Lag0032966 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032966
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RGG repeats nuclear RNA binding protein A-like
Location	chr11: 39350982 .. 39354011 (+)
RNA-Seq Expression	Lag0032966
Synteny	Lag0032966

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCATGAACCCTTTTGATCTCTTGGTCGACGACGACAACGAGGACCCAAATCAGCTCGCTTCTGCTCAGCGGTCCGCTCCGGCGCTGCCCTCCAAGAAGGCCCCTGCTCCGGCTGCTCAGCCTGCCAAACCGGCTAAGCTTCCTTCCAAGCCTCTCCCTCCCGCTCAGGCTGGTGGGTTTTGTTTCTTGACTTGTACTATTGTTTTGTTTGTGTTTTTTCCCCCTGTTTTGTTATTTGTTTCGATGTGAAGTAAGAATGATGAGGTTTTCAATCTGTTTGCTTATGATTTTGTCATCGATATGATGTTTGGGATTTTTTTGGATTTGTATTTATTGGTTGTAGTTGGTGGGTTTGTTCTGCAATGCTGTATTATTGCTTGAATGGATGTATTGTGAAATTCTTCAGTGGTTCGATGGTTATATGTTCTTTTTGGATTGAACTGATTCTATAACGTATGATACTTTTATTTAAATATGATTATATGTTCTTCTTTCTGCGGTTAAGAGTATTTGAATGGACACATTTTATTTAAATATGGTTGTGAATGTTTTGATAATGATTTTCTTAATGAGTATGTGACATATCTTTATGGTCAGTGATTTGAAAAAAGAAAGAATATTGATCGTTCTGATTATTCACGCTTAAATTATTGACATTTTTTAAATGCTTGAAGTAAAGTTGAAGTCTGAAAATATAGAAATTTAATGAAGGGACTAAATAATTTTGCTCAAGGATTAAACAAATCTTTTCGGATGTTGTATACAATCTAAAGCAGGTAATTATGTTTTTGTGAATAGCAGGCATTTTCGCTTGCTTGACTGATATATTTAACTTAATTTTATCTTGCAAATTAACTGCCTTGGAGGAGCAGGTACATCTAAAGAGGCATTCATATAAGAAGTTAATATTGCAGTTCCTTTCAATTAATAGTGAAAAGTTGAAAGTTACAGCGTTGGTTTTATTTCTGTACAGAGCTTAGGAAGTAGGAAATACATGAGTGTTAACTTGGTTTGTTATAAAAAAAACGTAAGTGTTAACTTGTTGGCCTCTTTGTATTATTAATTATTATTTTGTTTAATATGGCTAATTTGTTTTTGATGTAATGTAACTTTGGGCATTATTTTGACTTAAATTTTATTTATGACCAGTAAGAGAGGCAAAGAGTGAAAATAGCCGTGGTCGTGGGGGTGGACGTGGCTATGGACGAGGACGTGGTGGTGGTGGAGGATTCAACAGAGACTCAGCCAATAATGAAAATGGTGGTAAGAATGGATTCTCTGATCGTTACCCGCCAACTGAGGAAGGTGAAAAGGGGGCTGAAAAGCGTGGTTATGGTGCTCCCCGTGGCTCTTTCCGTGGTCCTCGTCGGGGAGGCTTCAGTAATGGTGAGGCAGAAGAAGGGGAAAGACCCCGAAGATTATATGAACGACGCAGTGGAACTGGACGCGGGTTAGTATATTCTTTATTGAGAATACTAGTTTTCTGTTGATCAATTTCCCGGATTTTTTTTTCATTTATCTTACACTGGTTGTTTTGATTATAGAAATGAGTTTAAGCGTGAAGGAGCTGGTCGTAGGAACTGGGGATCTCCTGGTGATGAAATTGCCCCGTGAGTTTGTCTTGTCCAATTGAGACAAATTAACCAATTTGATAATGTAGCTTTGTTATTTACTTGACTTTGTAATTGAAGGGATGTGGAAGTGCCTGTTGCTGAAAATGAGAAGATTGTTGCTCCAGAGCAACAGCTTGGAGAGGATGTGGTCGTTGATGATAACAACAAAGAGGAGGCTGTGAAGGAACCAGAAGAGAAGGAGGCTGAGGACAAGGTAAGAGTTCTCGTTTGAAGTGTTGTTATATTTATTAAACTGTCGTGTCAATTGGCTATATAATCTGTTCCTCCACTATTCTCTTATAGGAAATGACCCTCAAGGAGTATGAGAAGCTCCGTGAAGAGAGTAGGAAAATGCTCGCAAGGACTGAGTTGAGGAAGGCTGAGATGGATGAGGAATTAGAGAACATGCAGCAGCTTTCCAGCAAGAAAAGCAATGATGAAATCTTTGCTAAATTGGTAAGAGCTCTTCTCATGGTACCTTCACGATTCTTTTTTAGCTTTGGTTTTGTAGCTAACCGTACAGAATTTTATTGCAGGGTGCTGATAAGGATAAGCGCAAAGAAATTGCTGACAAGGAGGAGAAAGCTAAGAAGGTATGTATTATTGTGCTTCAGCAACTCATTATTGTCTGGTCTTTATAAATTAAATATCAGAAAATAACCTGAAATGTCGTTCTCATATTATTGATGCCTTAATTGTTGATGAACTTTGTGGATTTGATTCTTATGAATTAAATTTTCTTGGCTGTTGATGTTCACTTCGTATGCAACGTGCAAATGTTGGTTTTGGATTTATTTTGCAGTTTTGAGTTACTCGTAGGATGCTTATATAGAATATATAAGAAGGTATGTATTATTGTGCTTCAGCAACTCATTATTGTCTGGTCTTTATAAATTAAATATCAGAAAATAACCTGAAATGTCGTTCTCATATTATTGATGCCTTAATTGTTGATGAACTTTGTGGATTTGATTCTTATGAATTAAATTTTCTTGGCTGTTGATGTTCACTTCGTATGCAACGTGCAAATGTTGGTTTTGGATTTATTTTGCAGTTTTGAGTTACTCGTAGGATGCTTATATAGAATATATAACAGGTGGATTTTAGTTTTCTTCATTAGTGTTTAAACACCTAGTTTGTCATTCATAAGATGTTTCTACTGGTATTCTTCCTAGACCTCCTTGGTATTTAGCTGATCTAATTCAAACTAAATTGTTTTTGGCTGTAGTCTGTGACCATAACCGAGTTCCTGAAGCCTGTTGATGGTGAAAAGTTCTATACCCCCGGTGGGCGTGGTAGAGGCCGTGGGCGAGGCTCAAGAGGTGGCTTCAATAATGGAAGCAACAGAACCAATGTGGCAGCACCGTCCATCGAAGATCCAGGGCAGTTCCCTTCATTGAGTGCTAAGTGA

mRNA sequence

ATGGCAACCATGAACCCTTTTGATCTCTTGGTCGACGACGACAACGAGGACCCAAATCAGCTCGCTTCTGCTCAGCGGTCCGCTCCGGCGCTGCCCTCCAAGAAGGCCCCTGCTCCGGCTGCTCAGCCTGCCAAACCGGCTAAGCTTCCTTCCAAGCCTCTCCCTCCCGCTCAGGCTGTAAGAGAGGCAAAGAGTGAAAATAGCCGTGGTCGTGGGGGTGGACGTGGCTATGGACGAGGACGTGGTGGTGGTGGAGGATTCAACAGAGACTCAGCCAATAATGAAAATGGTGGTAAGAATGGATTCTCTGATCGTTACCCGCCAACTGAGGAAGGTGAAAAGGGGGCTGAAAAGCGTGGTTATGGTGCTCCCCGTGGCTCTTTCCGTGGTCCTCGTCGGGGAGGCTTCAGTAATGGTGAGGCAGAAGAAGGGGAAAGACCCCGAAGATTATATGAACGACGCAGTGGAACTGGACGCGGAAATGAGTTTAAGCGTGAAGGAGCTGGTCGTAGGAACTGGGGATCTCCTGGTGATGAAATTGCCCCGGATGTGGAAGTGCCTGTTGCTGAAAATGAGAAGATTGTTGCTCCAGAGCAACAGCTTGGAGAGGATGTGGTCGTTGATGATAACAACAAAGAGGAGGCTGTGAAGGAACCAGAAGAGAAGGAGGCTGAGGACAAGGAAATGACCCTCAAGGAGTATGAGAAGCTCCGTGAAGAGAGTAGGAAAATGCTCGCAAGGACTGAGTTGAGGAAGGCTGAGATGGATGAGGAATTAGAGAACATGCAGCAGCTTTCCAGCAAGAAAAGCAATGATGAAATCTTTGCTAAATTGGGTGCTGATAAGGATAAGCGCAAAGAAATTGCTGACAAGGAGGAGAAAGCTAAGAAGTCTGTGACCATAACCGAGTTCCTGAAGCCTGTTGATGGTGAAAAGTTCTATACCCCCGGTGGGCGTGGTAGAGGCCGTGGGCGAGGCTCAAGAGGTGGCTTCAATAATGGAAGCAACAGAACCAATGTGGCAGCACCGTCCATCGAAGATCCAGGGCAGTTCCCTTCATTGAGTGCTAAGTGA

Coding sequence (CDS)

ATGGCAACCATGAACCCTTTTGATCTCTTGGTCGACGACGACAACGAGGACCCAAATCAGCTCGCTTCTGCTCAGCGGTCCGCTCCGGCGCTGCCCTCCAAGAAGGCCCCTGCTCCGGCTGCTCAGCCTGCCAAACCGGCTAAGCTTCCTTCCAAGCCTCTCCCTCCCGCTCAGGCTGTAAGAGAGGCAAAGAGTGAAAATAGCCGTGGTCGTGGGGGTGGACGTGGCTATGGACGAGGACGTGGTGGTGGTGGAGGATTCAACAGAGACTCAGCCAATAATGAAAATGGTGGTAAGAATGGATTCTCTGATCGTTACCCGCCAACTGAGGAAGGTGAAAAGGGGGCTGAAAAGCGTGGTTATGGTGCTCCCCGTGGCTCTTTCCGTGGTCCTCGTCGGGGAGGCTTCAGTAATGGTGAGGCAGAAGAAGGGGAAAGACCCCGAAGATTATATGAACGACGCAGTGGAACTGGACGCGGAAATGAGTTTAAGCGTGAAGGAGCTGGTCGTAGGAACTGGGGATCTCCTGGTGATGAAATTGCCCCGGATGTGGAAGTGCCTGTTGCTGAAAATGAGAAGATTGTTGCTCCAGAGCAACAGCTTGGAGAGGATGTGGTCGTTGATGATAACAACAAAGAGGAGGCTGTGAAGGAACCAGAAGAGAAGGAGGCTGAGGACAAGGAAATGACCCTCAAGGAGTATGAGAAGCTCCGTGAAGAGAGTAGGAAAATGCTCGCAAGGACTGAGTTGAGGAAGGCTGAGATGGATGAGGAATTAGAGAACATGCAGCAGCTTTCCAGCAAGAAAAGCAATGATGAAATCTTTGCTAAATTGGGTGCTGATAAGGATAAGCGCAAAGAAATTGCTGACAAGGAGGAGAAAGCTAAGAAGTCTGTGACCATAACCGAGTTCCTGAAGCCTGTTGATGGTGAAAAGTTCTATACCCCCGGTGGGCGTGGTAGAGGCCGTGGGCGAGGCTCAAGAGGTGGCTTCAATAATGGAAGCAACAGAACCAATGTGGCAGCACCGTCCATCGAAGATCCAGGGCAGTTCCCTTCATTGAGTGCTAAGTGA

Protein sequence

MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAVREAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKRGYGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDEIAPDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLREESRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKSVTITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNGSNRTNVAAPSIEDPGQFPSLSAK

Homology

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BLAST of Lag0032966 vs. NCBI nr
Match: KAG6606205.1 (RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 576.2 bits (1484), Expect = 1.9e-160
Identity = 323/362 (89.23%), Postives = 339/362 (93.65%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPA PSKKAPAP AQPAK AKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAP-AQPAKAAKLPSKPLPPAQAV 60

Query: 61  REAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKRG 120
           REAK+ENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY PTEEGEK AEKRG
Sbjct: 61  REAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRG 120

Query: 121 YGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDEI 180
           YGA  GSFRGPRRGGFSNGE EEGERPRRLYERRSGTGRGNE+KR+GAGRRNWG+PG+EI
Sbjct: 121 YGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEI 180

Query: 181 APDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLREE 240
           +PDVE PVAENEKI+A EQQLGED  V+DNNKEEAVKEPEEKE EDKEMTLKEYEKLREE
Sbjct: 181 SPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREE 240

Query: 241 SRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKSVT 300
           SRK+LA+TELRKAE+DEELENMQQ+SSKK+NDEIFAKLGADKDKRK+ ADKEEKAKKSVT
Sbjct: 241 SRKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVT 300

Query: 301 ITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFN-----NGSNRTNVAAPSIEDPGQFPSLS 358
           ITEFLKP  GEK+Y+PGGRGRGRGRGSRGG N     NGSNR NVAAPSIEDPGQFPSLS
Sbjct: 301 ITEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLS 360

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BLAST of Lag0032966 vs. NCBI nr
Match: XP_004148350.1 (RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN60476.1 hypothetical protein Csa_001243 [Cucumis sativus])

HSP 1 Score: 573.2 bits (1476), Expect = 1.6e-159
Identity = 319/359 (88.86%), Postives = 338/359 (94.15%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAP AQPAKPAKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPVLPSKKAPAP-AQPAKPAKLPSKPLPPAQAV 60

Query: 61  REAKSENSR-GRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKR 120
           RE+K++N R GRGGGRG+GRGRGGGGGFNRDSANNENGG+NGFSDRY   E+GEK AE+R
Sbjct: 61  RESKNDNGRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDGEKAAERR 120

Query: 121 GYGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDE 180
           GYGAPRGSFRGPRR GFSNGEAEEGERPRR+YERRSGTGRGNEFKREGAGRRNWG+PGDE
Sbjct: 121 GYGAPRGSFRGPRRAGFSNGEAEEGERPRRVYERRSGTGRGNEFKREGAGRRNWGAPGDE 180

Query: 181 IAPDVEVPVAENEKIVAPEQQLGEDVVVDDNNK-EEAVKEPEEKEAEDKEMTLKEYEKLR 240
            APDVE PVAENEK VAPEQQLGED VVDDNNK EEAVKEPEEKE EDKEMTLKEYEKLR
Sbjct: 181 NAPDVEEPVAENEKNVAPEQQLGEDGVVDDNNKTEEAVKEPEEKEPEDKEMTLKEYEKLR 240

Query: 241 EESRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKS 300
           EESRK+LA+TE+RKAE+DEELENMQQLSSKK+NDEIFAKLG DKDKRK+ ADKEE+AKKS
Sbjct: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKS 300

Query: 301 VTITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNGSNRTNVAAPSIEDPGQFPSLSAK 358
           VTITEFLKP +GE++Y PGGRGRGRGRGSRGGFNNGSNR NVAAPSIEDPGQFPSLSAK
Sbjct: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358

[Close]

BLAST of Lag0032966 vs. NCBI nr
Match: KAG7036150.1 (RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 572.8 bits (1475), Expect = 2.1e-159
Identity = 321/362 (88.67%), Postives = 338/362 (93.37%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPA PSKKAPAP AQPAK AKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAP-AQPAKAAKLPSKPLPPAQAV 60

Query: 61  REAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKRG 120
           REAK+ENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY PTEEGEK AEKRG
Sbjct: 61  REAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRG 120

Query: 121 YGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDEI 180
           YGA  GSFRGPRRGGFSNGE EEGERPRRLYERRSGTGRGNE+KR+GAGRRNWG+PG+EI
Sbjct: 121 YGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEI 180

Query: 181 APDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLREE 240
           +PDVE PVAENEKI+A EQQLGED  V+DNNKEEAVKEPEEKE EDKEMTLKEYEKLREE
Sbjct: 181 SPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREE 240

Query: 241 SRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKSVT 300
           SRK+LA+TELRKAE+DEELENMQQ+SSKK+NDEIFAKLGADKDKRK+ ADKEEKAKKSVT
Sbjct: 241 SRKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVT 300

Query: 301 ITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFN-----NGSNRTNVAAPSIEDPGQFPSLS 358
           ITEFLKP  GE++Y+PGGRGRGRGRGSRGG N     NGSNR NVAAPSIEDPGQFP LS
Sbjct: 301 ITEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPLLS 360

[Close]

BLAST of Lag0032966 vs. NCBI nr
Match: XP_022958346.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata])

HSP 1 Score: 572.8 bits (1475), Expect = 2.1e-159
Identity = 322/362 (88.95%), Postives = 338/362 (93.37%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPA PSKKAPAP AQPAK AKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAP-AQPAKAAKLPSKPLPPAQAV 60

Query: 61  REAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKRG 120
           REAK+ENSRGRGGGRGYGRGRGGGG FNRDSANNENGGKNGFSDRY PTEEGEK AEKRG
Sbjct: 61  REAKNENSRGRGGGRGYGRGRGGGGVFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRG 120

Query: 121 YGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDEI 180
           YGA  GSFRGPRRGGFSNGE EEGERPRRLYERRSGTGRGNE+KR+GAGRRNWG+PG+EI
Sbjct: 121 YGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEI 180

Query: 181 APDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLREE 240
           +PDVE PVAENEKI+A EQQLGED  V+DNNKEEAVKEPEEKE EDKEMTLKEYEKLREE
Sbjct: 181 SPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREE 240

Query: 241 SRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKSVT 300
           SRK+LA+TELRKAE+DEELENMQQ+SSKKSNDEIFAKLGADKDKRK+ ADKEEKAKKSVT
Sbjct: 241 SRKLLAKTELRKAEIDEELENMQQISSKKSNDEIFAKLGADKDKRKDNADKEEKAKKSVT 300

Query: 301 ITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNG-----SNRTNVAAPSIEDPGQFPSLS 358
           ITEFLKP  GE++Y+PGGRGRGRGRGSRGG NNG     SNR NVAAPSIEDPGQFPSLS
Sbjct: 301 ITEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGSVSNRMNVAAPSIEDPGQFPSLS 360

[Close]

BLAST of Lag0032966 vs. NCBI nr
Match: XP_022995186.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima])

HSP 1 Score: 571.2 bits (1471), Expect = 6.1e-159
Identity = 320/362 (88.40%), Postives = 339/362 (93.65%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPF+LLVDDDNEDPNQLASAQRSAPA PSKKAPAP AQPAK AKLPSKPLPPAQAV
Sbjct: 1   MATMNPFNLLVDDDNEDPNQLASAQRSAPAPPSKKAPAP-AQPAKAAKLPSKPLPPAQAV 60

Query: 61  REAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKRG 120
           REAK+ENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY PTEEGEK AEKRG
Sbjct: 61  REAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRG 120

Query: 121 YGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDEI 180
           YGA  GSFRGPRRGGFSNGE EEGERPRRLYERRSGTGRGNE+KR+GAGRRNWG+PG+EI
Sbjct: 121 YGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEI 180

Query: 181 APDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLREE 240
           +PDVE PVAENEKI+A EQQLGED  V++NNKEEAVKEPEEKE EDKEMTLKEYEKLREE
Sbjct: 181 SPDVEEPVAENEKIIASEQQLGEDGDVNNNNKEEAVKEPEEKEPEDKEMTLKEYEKLREE 240

Query: 241 SRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKSVT 300
           SRK+LA+TELRKAE+DEELENMQQ+SSKK+NDEIFAKLGADKDKRK+ ADKEEKAKKSVT
Sbjct: 241 SRKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVT 300

Query: 301 ITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFN-----NGSNRTNVAAPSIEDPGQFPSLS 358
           ITEFLKP  GE++Y+PGGRGRGRGRGSRGG N     NGSNR NVAAPSIEDPGQFPSLS
Sbjct: 301 ITEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLS 360

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BLAST of Lag0032966 vs. ExPASy Swiss-Prot
Match: O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 3.8e-71
Identity = 207/374 (55.35%), Postives = 252/374 (67.38%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPA-KLPSKPLPPAQA 60
           MAT+NPFDLL DDD EDP+QLA A        SKK+   ++ PAK A KLPSKPLPPAQA
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKID--KSKKSGQVSSLPAKSAPKLPSKPLPPAQA 60

Query: 61  VREAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY-PPTEEGE---KG 120
           VREA+S+  RG GG  G+ RGR   GG+NRD       G NG+S  Y  P+ EG+     
Sbjct: 61  VREARSDAPRGGGGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSS 120

Query: 121 AEKR-GYGAPRGSFRGP-------RRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREG 180
            E+R G GAPRGSFRG        RRGGFSN E  +GERPRR +ERRSGTGRG++FKR+G
Sbjct: 121 YERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDG 180

Query: 181 AGRRNWGSPGDEIAPDVE-VPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAED 240
           +GR NWG+PG+EIA + E V   E EK V  E+   +DV  D N ++  V   EEKE ED
Sbjct: 181 SGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTVV---EEKEPED 240

Query: 241 KEMTLKEYEKLREESRKMLARTELRKAEMDEEL-ENMQQLSSKKSNDEIFAKLGADKDKR 300
           KEMTL EYEK+ EE +K L      + ++D ++ E+MQQLS+KKSNDEIF KLG+DKDKR
Sbjct: 241 KEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKR 300

Query: 301 KEIADKEEKAKKSVTITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNGSN--RTNVAAP 358
           K+  DKEEKAKK+V+I EFLKP +G  +Y  G  GRGRG   RGG ++G +    N AAP
Sbjct: 301 KD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAAP 355

[Close]

BLAST of Lag0032966 vs. ExPASy Swiss-Prot
Match: Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.7e-69
Identity = 178/301 (59.14%), Postives = 221/301 (73.42%), Query Frame = 0


Query: 70  GRGGGRGYGRGR--GGGGGFNRDSANNEN--GGKNGFSDRYPPTEEGEKG--AEKR-GYG 129
           GRGG RG GRGR  G G GFN++SA++EN  G  NGFS RY   E+GE G  +E+R GYG
Sbjct: 4   GRGGPRGGGRGRGPGRGRGFNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGGYG 63

Query: 130 APRGSFRGPRRGGFSNGEAE--EGERPRRLYERRSGTGRGNEF-KREGAGRRNWGSPGDE 189
            PRG F G RRGGF+NG+A   EGERPRR+++RRSGTGRGNE+ KREG+GR NWG+P D+
Sbjct: 64  GPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPADD 123

Query: 190 IAPDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLRE 249
           IA + EVPV + EKIV  E++ G++   +D NK+    EPEEKE E+KEMTL+EYEKL E
Sbjct: 124 IAQETEVPVNDGEKIVEAEKEAGQE-EAEDTNKDSTAAEPEEKEPEEKEMTLEEYEKLME 183

Query: 250 ESRKML--ARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKK 309
           E RK L   + E RK  +D+ELE+MQ LS+KK++DEIF KLG++K+KRKE     EKA+K
Sbjct: 184 EKRKALLALKPEERKVNLDKELESMQLLSNKKNDDEIFIKLGSEKEKRKEAV---EKARK 243

Query: 310 SVTITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNG-SNRTNVAAPSIEDPGQFPSLSA 358
           + +I EFLKP +GE +   GGRGRG GRG RGGF  G     + +APSIED GQFPSL A
Sbjct: 244 TQSINEFLKPAEGENYSRRGGRGRGPGRG-RGGFGGGVGGNKSFSAPSIEDVGQFPSLVA 299

[Close]

BLAST of Lag0032966 vs. ExPASy Swiss-Prot
Match: Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-56
Identity = 185/368 (50.27%), Postives = 232/368 (63.04%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAA-QPAKPAKLPSKPLPPAQA 60
           MA++NPFDLL  DD EDP+QL      A AL  K   A AA QP K AK P+KP PP+QA
Sbjct: 1   MASLNPFDLL-GDDAEDPSQL------AVALSQKVEKAAAAVQPPKAAKFPTKPAPPSQA 60

Query: 61  VREAKSENSRGRG--GGR-GYGRGRGGGGGFNRDSANNE-NGGKNGFSDRYPPTEEGEKG 120
           VRE+++    GRG  GGR G+ RGR G GG+NRD+ NN+  G +NGFS  Y    E   G
Sbjct: 61  VRESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADG 120

Query: 121 AEKRG-YGAPR--GSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRN 180
           A + G  G  R  G   GPRRGG +NGE+ + ERP R Y+R S TG G   KR G GR N
Sbjct: 121 ASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGN 180

Query: 181 WGSPGDEIAPDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAED---KEM 240
           WG+  D+I P  E P  E EK    E+Q GED    +  KE   +E  +KEAE+   +EM
Sbjct: 181 WGTTEDDIPPTSEEPTTEVEKSPVAEKQGGED-ETPEAKKELTAEEKAQKEAEEAEAREM 240

Query: 241 TLKEYEKLREESRKMLARTELRKAEMDEEL-ENMQQLSSKKSND-EIFAKLGADKDKRKE 300
           TL+EYEK+ EE +K L  T++ + ++D ++ E+MQQLS+KK+ D EIF KLG+DK+KRK 
Sbjct: 241 TLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK- 300

Query: 301 IADKEEKAKKSVTITEFLKPVDGEKFYTPGGRGRGR-GRGSRGGFNNGSNRTNVAAPSIE 355
             D  EKAKKS++I EFLKP DG+++   GG  RGR GRG RG   N       AAP+I 
Sbjct: 301 --DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIG 356

[Close]

BLAST of Lag0032966 vs. ExPASy Swiss-Prot
Match: O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.0e-55
Identity = 176/375 (46.93%), Postives = 232/375 (61.87%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MA++NPFDLL DDD EDP+Q+ +++         K  AP  Q AK  K+P+KP PP+QAV
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAP-VQTAKSGKMPTKPPPPSQAV 60

Query: 61  REAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNEN-GGKNGFSDRYPPTEEGEKGAEKR 120
           REA++    GRG GRG   GRGG GG NRDS NN+    +NG+   Y  +EEG+ GA + 
Sbjct: 61  REARNAPGGGRGAGRGGSYGRGGRGGNNRDSRNNDGPANENGYGGGYRRSEEGD-GARR- 120

Query: 121 GYGAPRGSFRGPRRGGFSN-GEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGD 180
             G P G +RG RRG +SN G++ + ERPR+ Y+R S T  GNE KR+GAGR NWG+  D
Sbjct: 121 --GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQD 180

Query: 181 EIAPDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLR 240
           +I P  E   A  +K +  E+Q GE    D  N+  A  E  E++ EDKEMTL+EYEK+ 
Sbjct: 181 DITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPA--EKAEEKPEDKEMTLEEYEKVL 240

Query: 241 EESRKMLARTELRKAEMD-EELENMQQLSSKKS-NDEIFAKLGADKDKRKEIADKEEKAK 300
           EE +K L  T++ + ++D +  E MQQLSSKKS NDE+F KLG +KDKR  I ++EEK +
Sbjct: 241 EEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKTR 300

Query: 301 KSVTITEFLKPVDGEKFYTPGG--RGRGRGRGSR-------------GGFN--NGSNRTN 355
           KS++I EFLKP DG+ +Y P G  +G   GRG R             GG N  +G     
Sbjct: 301 KSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAAQ 358

[Close]

BLAST of Lag0032966 vs. ExPASy TrEMBL
Match: A0A0A0LKF6 (HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914560 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 7.8e-160
Identity = 319/359 (88.86%), Postives = 338/359 (94.15%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAP AQPAKPAKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPVLPSKKAPAP-AQPAKPAKLPSKPLPPAQAV 60

Query: 61  REAKSENSR-GRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKR 120
           RE+K++N R GRGGGRG+GRGRGGGGGFNRDSANNENGG+NGFSDRY   E+GEK AE+R
Sbjct: 61  RESKNDNGRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDGEKAAERR 120

Query: 121 GYGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDE 180
           GYGAPRGSFRGPRR GFSNGEAEEGERPRR+YERRSGTGRGNEFKREGAGRRNWG+PGDE
Sbjct: 121 GYGAPRGSFRGPRRAGFSNGEAEEGERPRRVYERRSGTGRGNEFKREGAGRRNWGAPGDE 180

Query: 181 IAPDVEVPVAENEKIVAPEQQLGEDVVVDDNNK-EEAVKEPEEKEAEDKEMTLKEYEKLR 240
            APDVE PVAENEK VAPEQQLGED VVDDNNK EEAVKEPEEKE EDKEMTLKEYEKLR
Sbjct: 181 NAPDVEEPVAENEKNVAPEQQLGEDGVVDDNNKTEEAVKEPEEKEPEDKEMTLKEYEKLR 240

Query: 241 EESRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKS 300
           EESRK+LA+TE+RKAE+DEELENMQQLSSKK+NDEIFAKLG DKDKRK+ ADKEE+AKKS
Sbjct: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKS 300

Query: 301 VTITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNGSNRTNVAAPSIEDPGQFPSLSAK 358
           VTITEFLKP +GE++Y PGGRGRGRGRGSRGGFNNGSNR NVAAPSIEDPGQFPSLSAK
Sbjct: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358

[Close]

BLAST of Lag0032966 vs. ExPASy TrEMBL
Match: A0A6J1H1U3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111459594 PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 1.0e-159
Identity = 322/362 (88.95%), Postives = 338/362 (93.37%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPA PSKKAPAP AQPAK AKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAP-AQPAKAAKLPSKPLPPAQAV 60

Query: 61  REAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKRG 120
           REAK+ENSRGRGGGRGYGRGRGGGG FNRDSANNENGGKNGFSDRY PTEEGEK AEKRG
Sbjct: 61  REAKNENSRGRGGGRGYGRGRGGGGVFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRG 120

Query: 121 YGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDEI 180
           YGA  GSFRGPRRGGFSNGE EEGERPRRLYERRSGTGRGNE+KR+GAGRRNWG+PG+EI
Sbjct: 121 YGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEI 180

Query: 181 APDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLREE 240
           +PDVE PVAENEKI+A EQQLGED  V+DNNKEEAVKEPEEKE EDKEMTLKEYEKLREE
Sbjct: 181 SPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREE 240

Query: 241 SRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKSVT 300
           SRK+LA+TELRKAE+DEELENMQQ+SSKKSNDEIFAKLGADKDKRK+ ADKEEKAKKSVT
Sbjct: 241 SRKLLAKTELRKAEIDEELENMQQISSKKSNDEIFAKLGADKDKRKDNADKEEKAKKSVT 300

Query: 301 ITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNG-----SNRTNVAAPSIEDPGQFPSLS 358
           ITEFLKP  GE++Y+PGGRGRGRGRGSRGG NNG     SNR NVAAPSIEDPGQFPSLS
Sbjct: 301 ITEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGSVSNRMNVAAPSIEDPGQFPSLS 360

[Close]

BLAST of Lag0032966 vs. ExPASy TrEMBL
Match: A0A6J1K1A6 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111490806 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 3.0e-159
Identity = 320/362 (88.40%), Postives = 339/362 (93.65%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPF+LLVDDDNEDPNQLASAQRSAPA PSKKAPAP AQPAK AKLPSKPLPPAQAV
Sbjct: 1   MATMNPFNLLVDDDNEDPNQLASAQRSAPAPPSKKAPAP-AQPAKAAKLPSKPLPPAQAV 60

Query: 61  REAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKRG 120
           REAK+ENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY PTEEGEK AEKRG
Sbjct: 61  REAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRG 120

Query: 121 YGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDEI 180
           YGA  GSFRGPRRGGFSNGE EEGERPRRLYERRSGTGRGNE+KR+GAGRRNWG+PG+EI
Sbjct: 121 YGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEI 180

Query: 181 APDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLREE 240
           +PDVE PVAENEKI+A EQQLGED  V++NNKEEAVKEPEEKE EDKEMTLKEYEKLREE
Sbjct: 181 SPDVEEPVAENEKIIASEQQLGEDGDVNNNNKEEAVKEPEEKEPEDKEMTLKEYEKLREE 240

Query: 241 SRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKSVT 300
           SRK+LA+TELRKAE+DEELENMQQ+SSKK+NDEIFAKLGADKDKRK+ ADKEEKAKKSVT
Sbjct: 241 SRKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVT 300

Query: 301 ITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFN-----NGSNRTNVAAPSIEDPGQFPSLS 358
           ITEFLKP  GE++Y+PGGRGRGRGRGSRGG N     NGSNR NVAAPSIEDPGQFPSLS
Sbjct: 301 ITEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLS 360

[Close]

BLAST of Lag0032966 vs. ExPASy TrEMBL
Match: A0A1S3CPW2 (plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103503456 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 5.0e-159
Identity = 318/359 (88.58%), Postives = 339/359 (94.43%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAP AQPAKPAKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAP-AQPAKPAKLPSKPLPPAQAV 60

Query: 61  REAKSENSR-GRGGGRGYGRGR-GGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEK 120
           RE+K+ENSR GRGGGRG+GRGR GGGGGFNRDSANNEN G+NGFSDRY   E+GEK AE+
Sbjct: 61  RESKNENSRGGRGGGRGFGRGRGGGGGGFNRDSANNENSGRNGFSDRYQTPEDGEKAAER 120

Query: 121 RGYGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGD 180
           RGYGAPRGSFRGPRRGGFSNGEAEEGERPRR+YERRSGTGRGNEFKR+GAGRRNWG+PGD
Sbjct: 121 RGYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGD 180

Query: 181 EIAPDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLR 240
           E APDVE PVAENEK VAPEQQLGED V D+N  EEAVKEPEEKE EDKEMTLKEYEKLR
Sbjct: 181 ENAPDVEEPVAENEKNVAPEQQLGEDGVDDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240

Query: 241 EESRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKS 300
           EESRK+LA+TE+RKAE+DEELENMQQLSSKK+NDEIFAKLG DKDKRK++ADKEE+AKKS
Sbjct: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEERAKKS 300

Query: 301 VTITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNGSNRTNVAAPSIEDPGQFPSLSAK 358
           VTITEFLKP +GE++Y PGGRGRGRGRGSRGGFNNGSNR NVAAPSIEDPGQFPSLSAK
Sbjct: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358

[Close]

BLAST of Lag0032966 vs. ExPASy TrEMBL
Match: A0A6J1EUM3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111438060 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.8e-155
Identity = 317/363 (87.33%), Postives = 335/363 (92.29%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQL SAQRSAPA+PSKKAPA  AQPAKPA LPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPA-LAQPAKPANLPSKPLPPAQAV 60

Query: 61  REAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYPPTEEGEKGAEKRG 120
           RE+K+ENSRGRGGGRG+GRGR GGGGFNRDSANNENGGKNGFSDRY   E+GEK  E+RG
Sbjct: 61  RESKNENSRGRGGGRGFGRGR-GGGGFNRDSANNENGGKNGFSDRYQAPEDGEKATERRG 120

Query: 121 YGAPRGSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDEI 180
           YG PRGSFRGPRRGGFSNGE EEGE+PRR+YERRSGTGRGNEFKR+GAGRRNWG+PGDEI
Sbjct: 121 YGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEI 180

Query: 181 APDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLREE 240
           APDVE PVAENEK VAPEQQLGED VVDDNNKEEAVKE EEKE EDKEMTLKEYEKLREE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDSVVDDNNKEEAVKEAEEKEPEDKEMTLKEYEKLREE 240

Query: 241 SRKMLARTELRKAEMDEELENMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKSVT 300
           SRK+LA+TELRKAE+DEELENMQQLS KKSNDEIFAKLG+DKDKRK+IADKEEKAKKSVT
Sbjct: 241 SRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKKSVT 300

Query: 301 ITEFLKPVDGEKFYTPGGRGRGRGR-GSRGGFNNGSNRTNV----AAPSIEDPGQFPSL- 358
           ITEFLKP +GE++Y PGGRGRGRGR GSRGGFNNGSNR NV    AAPSIED GQFPSL 
Sbjct: 301 ITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAPSIEDQGQFPSLM 360

[Close]

BLAST of Lag0032966 vs. TAIR 10
Match: AT4G16830.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 270.0 bits (689), Expect = 2.7e-72
Identity = 207/374 (55.35%), Postives = 252/374 (67.38%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPA-KLPSKPLPPAQA 60
           MAT+NPFDLL DDD EDP+QLA A        SKK+   ++ PAK A KLPSKPLPPAQA
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKID--KSKKSGQVSSLPAKSAPKLPSKPLPPAQA 60

Query: 61  VREAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY-PPTEEGE---KG 120
           VREA+S+  RG GG  G+ RGR   GG+NRD       G NG+S  Y  P+ EG+     
Sbjct: 61  VREARSDAPRGGGGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSS 120

Query: 121 AEKR-GYGAPRGSFRGP-------RRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREG 180
            E+R G GAPRGSFRG        RRGGFSN E  +GERPRR +ERRSGTGRG++FKR+G
Sbjct: 121 YERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDG 180

Query: 181 AGRRNWGSPGDEIAPDVE-VPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAED 240
           +GR NWG+PG+EIA + E V   E EK V  E+   +DV  D N ++  V   EEKE ED
Sbjct: 181 SGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTVV---EEKEPED 240

Query: 241 KEMTLKEYEKLREESRKMLARTELRKAEMDEEL-ENMQQLSSKKSNDEIFAKLGADKDKR 300
           KEMTL EYEK+ EE +K L      + ++D ++ E+MQQLS+KKSNDEIF KLG+DKDKR
Sbjct: 241 KEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKR 300

Query: 301 KEIADKEEKAKKSVTITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNGSN--RTNVAAP 358
           K+  DKEEKAKK+V+I EFLKP +G  +Y  G  GRGRG   RGG ++G +    N AAP
Sbjct: 301 KD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAAP 355

[Close]

BLAST of Lag0032966 vs. TAIR 10
Match: AT4G16830.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 224.9 bits (572), Expect = 1.0e-58
Identity = 169/314 (53.82%), Postives = 209/314 (66.56%), Query Frame = 0


Query: 60  VREAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY-PPTEEGE---KG 119
           VREA+S+  RG GG  G+ RGR   GG+NRD       G NG+S  Y  P+ EG+     
Sbjct: 48  VREARSDAPRGGGGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSS 107

Query: 120 AEKR-GYGAPRGSFRGP-------RRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREG 179
            E+R G GAPRGSFRG        RRGGFSN E  +GERPRR +ERRSGTGRG++FKR+G
Sbjct: 108 YERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDG 167

Query: 180 AGRRNWGSPGDEIAPDVE-VPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAED 239
           +GR NWG+PG+EIA + E V   E EK V  E+   +DV  D N ++  V   EEKE ED
Sbjct: 168 SGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTVV---EEKEPED 227

Query: 240 KEMTLKEYEKLREESRKMLARTELRKAEMDEEL-ENMQQLSSKKSNDEIFAKLGADKDKR 299
           KEMTL EYEK+ EE +K L      + ++D ++ E+MQQLS+KKSNDEIF KLG+DKDKR
Sbjct: 228 KEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKR 287

Query: 300 KEIADKEEKAKKSVTITEFLKPVDGEKFYTPGGRGRGRGRGSRGGFNNGSN--RTNVAAP 358
           K+  DKEEKAKK+V+I EFLKP +G  +Y  G  GRGRG   RGG ++G +    N AAP
Sbjct: 288 KD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAAP 345

[Close]

BLAST of Lag0032966 vs. TAIR 10
Match: AT5G47210.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 221.9 bits (564), Expect = 8.4e-58
Identity = 185/368 (50.27%), Postives = 232/368 (63.04%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAA-QPAKPAKLPSKPLPPAQA 60
           MA++NPFDLL  DD EDP+QL      A AL  K   A AA QP K AK P+KP PP+QA
Sbjct: 1   MASLNPFDLL-GDDAEDPSQL------AVALSQKVEKAAAAVQPPKAAKFPTKPAPPSQA 60

Query: 61  VREAKSENSRGRG--GGR-GYGRGRGGGGGFNRDSANNE-NGGKNGFSDRYPPTEEGEKG 120
           VRE+++    GRG  GGR G+ RGR G GG+NRD+ NN+  G +NGFS  Y    E   G
Sbjct: 61  VRESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADG 120

Query: 121 AEKRG-YGAPR--GSFRGPRRGGFSNGEAEEGERPRRLYERRSGTGRGNEFKREGAGRRN 180
           A + G  G  R  G   GPRRGG +NGE+ + ERP R Y+R S TG G   KR G GR N
Sbjct: 121 ASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGN 180

Query: 181 WGSPGDEIAPDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAED---KEM 240
           WG+  D+I P  E P  E EK    E+Q GED    +  KE   +E  +KEAE+   +EM
Sbjct: 181 WGTTEDDIPPTSEEPTTEVEKSPVAEKQGGED-ETPEAKKELTAEEKAQKEAEEAEAREM 240

Query: 241 TLKEYEKLREESRKMLARTELRKAEMDEEL-ENMQQLSSKKSND-EIFAKLGADKDKRKE 300
           TL+EYEK+ EE +K L  T++ + ++D ++ E+MQQLS+KK+ D EIF KLG+DK+KRK 
Sbjct: 241 TLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK- 300

Query: 301 IADKEEKAKKSVTITEFLKPVDGEKFYTPGGRGRGR-GRGSRGGFNNGSNRTNVAAPSIE 355
             D  EKAKKS++I EFLKP DG+++   GG  RGR GRG RG   N       AAP+I 
Sbjct: 301 --DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIG 356

[Close]

BLAST of Lag0032966 vs. TAIR 10
Match: AT4G17520.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 218.8 bits (556), Expect = 7.2e-57
Identity = 176/375 (46.93%), Postives = 232/375 (61.87%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAAQPAKPAKLPSKPLPPAQAV 60
           MA++NPFDLL DDD EDP+Q+ +++         K  AP  Q AK  K+P+KP PP+QAV
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAP-VQTAKSGKMPTKPPPPSQAV 60

Query: 61  REAKSENSRGRGGGRGYGRGRGGGGGFNRDSANNEN-GGKNGFSDRYPPTEEGEKGAEKR 120
           REA++    GRG GRG   GRGG GG NRDS NN+    +NG+   Y  +EEG+ GA + 
Sbjct: 61  REARNAPGGGRGAGRGGSYGRGGRGGNNRDSRNNDGPANENGYGGGYRRSEEGD-GARR- 120

Query: 121 GYGAPRGSFRGPRRGGFSN-GEAEEGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGD 180
             G P G +RG RRG +SN G++ + ERPR+ Y+R S T  GNE KR+GAGR NWG+  D
Sbjct: 121 --GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQD 180

Query: 181 EIAPDVEVPVAENEKIVAPEQQLGEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLR 240
           +I P  E   A  +K +  E+Q GE    D  N+  A  E  E++ EDKEMTL+EYEK+ 
Sbjct: 181 DITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPA--EKAEEKPEDKEMTLEEYEKVL 240

Query: 241 EESRKMLARTELRKAEMD-EELENMQQLSSKKS-NDEIFAKLGADKDKRKEIADKEEKAK 300
           EE +K L  T++ + ++D +  E MQQLSSKKS NDE+F KLG +KDKR  I ++EEK +
Sbjct: 241 EEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKTR 300

Query: 301 KSVTITEFLKPVDGEKFYTPGG--RGRGRGRGSR-------------GGFN--NGSNRTN 355
           KS++I EFLKP DG+ +Y P G  +G   GRG R             GG N  +G     
Sbjct: 301 KSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAAQ 358

[Close]

BLAST of Lag0032966 vs. TAIR 10
Match: AT4G16830.2 (Hyaluronan / mRNA binding family )

HSP 1 Score: 186.4 bits (472), Expect = 3.9e-47
Identity = 123/219 (56.16%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 143 EGERPRRLYERRSGTGRGNEFKREGAGRRNWGSPGDEIAPDVE-VPVAENEKIVAPEQQL 202
           +GERPRR +ERRSGTGRG++FKR+G+GR NWG+PG+EIA + E V   E EK V  E+  
Sbjct: 53  DGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPA 112

Query: 203 GEDVVVDDNNKEEAVKEPEEKEAEDKEMTLKEYEKLREESRKMLARTELRKAEMDEEL-E 262
            +DV  D N ++  V   EEKE EDKEMTL EYEK+ EE +K L      + ++D ++ E
Sbjct: 113 VDDVAADANKEDTVV---EEKEPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFE 172

Query: 263 NMQQLSSKKSNDEIFAKLGADKDKRKEIADKEEKAKKSVTITEFLKPVDGEKFYTPGGRG 322
           +MQQLS+KKSNDEIF KLG+DKDKRK+  DKEEKAKK+V+I EFLKP +G  +Y  G  G
Sbjct: 173 SMQQLSNKKSNDEIFIKLGSDKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGG 232

Query: 323 RGRGRGSRGGFNNGSN--RTNVAAPSIEDPGQFPSLSAK 358
           RGRG   RGG ++G +    N AAP+I D  QFPSL  K
Sbjct: 233 RGRGGRGRGGVSSGESGGYRNEAAPAIGDAAQFPSLGGK 265

The following BLAST results are available for this feature:

BLAST of Lag0032966 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606205.1	1.9e-160	89.23	RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp...	[more]
XP_004148350.1	1.6e-159	88.86	RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN60476.1 hypothet...	[more]
KAG7036150.1	2.1e-159	88.67	RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022958346.1	2.1e-159	88.95	RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata]	[more]
XP_022995186.1	6.1e-159	88.40	RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima]	[more]

BLAST of Lag0032966 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23523	3.8e-71	55.35	RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9SQ56	2.7e-69	59.14	RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409...	[more]
Q9LVT8	1.2e-56	50.27	RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
O23593	1.0e-55	46.93	RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]

BLAST of Lag0032966 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKF6	7.8e-160	88.86	HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914...	[more]
A0A6J1H1U3	1.0e-159	88.95	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1K1A6	3.0e-159	88.40	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3CPW2	5.0e-159	88.58	plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=36...	[more]
A0A6J1EUM3	5.8e-155	87.33	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Lag0032966 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16830.1	2.7e-72	55.35	Hyaluronan / mRNA binding family	[more]
AT4G16830.3	1.0e-58	53.82	Hyaluronan / mRNA binding family	[more]
AT5G47210.1	8.4e-58	50.27	Hyaluronan / mRNA binding family	[more]
AT4G17520.1	7.2e-57	46.93	Hyaluronan / mRNA binding family	[more]
AT4G16830.2	3.9e-47	56.16	Hyaluronan / mRNA binding family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 220..272
None	No IPR available	GENE3D	6.10.140.1040		coord: 145..257 e-value: 6.9E-6 score: 28.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..172
None	No IPR available	PANTHER	PTHR12299:SF64	PLASMINOGEN ACTIVATOR INHIBITOR 1 RNA-BINDING PROTEIN-LIKE	coord: 1..357
IPR006861	Hyaluronan/mRNA-binding protein	SMART	SM01233	HABP4_PAI_RBP1_2	coord: 147..256 e-value: 6.8E-34 score: 128.6
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 147..254 e-value: 9.3E-24 score: 84.5
IPR019084	Stm1-like, N-terminal	PFAM	PF09598	Stm1_N	coord: 1..74 e-value: 1.3E-20 score: 74.0
IPR039764	RNA binding protein HABP4/SERBP1	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 1..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032966.1	Lag0032966.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding