Lag0032780 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032780
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr11: 37459112 .. 37465155 (-)
RNA-Seq Expression	Lag0032780
Synteny	Lag0032780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTTCTAAAGCTGCCTGCAAATCAAAGGAATGAAGGAAGGAAGGAAAGGAAGAGGAAGGGGTATGTGAAATTACGGAAATGGGTTTCTGTAACGAGGTTTGTCTTTCGTTTTCGCTTCGCATACCGCCGATTGGTTTTGATGAAATTACGGAAATGGGCTCGGCTGAGAAAAGTCTTTCCAAATGTGGGTTTTTTTTTTAATAAAATAAAATTGGCTGCTTTGGTTATAGTTCGGCAGCCGCCTGTGAAATTTCATGACCGAGTCACCGTTACTTTCGTAATTACGAATTATGTTTTAATATATAAAATCATCCCTAATCTTACTAATCCTACTTTTCAATATATATATATATATATATTAGGGGTGATACTCGGTTCGGTTTTGTCGGTTTTTGACCAAACCGCGAACCGAACCGATCCAATCGGTTTTACAAAACTCTCAACCGAACCAATGTCCAATATGGGACATGTCCAATGGTTCGGTTTTTCTTCGGTTCGGTTTGTCTAATGGATCGGTTTTCGGTTTTGGGCCCAATGTGGGCTTTTTTATTTTTTTTAAAATGTCTCATTTTCTCTTCTAATTTCAACTCATTTGTTTTTTTTTTTTTTGCCCAATTACCCATTGTACCCCATTTTTTCAATACAAACTTTAATTAATTAATTTATTAAATACAATTACTTAATTTTCTCAAACTAATCCATGAATAACAATTTTTAAATATTTGATTTTAAATAAATATACATAATAAAGATAAACATACAAATAATATCATAATTTATACTTTAAATTACATAGAAAAAAGAGATTTCCAACCAATTTAGGAAAAAAGTGAGATGTAGAGGCAAGATGCAAAAGGTTAGGATATTTTAAGTGGTATATATATAGTCGGTTCGGTTCGGTTTTTTAAATGAAAAACCGAACCGAACCGACAATTTTCGGTTTTCCCAAAAAACAAAACCGAGATGTCCATATTTTTTCAAAATAACCGAACCAAACCATTGGATCGGTTTGGTTCGGTTCGGTTTGTCGGTTTTTCAGTTTTTGCTTGCACCCCTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTGTTGACCATCAAATTTAGACCGACAGAACTCATCTGACCTTCACGTGATACCAGCAATGAATAAGACGTGGTTTGCAAGACAGAAAAAACCTGCACACTAATGTGGTGCTTGACACACTGCCTCCGATGTTTAAGTCAGAAAACTAAAGGAATGGAGCAAGGGAGTAAGAGAGCAAGAGGAGGAGTAGAGTTCATATAATAGTCTCAGGATCATTTCTTCAGTGACGAAAAAGGTTTTAAATACCTTTTCATGCCTTAGGGTTTCTAGACTTTCGGAGACGATTCAGGCTAAACTATGTGGAACCGGGACGGCCAGGGACCAAACAGAGGCACAGGGGCTAGGGCCAACCCATTTACATTGTCTCTCCTTCGGTATCTATCTCTCAACCGTGTCCTAGGTATTGCATTGTCCTACTTAGGCCTTGAATTCCAGAGTAGTCAGAATTACCTATAACATATATAACTTGATAATTCTAAATTTTGTTCCTATGTTCCTTATGTTGTTAATTTTTTTTTCTCTTTTGAAGGACGACAAAGGTAGAAGTATAGAGGTTTGAATATTTGACTCTAAGCAAACCAAGGATTAAAATGTACGGAAATGTCTAGGTCTCAATTTAATGGAAATGTCGATGGAAATATCAACAAAATGTCGATGTCGATGGATATTTCGGAAAAAAGATTCAAAACAAAAAATTAAAAAAAAATTAAATTAACAAATAATTGTTTTACACTTAAAATAAGTTAAAATACTTATGATAAATATTATCTCCACATTAGTTACATTTTGTTTACATTTTATCAAATTTTTTACAATATAATGGAAATGTCGATTCACCCTGCATGTTGATGTCAAATCCATGGAAATGTGGAAATGTCGATGGAAATGTCGACATGTCGTTGGAAATTTAATACATTGAAGCAAACAAGCTTGTGTTAATTATCATTGTTATGCTCATTTTAATATATTCTTAATATTTTGAAGACTCGTTAAAACTTGGTTTTTAGTTCAATAGTGAAGGATTTCAAAACTTGATTAAAGACATTGTGTCTTAACAATCCGGTTTAAAATTTGTTACCAAATGATTGAGGTGTCCTTGAATTATTGTTTTTTTTTTTCTTTTACAACCATTATTGTTTTATTAATACATCAAAGAAGAGGTAGATGATGCTAATGAAGAAAGATGGAAAAGAAATTAATTTTGTTAATGTAGGGGTCAAATTTTACTGTTCATGTTGAGTTTTATGCAAGTAATTTTTTGTAGGTTGAAATGATCAAATTGATAAATTTTAATATATTAAATTTTTTTCTTTGGTCAAAGTTGGCATAATTTAGTGGTAATTGACATAGACTTTCGACCAAGAAATTAAAAGTTTAAATTCTCACGTCAAAATGTTGTCGAACTAGAAAAAAGTTTTTTTTTTTTTGGCAAAAAAGAGTAAAGTTGGCAATTCAAAAGGAATAATGGAAAAATGAAAATGACTATAAATATAGATGATTTTATATATTTAGTGGGTTTTTTTTGTACGGATAACCCTCTAAAATAGGTGAAAATGATAAATGTCATACCTAATTTTCAATTTAAGGATATATCTCTTTTTGCGTGCGTAGCATCCTAGTAAAATTATACTATACCCTTCTCTCTCGTTACTTCCGCTCTAGCTTCTTGCTCTCTCTCCAATTTCCCACTTCAATTTCTCACTCTCTCTTTCCAATTTCTCACTCCATATCCTCGCTCTAGCTTCTTGCTCTCACTCCAATTTCTCACTTCAATCTCTCACCCTCTCTCCAACCTCTTGTTCTAGCTTCCCGTTCTCTCTCGCTACTTCAGCTCTCACTCTCCTTGTATGCTCTTTGGAGAGAGAAAATAAAGAGAGAGAAAAAGGGAGAATAAATCAATTGAGCGAGAAACAAAAGAGAAAAACGAGATGAGAGAAAAATGAGTCTTTTCATATAGAGAGTAAAATGATAATTTTACTAGGATGCTGACGTAAGTAAAAGAACATATAACCTTAAATTGAAAAAGTAGGACATTTTTCATTTTTCTCTTTTCAAATCGATATTTTATCTACTAAATTTTGATTAGATTGACACATTTTTTTAGTATCATCCCTACAAAAAATATATATATATATTTTGCCAGTTGAGCTAAGCTCTTGTTGGCCCTACAATATTTAGAAATGTGTAAATATATCCCTATGTAAGGAAAGTAATATCAATTAATTTCTCAAAGAAAAAAAAAAGTAATATAATTAATGGTATAAAGAAATAGTTGGTAATCCAAAAAAATACAATTGACTAAATCAAGATTATTCCATTTAAGTGGAACTATAAACATATTTGGTAAATTTTAGATTTAGAATGAGATAAACGTGCACCGATTGAGTTGGTTTAGAATTTATTCCGAATTAAATTTGAGTTCAATTATGTTATAGATGCAAAGATTTCTTACCACGTTGGTATTTTTAAATGAGGTAGGGAAATCTCGCACACTCTTGACTTGACCCTAAATCTAATCCTCTAAAATTATGTATAATTAGCTAATTAATATTACGTAATCATGAGTGTTTTAAGAGGATATGGTTATATAATCATCGATATATATTTTTCACTAGTCACGTGGTTTAAAAATAAATTCTATAACTATGTCATATAAATTTATAATATCATGACATTATGGTGTGATCTAACTAAAATTTAGGTTAAATTACCATGAATTTAGTTTCAATACTTTTTTTTTTTTTTTTTTTACTAAACCTCATCAATTGTTCTTGAACTATTTTTACCTGCTAAAAAAATTGGCTCATTTTTTCTTTATTCTTTAACTTCAGTTTTTTGGTCCTAATATTAAGGATCCGTTTGGAATACATTTTAATTTAAATATTTTTCAAGAATGCATTTAAAAAAATCTTTTGTATATAAATTGTTTAGAAGTTAAACACTCATATGTTTGGTTGCATTTCCTCATAGTGTTTTTATACACAAGTTATTTATATACTAAACACACTTTTTTAAAAAGTTGGTTTCAAGTGTTTCTTCAAAATAGTTTATTCATCAATCTCATTTTCTATTCAGTCAATTTTAGTGGTTGCCAAACACTAGAATTTTTTTCAAAATGATTTGTTTTTTCAAAATTAAACACTTGGAAAGTTAAACCAAACACACCCTGAATCGTGGACACAATTGCAAGCTGATTTTTTTAAAGGTTAAATTATCAAAAATACCTTTAAACTATGGAATTGGTTTCAATTATACTCTGAACTTTCAAACGTTTTATTTTAGCACTCGAAGTTTGAATTTTGTTTCTAAACGACCCTTGGAGACATTTTTCGTTAAATTTATGAATGAAAAATGATGTGTTTGTATGTGTTTTTATTGTTTTTTCCACATATATGTTCATATAAACAATGATACATGTGCAAACACGTCATTTTCCGTCCATAAATTTAACGAAAAATGCATTCAAGAGTTGTTTTGAAACAACATTCAAACTTCAAGGACTAAAATGAATTTTTTTAAAGTTTTGGGGGTTTTTTTTTTGATAATTTAACTTTTTAAAAAAAAGTTAAATAAATACAACTTAATTTTACTATTACGATATATATAAAAAAAATAACTCCATGTTGCTACGAGAAAAATCCTTAGTTATAAACATCTCTTGTTTTGTTTTTTTGTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTGCATGAAATTCCTTCCAATCTCATCTAATTTCTTAAAACAATACTCTTCAAAAATTATTTTTGAGGAAGGAAAAAAAAAAGAACCAACAACAAAAACAAAATAAAGTGCTAAAATCTTGGAATTTTAATTTGTTTGAAATAAAATAAAATATTGACATTAAATTAACATTTATTATTCAATGGTACAATAATAGAATAATGATTCAGCACATGAATTGAGCCACCGAGTTTTTTTTTTTGGTTGGTTACTTTTGAGAAGTGGGGTTATATTAGGTTGAAAATTAATCAATAATGCAAATTATGAGAAACAAAACTAAGGGTGTGTTTGGTTTAACTTTTCAAGTGTTTAATTTTGAAAAAAAAAATCATTTTGAAAAAAATTCTAGTGTTTGGCAACCACTAAAAATGACTTATTAGAAAATGAGATTGATAAATAAACCATTTTGAGAGAAACACTTGAAACCAACATTTTAAAAAAGACTTATTAGGTAAACAATAACTTGTGTAGAAAAACATTTGTGAGGAATTGCAACCAAACATATGAGTGTTTAAATTCGTTTATACAAAATGTTTTTTATAACCACTGTCCGACTCTCACCCACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGATGACAACATTATCTTCCTCAAAGCAAGCAAGAAGGAATTCGAAACTTCCAAAAAGGTGATCGGTTGGTACGAGAAAGCCTTGGGACAGGCCATCAACCTCAGCAAGTCCGCCTTTATGACCAACAAGAACATGAACCTCACAACCAGGGAGATGAGGGAGAACATTCTTGGGATCAAGTACATGAAATCTCTAGATCAATACTTGGGGATGCTTTCTCAGATTGGGCGAAATAAAGGTAGGGTATTCAGAAAAATTAAAGAAATGGTGGAGAGAATCCTTCAAGGATGGAAGGAAAAGCTCTTCTCCTTGGGAGGAAAAGAAGTGCTCATCAAATCAATTGCCCAAGCCATCCCGATGTATACACTGAGTTGTTTTCGTATCCCTAACTACATATGCAATGACATTGACAAGTTATGTGCCAAATTCTGGTGGGGTTCGATAGGAGATAAAGATAAACACCACTGGATGAGGTGGAAAAAGATGTGCACCAACAAGGACAGAGGAGGAATGGGTTTTAAAGAGCTCACAACCTTCAACCAAGCCATGCTCGCGAAACAAAGCTGA

mRNA sequence

ATGTTTCTTCTAAAGCTGCCTGCAAATCAAAGGAATGAAGGAAGGAAGGAAAGGAAGAGGAAGGGGTATGTGAAATTACGGAAATGGGTTTCTGTAACGAGGGTTTCTAGACTTTCGGAGACGATTCAGGCTAAACTATGTGGAACCGGGACGGCCAGGGACCAAACAGAGGCACAGGGGCTAGGGCCAACCCATTTACATTGTCTCTCCTTCGATGACAACATTATCTTCCTCAAAGCAAGCAAGAAGGAATTCGAAACTTCCAAAAAGGTGATCGGTTGGTACGAGAAAGCCTTGGGACAGGCCATCAACCTCAGCAAGTCCGCCTTTATGACCAACAAGAACATGAACCTCACAACCAGGGAGATGAGGGAGAACATTCTTGGGATCAAGTACATGAAATCTCTAGATCAATACTTGGGGATGCTTTCTCAGATTGGGCGAAATAAAGGTAGGGTATTCAGAAAAATTAAAGAAATGGTGGAGAGAATCCTTCAAGGATGGAAGGAAAAGCTCTTCTCCTTGGGAGGAAAAGAAGTGCTCATCAAATCAATTGCCCAAGCCATCCCGATGTATACACTGAGTTGTTTTCGTATCCCTAACTACATATGCAATGACATTGACAAGTTATGTGCCAAATTCTGGTGGGGTTCGATAGGAGATAAAGATAAACACCACTGGATGAGGTGGAAAAAGATGTGCACCAACAAGGACAGAGGAGGAATGGGTTTTAAAGAGCTCACAACCTTCAACCAAGCCATGCTCGCGAAACAAAGCTGA

Coding sequence (CDS)

ATGTTTCTTCTAAAGCTGCCTGCAAATCAAAGGAATGAAGGAAGGAAGGAAAGGAAGAGGAAGGGGTATGTGAAATTACGGAAATGGGTTTCTGTAACGAGGGTTTCTAGACTTTCGGAGACGATTCAGGCTAAACTATGTGGAACCGGGACGGCCAGGGACCAAACAGAGGCACAGGGGCTAGGGCCAACCCATTTACATTGTCTCTCCTTCGATGACAACATTATCTTCCTCAAAGCAAGCAAGAAGGAATTCGAAACTTCCAAAAAGGTGATCGGTTGGTACGAGAAAGCCTTGGGACAGGCCATCAACCTCAGCAAGTCCGCCTTTATGACCAACAAGAACATGAACCTCACAACCAGGGAGATGAGGGAGAACATTCTTGGGATCAAGTACATGAAATCTCTAGATCAATACTTGGGGATGCTTTCTCAGATTGGGCGAAATAAAGGTAGGGTATTCAGAAAAATTAAAGAAATGGTGGAGAGAATCCTTCAAGGATGGAAGGAAAAGCTCTTCTCCTTGGGAGGAAAAGAAGTGCTCATCAAATCAATTGCCCAAGCCATCCCGATGTATACACTGAGTTGTTTTCGTATCCCTAACTACATATGCAATGACATTGACAAGTTATGTGCCAAATTCTGGTGGGGTTCGATAGGAGATAAAGATAAACACCACTGGATGAGGTGGAAAAAGATGTGCACCAACAAGGACAGAGGAGGAATGGGTTTTAAAGAGCTCACAACCTTCAACCAAGCCATGCTCGCGAAACAAAGCTGA

Protein sequence

MFLLKLPANQRNEGRKERKRKGYVKLRKWVSVTRVSRLSETIQAKLCGTGTARDQTEAQGLGPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQS

Homology

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BLAST of Lag0032780 vs. NCBI nr
Match: XP_018821989.1 (uncharacterized protein LOC108992010 [Juglans regia] >KAF5454504.1 hypothetical protein F2P56_024162 [Juglans regia])

HSP 1 Score: 199.9 bits (507), Expect = 2.7e-47
Identity = 90/196 (45.92%), Postives = 137/196 (69.90%), Query Frame = 0


Query: 63  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTRE 122
           P   H L  DD+++F KA+ +E +  + ++ +YE + GQ IN +K+  + + N+  +T+E
Sbjct: 130 PKISHLLFADDSLLFCKANMQENQRIQSLLNFYEASSGQVINRNKTGLVFSSNVQQSTKE 189

Query: 123 MRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLI 182
              N  G++  +  ++YLG+ S +GR+K R F +IK  V R LQGWKEK+ S GGKEVLI
Sbjct: 190 DLLNFWGVEQSQEYEKYLGLPSFVGRSKTRAFSEIKHRVWRKLQGWKEKVLSAGGKEVLI 249

Query: 183 KSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGM 242
           K++AQAIP Y++SCF++P+ +CN+++++ AKFWWG   ++ K HW+ WKKM   K+ GGM
Sbjct: 250 KAVAQAIPTYSMSCFKLPSSLCNELEQMMAKFWWGQKNEEKKIHWISWKKMSETKEEGGM 309

Query: 243 GFKELTTFNQAMLAKQ 259
           GFK+L  FN A+LAKQ
Sbjct: 310 GFKDLRIFNDALLAKQ 325

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BLAST of Lag0032780 vs. NCBI nr
Match: XP_023923430.1 (uncharacterized protein LOC112034844 [Quercus suber])

HSP 1 Score: 189.5 bits (480), Expect = 3.6e-44
Identity = 89/197 (45.18%), Postives = 130/197 (65.99%), Query Frame = 0


Query: 63  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTRE 122
           P   H L  DD+++F +++++E +   +++  YEK  GQ IN  K+    +++ +   RE
Sbjct: 502 PRLTHLLFADDSLLFCRSTRQECQRIIEILDTYEKCSGQKINKRKTTIFFSRSTSEDMRE 561

Query: 123 MRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLI 182
             + ILG+  +K  ++YLG+ S +GRNK   F  IKE V R +QGWKEKL S   +EVLI
Sbjct: 562 HIKLILGVPKIKQYEKYLGLPSLVGRNKKASFNYIKEKVWRKIQGWKEKLLSQARREVLI 621

Query: 183 KSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGM 242
           KS+ QAIP YT+SCF++P  +C++I+ L  KFWWG  GD+ K HW++W  +C  K  GGM
Sbjct: 622 KSVVQAIPTYTMSCFKLPLGLCSEIESLIRKFWWGQKGDRKKIHWVKWDTLCCPKSDGGM 681

Query: 243 GFKELTTFNQAMLAKQS 260
           GFK+L  FN A+LAKQ+
Sbjct: 682 GFKDLALFNDALLAKQA 698

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BLAST of Lag0032780 vs. NCBI nr
Match: XP_023899813.1 (uncharacterized protein LOC112011695 [Quercus suber])

HSP 1 Score: 188.7 bits (478), Expect = 6.2e-44
Identity = 95/200 (47.50%), Postives = 130/200 (65.00%), Query Frame = 0


Query: 62  GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTR 121
           GP   H    DD++IF KAS  + E  + V+  YEKA GQ +N +K++   + N   T +
Sbjct: 497 GPKLSHLFFADDSLIFCKASIAKCEALQGVLEAYEKASGQQLNRAKTSLFFSNN---TPK 556

Query: 122 EMRENI---LGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWKEKLFSLGGK 181
           E++E I    G + +K  ++YLG+ S +GRNK   F  IKE V R L GWKEKL S  GK
Sbjct: 557 EIQEEIKGRFGAQVIKQHEKYLGLPSLVGRNKRNTFNDIKEKVGRTLAGWKEKLLSKAGK 616

Query: 182 EVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKD 241
           EVLIK++AQAIP YT+SCF+IP+ +C+++  +   FWWG   +++K  W+RW+KMC  K 
Sbjct: 617 EVLIKAVAQAIPTYTMSCFKIPDSLCDELTTMIRNFWWGQRKEENKISWLRWEKMCEPKS 676

Query: 242 RGGMGFKELTTFNQAMLAKQ 259
            GGMGFK L  FN A+LAKQ
Sbjct: 677 NGGMGFKNLKFFNLALLAKQ 693

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BLAST of Lag0032780 vs. NCBI nr
Match: XP_021836918.1 (uncharacterized protein LOC110776679 [Spinacia oleracea])

HSP 1 Score: 188.3 bits (477), Expect = 8.1e-44
Identity = 92/196 (46.94%), Postives = 130/196 (66.33%), Query Frame = 0


Query: 63  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTRE 122
           P   H    DD+I+F KAS  E      +I  YE+A GQ++NL K+  + +K++N+  R+
Sbjct: 677 PKVSHLFFADDSILFAKASVGECSVIADIISKYERASGQSVNLDKTDVVFSKSVNVIRRQ 736

Query: 123 MRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLI 182
                LG+K ++  ++YLG+ + IG++K  VF  +KE + + LQGWKEKL S  GKEVLI
Sbjct: 737 EIVTTLGVKEVEKHEKYLGLPTIIGKSKKMVFASLKERIWKKLQGWKEKLLSRPGKEVLI 796

Query: 183 KSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGM 242
           K++AQAIP Y +S F+IP+ + ++I  LCA+FWWGS G   K HW  W+ MC  K  GGM
Sbjct: 797 KAVAQAIPTYMMSIFKIPDGLLDEIHALCARFWWGSDGTNRKMHWHSWETMCKPKAMGGM 856

Query: 243 GFKELTTFNQAMLAKQ 259
           GF++L  FNQA+LAKQ
Sbjct: 857 GFRDLKVFNQALLAKQ 872

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BLAST of Lag0032780 vs. NCBI nr
Match: XP_030940268.1 (uncharacterized protein LOC115965235 [Quercus lobata])

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-43
Identity = 88/197 (44.67%), Postives = 130/197 (65.99%), Query Frame = 0


Query: 62  GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTR 121
           GP   H L  DD++IF +AS  + +T + ++  YE A GQ IN  K+    + N    T+
Sbjct: 638 GPRISHLLFADDSLIFCRASLSDCQTIQSILQIYENASGQNINRGKTNLFFSSNTPAQTQ 697

Query: 122 EMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVL 181
           E  +N+L +  ++  +QYLG+ S +GR K R F  IKE + + L+GWKEKL S  G+E+L
Sbjct: 698 EDIKNLLAVPVIQRFEQYLGLPSFVGRAKKRSFSLIKERIWKKLKGWKEKLLSQAGREIL 757

Query: 182 IKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGG 241
           IK++ QAIP YT+SCF++P  + N+I+ L  KFWWG  G++ + HW+ W+K+C  K  GG
Sbjct: 758 IKAVVQAIPTYTMSCFKLPKGLINEIEGLIRKFWWGYRGEQKRIHWVSWEKLCLPKSDGG 817

Query: 242 MGFKELTTFNQAMLAKQ 259
           MGF+EL+ FN ++LAKQ
Sbjct: 818 MGFRELSCFNDSLLAKQ 834

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BLAST of Lag0032780 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-16
Identity = 36/104 (34.62%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 154 FRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAK 213
           F +I E V   + GW+EK  S  G+  L K++  ++P++++S   +P  I N +D+L   
Sbjct: 13  FGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRT 72

Query: 214 FWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAK 258
           F WGS  +K K H ++W K+C+ K  GG+G +   + N+A+++K
Sbjct: 73  FLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISK 116

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BLAST of Lag0032780 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.8e-15
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 188 AIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNK-DRGGMGFKE 247
           A+P+Y +SCFR+   +C  +     +FWW S  +K K  W+ W+K+C +K D GG+GF++
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 248 LTTFNQAMLAKQS 260
           L  FNQA+LAKQS
Sbjct: 62  LGWFNQALLAKQS 74

[Close]

BLAST of Lag0032780 vs. ExPASy TrEMBL
Match: A0A2I4ERH4 (uncharacterized protein LOC108992010 OS=Juglans regia OX=51240 GN=LOC108992010 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47
Identity = 90/196 (45.92%), Postives = 137/196 (69.90%), Query Frame = 0


Query: 63  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTRE 122
           P   H L  DD+++F KA+ +E +  + ++ +YE + GQ IN +K+  + + N+  +T+E
Sbjct: 130 PKISHLLFADDSLLFCKANMQENQRIQSLLNFYEASSGQVINRNKTGLVFSSNVQQSTKE 189

Query: 123 MRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLI 182
              N  G++  +  ++YLG+ S +GR+K R F +IK  V R LQGWKEK+ S GGKEVLI
Sbjct: 190 DLLNFWGVEQSQEYEKYLGLPSFVGRSKTRAFSEIKHRVWRKLQGWKEKVLSAGGKEVLI 249

Query: 183 KSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGM 242
           K++AQAIP Y++SCF++P+ +CN+++++ AKFWWG   ++ K HW+ WKKM   K+ GGM
Sbjct: 250 KAVAQAIPTYSMSCFKLPSSLCNELEQMMAKFWWGQKNEEKKIHWISWKKMSETKEEGGM 309

Query: 243 GFKELTTFNQAMLAKQ 259
           GFK+L  FN A+LAKQ
Sbjct: 310 GFKDLRIFNDALLAKQ 325

[Close]

BLAST of Lag0032780 vs. ExPASy TrEMBL
Match: A0A2N9HZ12 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45534 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 9.3e-46
Identity = 92/212 (43.40%), Postives = 135/212 (63.68%), Query Frame = 0


Query: 52  ARDQTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLS 111
           A +Q + QG+     GP   H    DD+++F KA+ K+    ++++  YE+ALGQ +N  
Sbjct: 688 ASEQGDLQGVALCRRGPRITHLFFADDSLLFTKATTKDCAKLQEILLMYERALGQQVNRD 747

Query: 112 KSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQ 171
           K+    +K     T+E   + LG+  +K  ++YLG+ S +G+N+   F ++KE V   L 
Sbjct: 748 KTTIFFSKATPTGTQETIRDALGVPIIKQYERYLGLPSFVGKNRTACFSQLKERVWSKLM 807

Query: 172 GWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHH 231
           GWKEKL S  G+EVLIKS+AQAIP YT+SCFR+PN +C D++ +  KFWWG   DK+K  
Sbjct: 808 GWKEKLLSQAGREVLIKSVAQAIPTYTMSCFRLPNRLCQDLEAMIRKFWWGHGPDKNKIC 867

Query: 232 WMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ 259
           W++W  +C  KD GGMGF++L  FN A+L KQ
Sbjct: 868 WVKWSSLCCQKDSGGMGFRDLRKFNDALLGKQ 899

[Close]

BLAST of Lag0032780 vs. ExPASy TrEMBL
Match: A0A2N9E7R2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2889 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 9.3e-46
Identity = 93/209 (44.50%), Postives = 133/209 (63.64%), Query Frame = 0


Query: 55  QTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSA 114
           Q E QG+     GP   H    DD+++F KA+ ++    + ++  YE+A GQ IN  K+ 
Sbjct: 396 QGEMQGVALCRRGPKITHLFFADDSLLFTKATTRDCAKLQVILQLYERASGQQINRDKTT 455

Query: 115 FMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWK 174
              +K     T+E  +N LG+  +K  ++YLG+ S +G+N+   F ++KE V   L GWK
Sbjct: 456 IFFSKATPSGTQEAIKNTLGVPIIKQYEKYLGLPSFVGKNRTACFTQLKERVWSKLMGWK 515

Query: 175 EKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMR 234
           EKL S  G+EVLIKS+AQAIP YT+SCFR+PN +C D++ +  KFWWG   DK+K  W++
Sbjct: 516 EKLLSQAGREVLIKSVAQAIPTYTMSCFRLPNRLCQDLESMIRKFWWGHGPDKNKICWIK 575

Query: 235 WKKMCTNKDRGGMGFKELTTFNQAMLAKQ 259
           W  +C  KD GGMGF+EL  FN+A+L KQ
Sbjct: 576 WSSLCCQKDSGGMGFRELKEFNEALLGKQ 604

[Close]

BLAST of Lag0032780 vs. ExPASy TrEMBL
Match: A0A2N9HXE3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44924 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45
Identity = 93/210 (44.29%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 55   QTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSA 114
            Q E QG+     GP   H    DD+++F KA+ ++    + ++  YE+A GQ IN  K+ 
Sbjct: 886  QGEMQGVALCRRGPKITHLFFADDSLLFTKATIRDCVKLQVILQLYERASGQQINRDKTT 945

Query: 115  FMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWK 174
               +K     T+E  +N LG+  +K  ++YLG+ S +G+N+   F ++KE V   L GWK
Sbjct: 946  IFFSKATPSGTQEAIKNTLGVPIIKQYEKYLGLPSFVGKNRTACFTQLKERVWSKLMGWK 1005

Query: 175  EKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMR 234
            EKL S  G+EVLIKS+AQAIP YT+SCFR+PN +C D++ +  KFWWG   DK+K  W++
Sbjct: 1006 EKLLSQAGREVLIKSVAQAIPTYTMSCFRLPNRLCQDLESMIRKFWWGHGPDKNKICWIK 1065

Query: 235  WKKMCTNKDRGGMGFKELTTFNQAMLAKQS 260
            W  +C  KD GGMGF+EL  FN+A+L KQ+
Sbjct: 1066 WSSLCCQKDSGGMGFRELKEFNEALLGKQA 1095

[Close]

BLAST of Lag0032780 vs. ExPASy TrEMBL
Match: A0A2N9IXD3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57918 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.7e-45
Identity = 91/212 (42.92%), Postives = 134/212 (63.21%), Query Frame = 0


Query: 52   ARDQTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLS 111
            A +Q E QG+     GP   H    DD+++F KA+ ++    ++++  YE+A GQ +N  
Sbjct: 2136 ASEQGELQGVALCRRGPRITHLFFADDSLLFTKATTRDCAKLQEILLLYERASGQQVNRD 2195

Query: 112  KSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQ 171
            K+    +K     T+   ++ LG+  +K  ++YLG+ S +G+N+   F ++KE V   L 
Sbjct: 2196 KTTIFFSKGTPTATQAAIKDTLGVPIIKQYEKYLGLPSFVGKNRTACFTQLKERVWSKLM 2255

Query: 172  GWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHH 231
            GWKEKL S  G+EVLIKS+AQAIP YT+SCFR+PN +C D++ +  KFWWG   DK+K  
Sbjct: 2256 GWKEKLLSQAGREVLIKSVAQAIPTYTMSCFRLPNRLCQDLESMIRKFWWGHGPDKNKIC 2315

Query: 232  WMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ 259
            W++W  +C  KD GGMGF+EL  FN A+L KQ
Sbjct: 2316 WIKWSSLCCQKDSGGMGFRELRKFNDALLGKQ 2347

[Close]

BLAST of Lag0032780 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.4e-16
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 188 AIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNK-DRGGMGFKE 247
           A+P+Y +SCFR+   +C  +     +FWW S  +K K  W+ W+K+C +K D GG+GF++
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 248 LTTFNQAMLAKQS 260
           L  FNQA+LAKQS
Sbjct: 62  LGWFNQALLAKQS 74

[Close]

BLAST of Lag0032780 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-12
Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 188 AIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKEL 247
           A+P YT++CF +P  +C  I  + A FWW +  +    HW  W  +   K  GG+GFK++
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 248 TTFNQAMLAKQ 259
             FN A+L KQ
Sbjct: 62  EAFNLALLGKQ 72

The following BLAST results are available for this feature:

BLAST of Lag0032780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_018821989.1	2.7e-47	45.92	uncharacterized protein LOC108992010 [Juglans regia] >KAF5454504.1 hypothetical ...	[more]
XP_023923430.1	3.6e-44	45.18	uncharacterized protein LOC112034844 [Quercus suber]	[more]
XP_023899813.1	6.2e-44	47.50	uncharacterized protein LOC112011695 [Quercus suber]	[more]
XP_021836918.1	8.1e-44	46.94	uncharacterized protein LOC110776679 [Spinacia oleracea]	[more]
XP_030940268.1	1.1e-43	44.67	uncharacterized protein LOC115965235 [Quercus lobata]	[more]

BLAST of Lag0032780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	1.9e-16	34.62	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P93295	4.8e-15	46.58	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lag0032780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I4ERH4	1.3e-47	45.92	uncharacterized protein LOC108992010 OS=Juglans regia OX=51240 GN=LOC108992010 P...	[more]
A0A2N9HZ12	9.3e-46	43.40	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45534 PE=4 SV=1	[more]
A0A2N9E7R2	9.3e-46	44.50	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9HXE3	1.6e-45	44.29	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44924 PE=4 SV=1	[more]
A0A2N9IXD3	2.7e-45	42.92	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57918 PE=4 SV=1	[more]

BLAST of Lag0032780 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00310.1	3.4e-16	46.58	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G29090.1	1.3e-12	39.44	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 62..255
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 62..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032780.1	Lag0032780.1	mRNA