRYGASLRKQIKKME 1175

Query: 126  VSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT 180
            VSQHSKYF        +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT
Sbjct: 1176 VSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT 1230

[Close]

BLAST of Lag0032987 vs. NCBI nr
Match: KAD4982632.1 (hypothetical protein E3N88_19303 [Mikania micrantha])

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-36
Identity = 89/111 (80.18%), Postives = 91/111 (81.98%), Query Frame = 0


Query: 77  SSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--- 136
           S SG  VF         FTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+F   
Sbjct: 369 SGSGGSVFDTLSGVRPGFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEF 428

Query: 137 -----LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 180
                +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 429 CGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 479

[Close]

BLAST of Lag0032987 vs. NCBI nr
Match: VVA26227.1 (PREDICTED: 60S ribosomal [Prunus dulcis])

HSP 1 Score: 161.0 bits (406), Expect = 9.5e-36
Identity = 84/95 (88.42%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 93  LFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGC 152
           +F+QTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGC
Sbjct: 4   VFSQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGC 63

Query: 153 KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 180
           KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 64  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 98

[Close]

BLAST of Lag0032987 vs. NCBI nr
Match: XP_006644519.1 (60S ribosomal protein L37a-1 isoform X1 [Oryza brachyantha] >XP_006661706.1 60S ribosomal protein L37a-1 isoform X1 [Oryza brachyantha])

HSP 1 Score: 161.0 bits (406), Expect = 9.5e-36
Identity = 83/95 (87.37%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 93  LFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGC 152
           +FTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGC
Sbjct: 1   MFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGC 60

Query: 153 KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 180
           KDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 61  KDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 95

[Close]

BLAST of Lag0032987 vs. NCBI nr
Match: KOM32511.1 (hypothetical protein LR48_Vigan01g206700 [Vigna angularis] >BAT75782.1 hypothetical protein VIGAN_01370100 [Vigna angularis var. angularis])

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-35
Identity = 84/96 (87.50%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 92  LLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWG 151
           +LF QTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+F        +KRKAVGIWG
Sbjct: 31  ILFWQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWG 90

Query: 152 CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 180
           CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 91  CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 126

[Close]

BLAST of Lag0032987 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-36
Identity = 80/91 (87.91%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 97  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCG 156
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCKDCG
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCG 61

Query: 157 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 180
           KVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 62  KVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of Lag0032987 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-36
Identity = 80/91 (87.91%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 97  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCG 156
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCKDCG
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCG 61

Query: 157 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 180
           KVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 62  KVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of Lag0032987 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.4e-36
Identity = 81/91 (89.01%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 97  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCG 156
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCK CG
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACG 61

Query: 157 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 180
           KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 62  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of Lag0032987 vs. ExPASy Swiss-Prot
Match: Q9ZRS8 (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.9e-36
Identity = 79/90 (87.78%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 97  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCG 156
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+F        +KRKAVGIWGCKDCG
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCG 61

Query: 157 KVKAGGAYTLNTASAVTVRSTIRRLREQTE 179
           KVKAGGAYTLNT SAVTVRSTIRRLREQTE
Sbjct: 62  KVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91

[Close]

BLAST of Lag0032987 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.8e-35
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 97  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCG 156
           TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYF        +KRK VGIWGCKDCG
Sbjct: 2   TKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCG 61

Query: 157 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 180
           KVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 62  KVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

The following BLAST results are available for this feature:

BLAST of Lag0032987 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571778.1	3.7e-40	80.33	SNF2 domain-containing protein CLASSY 3, partial [Cucurbita argyrosperma subsp. ...	[more]
KAD4982632.1	1.9e-36	80.18	hypothetical protein E3N88_19303 [Mikania micrantha]	[more]
VVA26227.1	9.5e-36	88.42	PREDICTED: 60S ribosomal [Prunus dulcis]	[more]
XP_006644519.1	9.5e-36	87.37	60S ribosomal protein L37a-1 isoform X1 [Oryza brachyantha] >XP_006661706.1 60S ...	[more]
KOM32511.1	1.6e-35	87.50	hypothetical protein LR48_Vigan01g206700 [Vigna angularis] >BAT75782.1 hypotheti...	[more]

BLAST of Lag0032987 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DKK1	1.5e-36	87.91	60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g06...	[more]
P0DKK2	1.5e-36	87.91	60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g05...	[more]
Q9XHE4	3.4e-36	89.01	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1	[more]
Q9ZRS8	9.9e-36	87.78	60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1	[more]
Q9SRK6	3.8e-35	85.71	Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011331	Ribosomal protein L37ae/L37e	GENE3D	2.20.25.30		coord: 96..179 e-value: 8.4E-32 score: 111.1
IPR002674	Ribosomal protein L37ae	PFAM	PF01780	Ribosomal_L37ae	coord: 99..175 e-value: 4.3E-28 score: 97.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..36
None	No IPR available	PANTHER	PTHR48132:SF2	60S RIBOSOMAL PROTEIN L37A-2	coord: 89..179
None	No IPR available	PANTHER	PTHR48132	ZGC:171772	coord: 89..179
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 105..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032987.1	Lag0032987.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0009536	plastid
cellular_component	GO:0005840	ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003735	structural constituent of ribosome