Lag0032790 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032790
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr11: 37564822 .. 37568827 (+)
RNA-Seq Expression	Lag0032790
Synteny	Lag0032790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCGGGTTAGTTTCTAATAGGTCCCTAAGTTTCAAAATTGAACAATCAAATCCCTACTGTTTTGAAAATGCTTCTATTGAGTCCATGTATCGTTAATTATTTTAACGGTACTGACATGACACATTAAAATAATAAAATATTGATTTTTTAAATTTAAAATAAATAAATAATAATAATAATATAATCAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTCTCTCCTCTTCCCTTACCCCCTTTCATTCCTCTCTCCCTCCTTTCCCTTGCCGTCGACGCCGCCGCTGTTACCACTTCATCTTCAAACAAAAACCCACCCCCACCCCTCTCACCTCTCATCTTCTTCTACTCTTCTCCTTTCCGGCGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTAGATCTGGAAGATGAAAGGATTTGGGGAAGAAATGGGTTTTAGGTTGAAGAAGATGAAAGGGTGGGCGAAGGCCGAGGCGCTGTCGAGGCCGGAGGTGGGTTCGTCGAGGAACAGAACGACGGGGTCGTGGAGGAGGCTGAGGCCGATGGAGACGCGCCGCCGTTCGCCGCCGGAGAGACCGGAGATGAGACAGGTGTTGGCGACGTGGGAAAGGCAGAGGTCGATGAGCAGGGAGTCGACGATGGTCGGGATTTGGGATTTTTTGGGGAGGAGGAGGCGGGCGGCAAAGGCGAAGGTAAATTTAAAACAAAAAAATTCTCTCCCATTGTCAATGTCGGAGTTGAAACGGCGGCGATGGAAGTTTGTTCGCCCGCGACGGAAGTTTAAACATAGGAGACAAGAAGTGTTTGCCGTGACGGAAAGAAAAAAGAAGAAAAATGAAGAAGAGAAGAGGGGCACGGGTGAAGGGATGGGAAGAGAGAGAAATGGTTTTTTTTTTAATTATTTTTATTTAAAAAGAAATATTATTATTTATTATTATTATAATATTATTTAAATTTAAAAAATCAATATTTTATTATTTTAACGTGCCACGTCAGCACCGTTAAAATAATTAACAGTCCAAAGACTCAATAGAAGCATTTTCAAAACAGTGGAGATTTGATTGTTCAATTTTAAAATCTAGGGACCTATTAGAAACTAACTCGAAACATTTGGTATTTTACCCTAAAATAGGTTTGTAATACAAAGTTGATTAGATTTTAAAGAAACACGGCTAATGTTTTTTTTTTTTTTTTTTTTTGGTTAAATTTAAGAGATTTATTCCTCTTTTGTGTATTAATCAAGTTTAATTTTGTATAATGTCTGACTTTTGTAAAGTCAGTAAGTTCTCAGAAAATTTTATGTTGACTTATTTTTTTAATTAAAATTAATAGATGAATATGGCGGAATTTGAACCTAGGATACTTCTCAAAAAAAAAAAAGTTGAACCTAGGATAAAAATTGTAATACATTTTTAAGTCAATTAATTTGATTAAATTTTAAGTCTATGGTAAAATTGATATACCTTACTAAATTTAAAAGTATATACTTATTTTTTTCTAAAGCAAATAGTAATCGATTAGACTTAGTTTGAGATTGCTATTAGTGTTGGAATAACTATTTTCATCCGAGCTTTTAAAAAGAAATTAAGCCGAATAGAAAGTAAATTAGTATTAGATAAATGTTAATTTAAACATGAAAAGGCAAGTTAAATATTAGATATAGGCATATTATTTAAAAAAATATTAGATATAGGCATATTATATCGATATTTAATTTAAAATTTTTTATAATGTAATTGAATAAAATGTTATTCAATTTAAATTACAATAATATTATGTGTACTCAAAATTAAACTTTAGTCGAACATAGTATAATTTGTGAGCCTCTTAAGTTTCTCTTGAGATCTCTAGCTTGTTTGAGTGTTCGACCTCTTCCTTAGGTAGCCTTGATAGCTTAGGTCTGCCTTATGAGCTCTATAAATCAGTTGTCATCCCGATAGATGTTAGGTTTAGTAGGGAAGTCTAAATGTTGCAATCTAGTTTGTGAGCTCTGCCTAGGTAAAAATGAAAAGATTTGAGAATAAGAGAAAAAAAAAGAATAGAAAAGAAAAGAAAGCCATGAAAAAGAACTAATGGAAAAGAAAAGTTAAAAAAGGAAAGGAAAGTATTAGTAAGTCTTGCCAAATATGAGTGGTAAAATAAGGTGTGAGCATGTATTGGATAGCTAAAAATATATTCCCTTGCTTTCCCATTATGAAAGCATGCTTGCAAGAGTTATAAAGGTTTTGGGGTAAAAATAGTTGCTTGTAGTGTGATCAGATAGGCCAATCAAGGGTTAAACTCAGGTTATGGGTCTCTACATTGTAGTGTGAAAACTAGTACCCCGCCTTTTAGAGTGTGGTAAAATAAGTTTAAAGTTTATCTCTGGCAGACCCTAGGTATGAGTTTGCATCCTCTTTTGTGTCTTTTAGCTTCTAGGTGAGACCTTAATGCCAGTGTAGGGGGAAGATAGATGGAGGAGTTTATAAGCCTTTCTTGGGCTAGTAGGGGTTGCTTTAGGTGAGGCCTTTCACTTGCAGTGCGAGAGGTTCGTGGAGTATTCTTGAACTATCTCTTAGTCTGTTAGCAAGCTTTAATTTTCTCTCAGGCATAAGAATTAGCATTTGGCGTGCAGAGACTCATGTGTGATAAATCTCAGCTACTGAGTCTCTGCCTCCCATATTAAATATATAATTATAGGCTTGATTGAGGTCTATCAGGTTGCAGGGGTATTTAGTTAGGGTATTTTGGCGTGTGGATGGGGTCAGTGTGTTTCCCTTTTCTGTGCTGACTTGCCGTAATTTGATGGTATCCTTGCAGCTTGGAATACGAGGACAGGAGCGAACTTAAGGTGATAACAAGGCGGGCCAGAGCAGAACTACTTGCTAGATTGGTTTTAGGATGGTCTTGTGAAATGAGTTTACTAGCGATGTATCTTAGTCCATTTGGATGTTTGCTTAGTTTTTGGTCCTATTCTTTTAACGATTGGAATGTATAAAAAAAATGTTATTCCAGTTAAAAAAAAAGAATAAAGAAAGAAAGAAAAAAATAAAAGGTATTTGAATTAAACAAGAGGGCAGATATTTCAATAATAATAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAGGTTTCATTTTGGTCACTGAGTTTTCAAACTCGAAAATTTAGTTCCTAAGGTTTGGATTTTGTTTCATTTTGGTCCATCAATCCATTTTTTCATTAACTCTTAACGGTTTGCTGACGTGACACTTATTTTTTTATAATTTTTTTTTCAATTTTAAAAATAAAATAATCATAAAATAATTTTTAAAAATATATATATTTTATTTTAATTTTCCTTCCCAATTTTCCCCCTCTTTTCTTTTTCTTCCTTTTCACAACCACCACTTTCTTCTTCTTTCTACTCAACCACCTGACCAGCATCCGTTGCCGCCGATCGCCAGCGACCACTGCTCACCGCCGGCCGTCGGGCGACAACATTTTTTTTTCTTCTTCTTTCCTCCATTATGTTTTTTTTCCTTCTCTTCTCTTTCTTTCTTCTTTTCTTCCTCTTTCTCTTCGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTTCATCCTCCATCGTCGACGCCGAAAACGAAGACGCAAATAGCAACCACAACCCACGTATTCGCGACCAATTTCATCTTTCTCCAGTCCGACCTTCGCCCGAATCTCCAACCCTCCTCCGTTGCCGGCGTCAGATCTGGACAGTTGCGCGTCTTCTCCTTCCGTCAGCGAGCAACACCATAACAACAACCCACGCACGACCTCTGTGAATCCGCGACCCCGTTGGCGATCTGCAAATCCAGATATGACCTTCGCGAGGGAGGTCCAGATTCGAATCTCCGTCCACATCTGCGTCCCCAATGGCGACACCCCGGTAGCAACCACGACCGGCGAATCCGCGATCAGTTTCGTCCCTCTCCATCCAGATTTGCTAGTTCAGTCTTCCGACGCAAAACAGAGGGGATGA

mRNA sequence

ATGTTTCGGGTTGAAGAAGATGAAAGGGTGGGCGAAGGCCGAGGCGCTGTCGAGGCCGGAGGTGGGTTCGTCGAGGAACAGAACGACGGGGTCGTGGAGGAGGCTGAGGCCGATGGAGACGCGCCGCCGTTCGCCGCCGGAGAGACCGGAGATGAGACAGGTGTTGGCGACGTGGGAAAGGCAGAGGTCGATGAGCAGGGAGTCGACGATGGTCGGGATTTGGGATTTTTTGGGGAGGAGGAGGCGGGCGGCAAAGGCGAAGGTAGCCTTGATAGCTTAGGTCTGCCTTATGAGCTCTATAAATCAGTTGTCATCCCGATAGATGTTAGCTTGGAATACGAGGACAGGAGCGAACTTAAGGTGATAACAAGGCGGGCCAGAGCAGAACTACTTGCTAGATTGGTTTTAGGATGGTCTTGTGAAATGAGTTTACTAGCGATTCCGACCTTCGCCCGAATCTCCAACCCTCCTCCGTTGCCGGCGTCAGATCTGGACAGTTGCGCGTCTTCTCCTTCCGTCAGCGAGCAACACCATAACAACAACCCACGCACGACCTCTGTGAATCCGCGACCCCGTTGGCGATCTGCAAATCCAGATATGACCTTCGCGAGGGAGGTCCAGATTCGAATCTCCGTCCACATCTGCGTCCCCAATGGCGACACCCCGGTAGCAACCACGACCGGCGAATCCGCGATCAGTTTCGTCCCTCTCCATCCAGATTTGCTAGTTCAGTCTTCCGACGCAAAACAGAGGGGATGA

Coding sequence (CDS)

ATGTTTCGGGTTGAAGAAGATGAAAGGGTGGGCGAAGGCCGAGGCGCTGTCGAGGCCGGAGGTGGGTTCGTCGAGGAACAGAACGACGGGGTCGTGGAGGAGGCTGAGGCCGATGGAGACGCGCCGCCGTTCGCCGCCGGAGAGACCGGAGATGAGACAGGTGTTGGCGACGTGGGAAAGGCAGAGGTCGATGAGCAGGGAGTCGACGATGGTCGGGATTTGGGATTTTTTGGGGAGGAGGAGGCGGGCGGCAAAGGCGAAGGTAGCCTTGATAGCTTAGGTCTGCCTTATGAGCTCTATAAATCAGTTGTCATCCCGATAGATGTTAGCTTGGAATACGAGGACAGGAGCGAACTTAAGGTGATAACAAGGCGGGCCAGAGCAGAACTACTTGCTAGATTGGTTTTAGGATGGTCTTGTGAAATGAGTTTACTAGCGATTCCGACCTTCGCCCGAATCTCCAACCCTCCTCCGTTGCCGGCGTCAGATCTGGACAGTTGCGCGTCTTCTCCTTCCGTCAGCGAGCAACACCATAACAACAACCCACGCACGACCTCTGTGAATCCGCGACCCCGTTGGCGATCTGCAAATCCAGATATGACCTTCGCGAGGGAGGTCCAGATTCGAATCTCCGTCCACATCTGCGTCCCCAATGGCGACACCCCGGTAGCAACCACGACCGGCGAATCCGCGATCAGTTTCGTCCCTCTCCATCCAGATTTGCTAGTTCAGTCTTCCGACGCAAAACAGAGGGGATGA

Protein sequence

MFRVEEDERVGEGRGAVEAGGGFVEEQNDGVVEEAEADGDAPPFAAGETGDETGVGDVGKAEVDEQGVDDGRDLGFFGEEEAGGKGEGSLDSLGLPYELYKSVVIPIDVSLEYEDRSELKVITRRARAELLARLVLGWSCEMSLLAIPTFARISNPPPLPASDLDSCASSPSVSEQHHNNNPRTTSVNPRPRWRSANPDMTFAREVQIRISVHICVPNGDTPVATTTGESAISFVPLHPDLLVQSSDAKQRG

Homology

[Close]

BLAST of Lag0032790 vs. NCBI nr
Match: RDX84802.1 (hypothetical protein CR513_34091, partial [Mucuna pruriens])

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-07
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 12  EGRGAVEAGGGFVEEQNDGVVEEAEADGDAPPFAAGETGDETGVGDVGKAEVDEQGVDDG 71
           EG  AV+   GFV+EQ+ GV+EEA+AD D  PFAAGE   E GVG VG++E  E+G D G
Sbjct: 25  EGGSAVQTRSGFVQEQHGGVMEEAQADRDPSPFAAGEPTAEPGVGQVGESEFGEEGGDGG 84

Query: 72  RDLGFFGEEEAGGKGEG 89
            ++G  G EE GG+ EG
Sbjct: 85  AEVG-VGFEELGGEEEG 100

[Close]

BLAST of Lag0032790 vs. ExPASy TrEMBL
Match: A0A371G2M3 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_34091 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-07
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 12  EGRGAVEAGGGFVEEQNDGVVEEAEADGDAPPFAAGETGDETGVGDVGKAEVDEQGVDDG 71
           EG  AV+   GFV+EQ+ GV+EEA+AD D  PFAAGE   E GVG VG++E  E+G D G
Sbjct: 25  EGGSAVQTRSGFVQEQHGGVMEEAQADRDPSPFAAGEPTAEPGVGQVGESEFGEEGGDGG 84

Query: 72  RDLGFFGEEEAGGKGEG 89
            ++G  G EE GG+ EG
Sbjct: 85  AEVG-VGFEELGGEEEG 100

The following BLAST results are available for this feature:

BLAST of Lag0032790 vs. NCBI nr


Match Name	E-value	Identity	Description
RDX84802.1	2.6e-07	54.55	hypothetical protein CR513_34091, partial [Mucuna pruriens]	[more]

BLAST of Lag0032790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0032790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A371G2M3	1.3e-07	54.55	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_34091 P...	[more]

BLAST of Lag0032790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032790.1	Lag0032790.1	mRNA