Lag0032757 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032757
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DEA(D/H)-box RNA helicase family protein
Location	chr11: 37176603 .. 37177298 (+)
RNA-Seq Expression	Lag0032757
Synteny	Lag0032757

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCTCGTCGGCTCTTCTAGAGCGTCATCGGACCTTCTCGAGCCTTCTATGTAAGCTCATCTTCTCGCGCTCTATGGGCGGTGGTCCTCGTACCTTCCCCGGAGGCCTTAACAAGTGGCAATGGAAGCGAATGCATGAGAAAAGGGCTAAAGAGAAGGAGAAAAGGCTTCTCGAACAGGAGAAGCAGCTCTACCAGGCTCGAGTTCGTTCCGAAATACGCTCCAAGCTTGCTGGTGTACACGAAACTTCGAAGAATTCGGACCCTTCTACCAATTACTCCCCAATGAGCCCTAGCGAGCATATTAAAGCTCTAGCTGACAGGTTCATGAAAGAGAAAGCGATTGATTTGTGGAATGAAGATGATGGCCCGTTGAAGACTCCGCTACCGAGGCCCCAATTGCACGGAGGATCAAGAAGGTTTGCATCGAATGATCGGAGTGGATCGATTAGGTCGCCTATTGACGTCAAGAAGTTGTTAACAGATAAACATGATGGAATGGGAAAGCCTCAGAATATGGAATTTGGAAAGGTAAATGGTGGTAATTTGAAGAGTAGGAGCTATTCGGTGCAAAGTCGAAGGAGCTTCCGCAGGAATGAGAGTTCATCGAGTGACGATGACACGGATCATATCTCAGGTGTCGATTCAATTAAACCTTTTGCGCATAAGTTAGCACGTAGCCCTGATAAAATGTGA

mRNA sequence

ATGACCTCGTCGGCTCTTCTAGAGCGTCATCGGACCTTCTCGAGCCTTCTATGTAAGCTCATCTTCTCGCGCTCTATGGGCGGTGGTCCTCGTACCTTCCCCGGAGGCCTTAACAAGTGGCAATGGAAGCGAATGCATGAGAAAAGGGCTAAAGAGAAGGAGAAAAGGCTTCTCGAACAGGAGAAGCAGCTCTACCAGGCTCGAGTTCGTTCCGAAATACGCTCCAAGCTTGCTGGTGTACACGAAACTTCGAAGAATTCGGACCCTTCTACCAATTACTCCCCAATGAGCCCTAGCGAGCATATTAAAGCTCTAGCTGACAGGTTCATGAAAGAGAAAGCGATTGATTTGTGGAATGAAGATGATGGCCCGTTGAAGACTCCGCTACCGAGGCCCCAATTGCACGGAGGATCAAGAAGGTTTGCATCGAATGATCGGAGTGGATCGATTAGGTCGCCTATTGACGTCAAGAAGTTGTTAACAGATAAACATGATGGAATGGGAAAGCCTCAGAATATGGAATTTGGAAAGGTAAATGGTGGTAATTTGAAGAGTAGGAGCTATTCGGTGCAAAGTCGAAGGAGCTTCCGCAGGAATGAGAGTTCATCGAGTGACGATGACACGGATCATATCTCAGGTGTCGATTCAATTAAACCTTTTGCGCATAAGTTAGCACGTAGCCCTGATAAAATGTGA

Coding sequence (CDS)

ATGACCTCGTCGGCTCTTCTAGAGCGTCATCGGACCTTCTCGAGCCTTCTATGTAAGCTCATCTTCTCGCGCTCTATGGGCGGTGGTCCTCGTACCTTCCCCGGAGGCCTTAACAAGTGGCAATGGAAGCGAATGCATGAGAAAAGGGCTAAAGAGAAGGAGAAAAGGCTTCTCGAACAGGAGAAGCAGCTCTACCAGGCTCGAGTTCGTTCCGAAATACGCTCCAAGCTTGCTGGTGTACACGAAACTTCGAAGAATTCGGACCCTTCTACCAATTACTCCCCAATGAGCCCTAGCGAGCATATTAAAGCTCTAGCTGACAGGTTCATGAAAGAGAAAGCGATTGATTTGTGGAATGAAGATGATGGCCCGTTGAAGACTCCGCTACCGAGGCCCCAATTGCACGGAGGATCAAGAAGGTTTGCATCGAATGATCGGAGTGGATCGATTAGGTCGCCTATTGACGTCAAGAAGTTGTTAACAGATAAACATGATGGAATGGGAAAGCCTCAGAATATGGAATTTGGAAAGGTAAATGGTGGTAATTTGAAGAGTAGGAGCTATTCGGTGCAAAGTCGAAGGAGCTTCCGCAGGAATGAGAGTTCATCGAGTGACGATGACACGGATCATATCTCAGGTGTCGATTCAATTAAACCTTTTGCGCATAAGTTAGCACGTAGCCCTGATAAAATGTGA

Protein sequence

MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQEKQLYQARVRSEIRSKLAGVHETSKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNEDDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNGGNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDKM

Homology

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BLAST of Lag0032757 vs. NCBI nr
Match: XP_022928821.1 (probable DEAD-box ATP-dependent RNA helicase 48 [Cucurbita moschata])

HSP 1 Score: 388.7 bits (997), Expect = 3.6e-104
Identity = 198/230 (86.09%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           MTSS LLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRLLEQ
Sbjct: 1   MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNE 120
           EKQLYQARVRSEIRSKLAG +E SKNSDPST+YSPMSPSEHI ALA+RFMKE AIDLWNE
Sbjct: 61  EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120

Query: 121 DDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNG 180
           DDGPLKTP+PRPQLHGG RR ASNDRSG IRSPIDVKKLLT+KHDG+  PQNM  G +NG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFIRSPIDVKKLLTEKHDGLEGPQNMGLGNLNG 180

Query: 181 GNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
            NLK RSYSVQ+RRSFRRNESSSSDDDT   SGVDS+KPF HKLARS DK
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDK 230

[Close]

BLAST of Lag0032757 vs. NCBI nr
Match: KAG6579493.1 (putative DEAD-box ATP-dependent RNA helicase 48, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388.7 bits (997), Expect = 3.6e-104
Identity = 198/230 (86.09%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           MTSS LLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRLLEQ
Sbjct: 1   MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNE 120
           EKQLYQARVRSEIRSKLAG +E SKNSDPST+YSPMSPSEHI ALA+RFMKE AIDLWNE
Sbjct: 61  EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120

Query: 121 DDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNG 180
           DDGPLKTP+PRPQLHGG RR ASNDRSG IRSPIDVKKLLT+KHDG+  PQNM  G +NG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFIRSPIDVKKLLTEKHDGLEGPQNMGLGNLNG 180

Query: 181 GNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
            NLK RSYSVQ+RRSFRRNESSSSDDDT   SGVDS+KPF HKLARS DK
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDK 230

[Close]

BLAST of Lag0032757 vs. NCBI nr
Match: KAG7016956.1 (putative DEAD-box ATP-dependent RNA helicase 48 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.7 bits (997), Expect = 3.6e-104
Identity = 198/230 (86.09%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           MTSS LLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRLLEQ
Sbjct: 1   MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNE 120
           EKQLYQARVRSEIRSKLAG +E SKNSDPST+YSPMSPSEHI ALA+RFMKE AIDLWNE
Sbjct: 61  EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120

Query: 121 DDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNG 180
           DDGPLKTP+PRPQLHGG RR ASNDRSG IRSPIDVKKLLT+KHDG+  PQNM  G +NG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFIRSPIDVKKLLTEKHDGLEGPQNMGLGNLNG 180

Query: 181 GNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
            NLK RSYSVQ+RRSFRRNESSSSDDDT   SGVDS+KPF HKLARS DK
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDK 230

[Close]

BLAST of Lag0032757 vs. NCBI nr
Match: XP_023551235.1 (probable DEAD-box ATP-dependent RNA helicase 48 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.0 bits (990), Expect = 2.3e-103
Identity = 197/230 (85.65%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           MTSS LLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRLLEQ
Sbjct: 1   MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNE 120
           EKQLYQARVRSEIRSKLAG +E SKNSDPST+YSPMSPSEHI ALA+RFMKE AIDLWNE
Sbjct: 61  EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120

Query: 121 DDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNG 180
           DDGPLKTP+PRPQLHGG RR ASNDR G IRSPIDVKKLLT+K DG+  PQNM  GK+NG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRGGFIRSPIDVKKLLTEKQDGLEGPQNMGLGKLNG 180

Query: 181 GNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
            NLK RSYSVQ+RRSFRRNESSSSDDDT   SGVDS+KPF HKLARS DK
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDK 230

[Close]

BLAST of Lag0032757 vs. NCBI nr
Match: XP_023551234.1 (probable DEAD-box ATP-dependent RNA helicase 48 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.0 bits (990), Expect = 2.3e-103
Identity = 197/230 (85.65%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           MTSS LLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRLLEQ
Sbjct: 1   MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNE 120
           EKQLYQARVRSEIRSKLAG +E SKNSDPST+YSPMSPSEHI ALA+RFMKE AIDLWNE
Sbjct: 61  EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120

Query: 121 DDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNG 180
           DDGPLKTP+PRPQLHGG RR ASNDR G IRSPIDVKKLLT+K DG+  PQNM  GK+NG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRGGFIRSPIDVKKLLTEKQDGLEGPQNMGLGKLNG 180

Query: 181 GNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
            NLK RSYSVQ+RRSFRRNESSSSDDDT   SGVDS+KPF HKLARS DK
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDK 230

[Close]

BLAST of Lag0032757 vs. ExPASy Swiss-Prot
Match: Q9C8S9 (Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 GN=RH48 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.6e-44
Identity = 111/232 (47.84%), Postives = 147/232 (63.36%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           M S  L ER  + +  L   I SR+MGGGPRTFPGGLNKWQWKRMHEK+A+EKE +LL+Q
Sbjct: 1   MYSLILRERSGSITGSLWNRISSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHET-SKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWN 120
           EKQLY+AR+R+EIR+K+ G  ++  K +    ++ PMSP EHIK LADRFMK  A D WN
Sbjct: 61  EKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFWN 120

Query: 121 EDDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVN 180
           E+DGP+K      +   GSR   S+    +  SPIDV++L++   D MGK  N  FG   
Sbjct: 121 ENDGPVK------KSDQGSRS-GSDSIDSTSNSPIDVRRLVSATCDSMGK--NRVFGS-- 180

Query: 181 GGNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDKM 232
                 R +S  SR  F+RNESS  + D      +D++ PF+ K A + +K+
Sbjct: 181 ----SRRGFSSMSR--FKRNESSCDEGDDFDAKKLDTLSPFSPKFAGTKEKV 215

[Close]

BLAST of Lag0032757 vs. ExPASy Swiss-Prot
Match: O80792 (Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 GN=RH33 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.8e-43
Identity = 104/226 (46.02%), Postives = 146/226 (64.60%), Query Frame = 0


Query: 7   LERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQEKQLYQ 66
           L +  T    L   IFSR+MGGGPRTFPGGLNKWQWKRMHEK+A+EKE +LL+QEKQLY+
Sbjct: 57  LSKRITSERSLWNRIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYE 116

Query: 67  ARVRSEIRSKLAGVHET-SKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNEDDGPL 126
           AR+R+EIR+K+ G  ++  K +    ++ PMSP EHIK LADRFMK  A DLWN++DGP+
Sbjct: 117 ARIRTEIRAKMWGHPDSGEKTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGPV 176

Query: 127 KTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNGGNLKS 186
           K      +   GSR  + +  S    +PIDV++L++   D MGK + ++  +        
Sbjct: 177 K------KFDQGSRSCSDSIDS----TPIDVRRLVSATCDSMGKHRVLDSSR-------- 236

Query: 187 RSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDKM 232
           R +S  SR  F+RNESS  + D      +D++ PF+ K + + +K+
Sbjct: 237 RGFSSMSR--FKRNESSCDEGDDVDAKKLDTLSPFSPKFSGTKEKV 262

[Close]

BLAST of Lag0032757 vs. ExPASy Swiss-Prot
Match: Q6K7R9 (DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0826100 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 71/134 (52.99%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 26  MGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQEKQLYQARVRSEIRSKLAGVHETSK 85
           MGGGPRTFPGGL+KWQ KRMHEK A+ KE+ LL  EKQLY AR+RSEIR   A     + 
Sbjct: 1   MGGGPRTFPGGLSKWQHKRMHEKLARHKERGLLRHEKQLYLARLRSEIR---ASRLPAAG 60

Query: 86  NSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNEDDGPL-KTPLPRPQLHGGSRRFASN 145
            S P     P S   HI+ALADRF+   A DLWNEDDGP+ +   PRP      RR  S 
Sbjct: 61  ASPPDDGDGPTSSRAHIRALADRFLLPGAEDLWNEDDGPIHRADRPRP-----PRRIVSV 120

Query: 146 DRSGSIRSPIDVKK 159
             +G  R  +D  K
Sbjct: 121 GGNGGDRRKLDSTK 126

[Close]

BLAST of Lag0032757 vs. ExPASy TrEMBL
Match: A0A6J1ELD4 (probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucurbita moschata OX=3662 GN=LOC111435619 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 198/230 (86.09%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           MTSS LLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRLLEQ
Sbjct: 1   MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNE 120
           EKQLYQARVRSEIRSKLAG +E SKNSDPST+YSPMSPSEHI ALA+RFMKE AIDLWNE
Sbjct: 61  EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120

Query: 121 DDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNG 180
           DDGPLKTP+PRPQLHGG RR ASNDRSG IRSPIDVKKLLT+KHDG+  PQNM  G +NG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFIRSPIDVKKLLTEKHDGLEGPQNMGLGNLNG 180

Query: 181 GNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
            NLK RSYSVQ+RRSFRRNESSSSDDDT   SGVDS+KPF HKLARS DK
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDK 230

[Close]

BLAST of Lag0032757 vs. ExPASy TrEMBL
Match: A0A6J1HXQ2 (probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucurbita maxima OX=3661 GN=LOC111468985 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.7e-102
Identity = 193/230 (83.91%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           M SS LLERHR FSSLLCK +FSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRLLEQ
Sbjct: 1   MISSVLLERHRAFSSLLCKFMFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNE 120
           EKQLYQARVRSEIRSKLAG +E SKNSDPST+YSPMSP EHI ALA+RFMKE AIDLWNE
Sbjct: 61  EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPREHIHALANRFMKEGAIDLWNE 120

Query: 121 DDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNG 180
           DDGPLKTP+PRPQLHGG RR ASNDRSG +RSPIDVKKLLT+KHDG+  PQNM  GK+ G
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFLRSPIDVKKLLTEKHDGLEGPQNMGLGKLYG 180

Query: 181 GNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
            N K RSYSVQ+RRSFRRNESSSSDDDT+  SGVDS+KPF HKLARS DK
Sbjct: 181 DNFKGRSYSVQTRRSFRRNESSSSDDDTEFNSGVDSVKPFVHKLARSSDK 230

[Close]

BLAST of Lag0032757 vs. ExPASy TrEMBL
Match: A0A6J1DZQ8 (probable DEAD-box ATP-dependent RNA helicase 48 OS=Momordica charantia OX=3673 GN=LOC111026096 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.5e-98
Identity = 192/230 (83.48%), Postives = 204/230 (88.70%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           MTSS LL+RH+TFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLL+Q
Sbjct: 1   MTSSVLLQRHQTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLDQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNE 120
           EKQLYQARVRSEIR KLAGV +TS NSDPST+YSPMSPSEHIKALA+RFMKE A DLWNE
Sbjct: 61  EKQLYQARVRSEIRCKLAGVPDTSSNSDPSTSYSPMSPSEHIKALANRFMKEGAXDLWNE 120

Query: 121 DDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNG 180
           DDGPLKTPLPRP L GG  R       GSIRSP+DVKKLLT+K D +G P+NM FGKVNG
Sbjct: 121 DDGPLKTPLPRPHLRGGPGRI------GSIRSPVDVKKLLTEKDDVLGGPRNMGFGKVNG 180

Query: 181 GNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
            NLKSRSYSVQ RRSFRRNESSSSDDD ++ SGVDSIKPFAHKLA SPDK
Sbjct: 181 DNLKSRSYSVQIRRSFRRNESSSSDDDVNYNSGVDSIKPFAHKLAPSPDK 224

[Close]

BLAST of Lag0032757 vs. ExPASy TrEMBL
Match: A0A1S3AT64 (probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucumis melo OX=3656 GN=LOC103482724 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.1e-96
Identity = 189/231 (81.82%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           MTSS LL+RHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAK+KEKRLLEQ
Sbjct: 1   MTSSVLLDRHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKDKEKRLLEQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSK-NSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWN 120
           EKQLYQAR+RSEIRSKL G HETSK NSDPST+YSP SPSEHIK LA+RFMK+ AIDLWN
Sbjct: 61  EKQLYQARIRSEIRSKLVGAHETSKNNSDPSTSYSPKSPSEHIKDLANRFMKQGAIDLWN 120

Query: 121 EDDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVN 180
           EDDGPLKTPLPRP L+ GSRR ASN RSGSIRSPIDVK+LL + HDG     NM    +N
Sbjct: 121 EDDGPLKTPLPRPALNEGSRRIASNVRSGSIRSPIDVKRLLAENHDGFVGSHNM---GLN 180

Query: 181 GGNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
           G N+K RSYSVQSRRSFRRNESSSSDDD D+ SG DSIKPFA+ LARSPD+
Sbjct: 181 GDNVKGRSYSVQSRRSFRRNESSSSDDDMDYNSGADSIKPFANNLARSPDR 228

[Close]

BLAST of Lag0032757 vs. ExPASy TrEMBL
Match: A0A5A7TMI7 (Putative DEAD-box ATP-dependent RNA helicase 48 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002820 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.9e-95
Identity = 188/231 (81.39%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           MTSS LL+RHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAK+KEKRLLEQ
Sbjct: 1   MTSSVLLDRHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKDKEKRLLEQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHETSK-NSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWN 120
           EKQLY AR+RSEIRSKL G HETSK NSDPST+YSP SPSEHIK LA+RFMK+ AIDLWN
Sbjct: 61  EKQLYHARIRSEIRSKLVGAHETSKNNSDPSTSYSPKSPSEHIKDLANRFMKQGAIDLWN 120

Query: 121 EDDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVN 180
           EDDGPLKTPLPRP L+ GSRR ASN RSGSIRSPIDVK+LL + HDG     NM    +N
Sbjct: 121 EDDGPLKTPLPRPALNEGSRRIASNVRSGSIRSPIDVKRLLAENHDGFVGSHNM---GLN 180

Query: 181 GGNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDK 231
           G N+K RSYSVQSRRSFRRNESSSSDDD D+ SG DSIKPFA+ LARSPD+
Sbjct: 181 GDNVKGRSYSVQSRRSFRRNESSSSDDDMDYNSGADSIKPFANNLARSPDR 228

[Close]

BLAST of Lag0032757 vs. TAIR 10
Match: AT1G63250.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45
Identity = 111/232 (47.84%), Postives = 147/232 (63.36%), Query Frame = 0


Query: 1   MTSSALLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
           M S  L ER  + +  L   I SR+MGGGPRTFPGGLNKWQWKRMHEK+A+EKE +LL+Q
Sbjct: 1   MYSLILRERSGSITGSLWNRISSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQ 60

Query: 61  EKQLYQARVRSEIRSKLAGVHET-SKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWN 120
           EKQLY+AR+R+EIR+K+ G  ++  K +    ++ PMSP EHIK LADRFMK  A D WN
Sbjct: 61  EKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFWN 120

Query: 121 EDDGPLKTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVN 180
           E+DGP+K      +   GSR   S+    +  SPIDV++L++   D MGK  N  FG   
Sbjct: 121 ENDGPVK------KSDQGSRS-GSDSIDSTSNSPIDVRRLVSATCDSMGK--NRVFGS-- 180

Query: 181 GGNLKSRSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDKM 232
                 R +S  SR  F+RNESS  + D      +D++ PF+ K A + +K+
Sbjct: 181 ----SRRGFSSMSR--FKRNESSCDEGDDFDAKKLDTLSPFSPKFAGTKEKV 215

[Close]

BLAST of Lag0032757 vs. TAIR 10
Match: AT2G07750.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 176.0 bits (445), Expect = 3.4e-44
Identity = 104/226 (46.02%), Postives = 146/226 (64.60%), Query Frame = 0


Query: 7   LERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQEKQLYQ 66
           L +  T    L   IFSR+MGGGPRTFPGGLNKWQWKRMHEK+A+EKE +LL+QEKQLY+
Sbjct: 57  LSKRITSERSLWNRIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYE 116

Query: 67  ARVRSEIRSKLAGVHET-SKNSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNEDDGPL 126
           AR+R+EIR+K+ G  ++  K +    ++ PMSP EHIK LADRFMK  A DLWN++DGP+
Sbjct: 117 ARIRTEIRAKMWGHPDSGEKTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGPV 176

Query: 127 KTPLPRPQLHGGSRRFASNDRSGSIRSPIDVKKLLTDKHDGMGKPQNMEFGKVNGGNLKS 186
           K      +   GSR  + +  S    +PIDV++L++   D MGK + ++  +        
Sbjct: 177 K------KFDQGSRSCSDSIDS----TPIDVRRLVSATCDSMGKHRVLDSSR-------- 236

Query: 187 RSYSVQSRRSFRRNESSSSDDDTDHISGVDSIKPFAHKLARSPDKM 232
           R +S  SR  F+RNESS  + D      +D++ PF+ K + + +K+
Sbjct: 237 RGFSSMSR--FKRNESSCDEGDDVDAKKLDTLSPFSPKFSGTKEKV 262

[Close]

BLAST of Lag0032757 vs. TAIR 10
Match: AT2G37920.1 (copper ion transmembrane transporters )

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-17
Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 26  MGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQEKQLYQARVRSEIRSKLAGVHETSK 85
           MGGGPRTFPGG++KWQWKRM  K+ K+  K  L +E+Q+Y+ R R+E+++ +A +    +
Sbjct: 50  MGGGPRTFPGGVSKWQWKRMQAKKQKQLLKARLCRERQIYEMRKRAELKAAVAELERPWE 109

Query: 86  NSDPSTNYSPMSPSEHIKALADRFMKEKAIDLWNEDDGP 125
                 N   +   E +K LADRF K    DLW + DGP
Sbjct: 110 PIHKPPNLFSVCADEQVKVLADRFQKPGGFDLWTDRDGP 148

The following BLAST results are available for this feature:

BLAST of Lag0032757 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928821.1	3.6e-104	86.09	probable DEAD-box ATP-dependent RNA helicase 48 [Cucurbita moschata]	[more]
KAG6579493.1	3.6e-104	86.09	putative DEAD-box ATP-dependent RNA helicase 48, partial [Cucurbita argyrosperma...	[more]
KAG7016956.1	3.6e-104	86.09	putative DEAD-box ATP-dependent RNA helicase 48 [Cucurbita argyrosperma subsp. a...	[more]
XP_023551235.1	2.3e-103	85.65	probable DEAD-box ATP-dependent RNA helicase 48 isoform X2 [Cucurbita pepo subsp...	[more]
XP_023551234.1	2.3e-103	85.65	probable DEAD-box ATP-dependent RNA helicase 48 isoform X1 [Cucurbita pepo subsp...	[more]

BLAST of Lag0032757 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8S9	2.6e-44	47.84	Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80792	4.8e-43	46.02	Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6K7R9	1.0e-24	52.99	DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Lag0032757 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ELD4	1.8e-104	86.09	probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HXQ2	3.7e-102	83.91	probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DZQ8	2.5e-98	83.48	probable DEAD-box ATP-dependent RNA helicase 48 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3AT64	5.1e-96	81.82	probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TMI7	1.9e-95	81.39	Putative DEAD-box ATP-dependent RNA helicase 48 OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Lag0032757 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63250.1	1.8e-45	47.84	DEA(D/H)-box RNA helicase family protein	[more]
AT2G07750.1	3.4e-44	46.02	DEA(D/H)-box RNA helicase family protein	[more]
AT2G37920.1	1.2e-17	44.44	copper ion transmembrane transporters	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..98
None	No IPR available	PANTHER	PTHR37724	OS02G0564300 PROTEIN	coord: 26..211
None	No IPR available	PANTHER	PTHR37724:SF2	SUBFAMILY NOT NAMED	coord: 26..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032757.1	Lag0032757.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity