Lag0032527 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032527
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RNase H domain-containing protein
Location	chr11: 34045853 .. 34046485 (+)
RNA-Seq Expression	Lag0032527
Synteny	Lag0032527

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAAAGAAGACACACACCTTAGATTGATGATCCAACAACGACCCTGCAACGTTGCTAATCAAAATACTCCTCAGTGGAAACCGGTTCCGGAAGGCGCTAGGAAGCTTAGCTGCGACGCTAGCTGGAACGAAAAGACGATGCAGGGAGGGGTAGGATGGCTGCTTCGCGACTGGAATGGAACGATTCTAATGGCGGGTTACAAATCAGTCGAGCGTGGATGGAAGATCTCGTGGTTGGAGGCGATGTCCATCTGTGAGGGGCTGGAGGCGCTTCTCTCGGATTCCTTCTCTCCCGTGAGTGTCGAAAGTGACTCCCTACAAGTGGTACGACTGTTAAATGATGAGGATGAGGATTTTACTAAACTGACTCTTTTCATTAAAGAAGCCCAAAATCTCATATCCCTAAGGAAGGTTACAGCTATCTCACATATATCTAGAGAGCATAACTTTATGGCCCATTCTTTGGCCTGTCGGGCTAGTGAGGAAGATGATTACAAAATCTGGTATTCTGAGTTCCCTAATTGGCTTCTTTCTTTAAATGAGGCTGATATAGGAGGTGTAAATCACGCTAGTGGGGGTTCCTGTCCCACTAGTGAAATATCTTCCGTTGTTTTTGCTTCTTCTCAATGA

mRNA sequence

ATGGACAAAGAAGACACACACCTTAGATTGATGATCCAACAACGACCCTGCAACGTTGCTAATCAAAATACTCCTCAGTGGAAACCGGTTCCGGAAGGCGCTAGGAAGCTTAGCTGCGACGCTAGCTGGAACGAAAAGACGATGCAGGGAGGGGTAGGATGGCTGCTTCGCGACTGGAATGGAACGATTCTAATGGCGGGTTACAAATCAGTCGAGCGTGGATGGAAGATCTCGTGGTTGGAGGCGATGTCCATCTGTGAGGGGCTGGAGGCGCTTCTCTCGGATTCCTTCTCTCCCGTGAGTGTCGAAAGTGACTCCCTACAAGTGGTACGACTGTTAAATGATGAGGATGAGGATTTTACTAAACTGACTCTTTTCATTAAAGAAGCCCAAAATCTCATATCCCTAAGGAAGGTTACAGCTATCTCACATATATCTAGAGAGCATAACTTTATGGCCCATTCTTTGGCCTGTCGGGCTAGTGAGGAAGATGATTACAAAATCTGGTATTCTGAGTTCCCTAATTGGCTTCTTTCTTTAAATGAGGCTGATATAGGAGGTGTAAATCACGCTAGTGGGGGTTCCTGTCCCACTAGTGAAATATCTTCCGTTGTTTTTGCTTCTTCTCAATGA

Coding sequence (CDS)

ATGGACAAAGAAGACACACACCTTAGATTGATGATCCAACAACGACCCTGCAACGTTGCTAATCAAAATACTCCTCAGTGGAAACCGGTTCCGGAAGGCGCTAGGAAGCTTAGCTGCGACGCTAGCTGGAACGAAAAGACGATGCAGGGAGGGGTAGGATGGCTGCTTCGCGACTGGAATGGAACGATTCTAATGGCGGGTTACAAATCAGTCGAGCGTGGATGGAAGATCTCGTGGTTGGAGGCGATGTCCATCTGTGAGGGGCTGGAGGCGCTTCTCTCGGATTCCTTCTCTCCCGTGAGTGTCGAAAGTGACTCCCTACAAGTGGTACGACTGTTAAATGATGAGGATGAGGATTTTACTAAACTGACTCTTTTCATTAAAGAAGCCCAAAATCTCATATCCCTAAGGAAGGTTACAGCTATCTCACATATATCTAGAGAGCATAACTTTATGGCCCATTCTTTGGCCTGTCGGGCTAGTGAGGAAGATGATTACAAAATCTGGTATTCTGAGTTCCCTAATTGGCTTCTTTCTTTAAATGAGGCTGATATAGGAGGTGTAAATCACGCTAGTGGGGGTTCCTGTCCCACTAGTGAAATATCTTCCGTTGTTTTTGCTTCTTCTCAATGA

Protein sequence

MDKEDTHLRLMIQQRPCNVANQNTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWKISWLEAMSICEGLEALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLISLRKVTAISHISREHNFMAHSLACRASEEDDYKIWYSEFPNWLLSLNEADIGGVNHASGGSCPTSEISSVVFASSQ

Homology

[Close]

BLAST of Lag0032527 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 118.6 bits (296), Expect = 6.4e-23
Identity = 64/156 (41.03%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 23  NTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWKISWLEA 82
           N  +W+P P     L+ DASW++ T +GG+GW++R W+G I++AG + VE    +  LEA
Sbjct: 67  NKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEA 126

Query: 83  MSICEGLEALLS-DSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLISLRKVTA 142
            +I EGL  L +     P+ +E+DS +V  LLN + ED TK    ++E  NL    ++ A
Sbjct: 127 SAILEGLRNLTNLGVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILA 186

Query: 143 ISHISREHNFMAHSLACRASEEDDYKIWYSEFPNWL 178
            + + RE N  AHSLA RAS   +  IW   FPNWL
Sbjct: 187 FAKVGRETNGCAHSLAQRASVLRESMIWVDCFPNWL 222

[Close]

BLAST of Lag0032527 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 111.7 bits (278), Expect = 7.8e-21
Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 26  QWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWKISWLEAMSI 85
           QWKP    + KL+ +A+W   T  GG+GW+LRD  G ++ A  + +     I++LE M+I
Sbjct: 78  QWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAI 137

Query: 86  CEGLEALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLISLRKVTAISHI 145
           CEGL A+  +   P+ +ESDSL+ + LL+ + +D T++   ++E   ++   ++ ++ HI
Sbjct: 138 CEGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHI 197

Query: 146 SREHNFMAHSLACRASEED 165
           SRE N +AH LA RA E D
Sbjct: 198 SREANKVAHGLARRAMEND 216

[Close]

BLAST of Lag0032527 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-19
Identity = 54/154 (35.06%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 19  VANQNTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWKIS 78
           + +    +WKP    + KL+ DA+W   T  GG+GW+LRD  G ++ A  + +     I+
Sbjct: 71  IGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNIT 130

Query: 79  WLEAMSICEGLEALLSDSFSPVS--------VESDSLQVVRLLNDEDEDFTKLTLFIKEA 138
           +LE M+ICEGL A+  +   P+         +ESDSL+ + LL+ + +D T++   ++E 
Sbjct: 131 YLEVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEI 190

Query: 139 QNLISLRKVTAISHISREHNFMAHSLACRASEED 165
             ++   K+ ++ HISRE N +AH LA RA E D
Sbjct: 191 WQMMEDMKIVSMRHISREANKVAHDLARRAMEND 224

[Close]

BLAST of Lag0032527 vs. NCBI nr
Match: CAB4273082.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 98.2 bits (243), Expect = 8.9e-17
Identity = 53/171 (30.99%), Postives = 84/171 (49.12%), Query Frame = 0


Query: 15   RPCNVANQNTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERG 74
            RP  V  +    W+  P G  K++CDA+W  +T  GGVGW++RD +G ++ AG K   RG
Sbjct: 1135 RPPEVQAETVTSWRKPPYGVLKVNCDAAWVSQTQMGGVGWVVRDSDGWMVQAGGKGDMRG 1194

Query: 75   WKISWLEAMSICEGLEALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLI 134
                 +EA +I E L A +    S + VESDSLQV+R++  E      +   + + + L+
Sbjct: 1195 GSALAMEAEAIREALVACVQSGLSKLEVESDSLQVIRMIGGEWNMDIAVDTIVFDIKQLV 1254

Query: 135  SLRKVTAISHISREHNFMAHSLACRASEEDDYKIWYSEFPNWLLSLNEADI 186
               +     +  R  N  AH +A   S       W   +P W+  +  +D+
Sbjct: 1255 GQFQHCVFLYTPRNCNKAAHKIAAFVSRVGGVHTWDDLWPEWIFDILVSDV 1305

[Close]

BLAST of Lag0032527 vs. NCBI nr
Match: CAB4279811.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 95.5 bits (236), Expect = 5.8e-16
Identity = 51/171 (29.82%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 15   RPCNVANQNTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERG 74
            RP  +  +    W+ +P G  K++CDA+W  +T  GGVGW++RD  G ++ AG K   RG
Sbjct: 1047 RPPEIQAETVTSWRKLPYGVLKVNCDAAWVSQTQMGGVGWVVRDSYGWMVQAGCKGDMRG 1106

Query: 75   WKISWLEAMSICEGLEALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLI 134
                 +EA +I E L A +    S + VESDSLQ++R+L  E      +   + + + L+
Sbjct: 1107 GSALAMEAKAIREALLACVQSGLSKLEVESDSLQLIRMLGGEWNIDIAVETIVFDIKQLV 1166

Query: 135  SLRKVTAISHISREHNFMAHSLACRASEEDDYKIWYSEFPNWLLSLNEADI 186
               +     +  R  N  AH +    S       W   +P W+  +  +D+
Sbjct: 1167 CQFQHCVFLYTPRNCNKAAHKITAFVSRVGGVHTWDDLWPEWIFYILASDV 1217

[Close]

BLAST of Lag0032527 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.1e-23
Identity = 64/156 (41.03%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 23  NTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWKISWLEA 82
           N  +W+P P     L+ DASW++ T +GG+GW++R W+G I++AG + VE    +  LEA
Sbjct: 67  NKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEA 126

Query: 83  MSICEGLEALLS-DSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLISLRKVTA 142
            +I EGL  L +     P+ +E+DS +V  LLN + ED TK    ++E  NL    ++ A
Sbjct: 127 SAILEGLRNLTNLGVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILA 186

Query: 143 ISHISREHNFMAHSLACRASEEDDYKIWYSEFPNWL 178
            + + RE N  AHSLA RAS   +  IW   FPNWL
Sbjct: 187 FAKVGRETNGCAHSLAQRASVLRESMIWVDCFPNWL 222

[Close]

BLAST of Lag0032527 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-21
Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 26  QWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWKISWLEAMSI 85
           QWKP    + KL+ +A+W   T  GG+GW+LRD  G ++ A  + +     I++LE M+I
Sbjct: 78  QWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAI 137

Query: 86  CEGLEALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLISLRKVTAISHI 145
           CEGL A+  +   P+ +ESDSL+ + LL+ + +D T++   ++E   ++   ++ ++ HI
Sbjct: 138 CEGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHI 197

Query: 146 SREHNFMAHSLACRASEED 165
           SRE N +AH LA RA E D
Sbjct: 198 SREANKVAHGLARRAMEND 216

[Close]

BLAST of Lag0032527 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19
Identity = 54/154 (35.06%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 19  VANQNTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWKIS 78
           + +    +WKP    + KL+ DA+W   T  GG+GW+LRD  G ++ A  + +     I+
Sbjct: 71  IGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNIT 130

Query: 79  WLEAMSICEGLEALLSDSFSPVS--------VESDSLQVVRLLNDEDEDFTKLTLFIKEA 138
           +LE M+ICEGL A+  +   P+         +ESDSL+ + LL+ + +D T++   ++E 
Sbjct: 131 YLEVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEI 190

Query: 139 QNLISLRKVTAISHISREHNFMAHSLACRASEED 165
             ++   K+ ++ HISRE N +AH LA RA E D
Sbjct: 191 WQMMEDMKIVSMRHISREANKVAHDLARRAMEND 224

[Close]

BLAST of Lag0032527 vs. ExPASy TrEMBL
Match: A0A6J5UAY2 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20161 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.3e-17
Identity = 53/171 (30.99%), Postives = 84/171 (49.12%), Query Frame = 0


Query: 15   RPCNVANQNTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERG 74
            RP  V  +    W+  P G  K++CDA+W  +T  GGVGW++RD +G ++ AG K   RG
Sbjct: 1135 RPPEVQAETVTSWRKPPYGVLKVNCDAAWVSQTQMGGVGWVVRDSDGWMVQAGGKGDMRG 1194

Query: 75   WKISWLEAMSICEGLEALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLI 134
                 +EA +I E L A +    S + VESDSLQV+R++  E      +   + + + L+
Sbjct: 1195 GSALAMEAEAIREALVACVQSGLSKLEVESDSLQVIRMIGGEWNMDIAVDTIVFDIKQLV 1254

Query: 135  SLRKVTAISHISREHNFMAHSLACRASEEDDYKIWYSEFPNWLLSLNEADI 186
               +     +  R  N  AH +A   S       W   +P W+  +  +D+
Sbjct: 1255 GQFQHCVFLYTPRNCNKAAHKIAAFVSRVGGVHTWDDLWPEWIFDILVSDV 1305

[Close]

BLAST of Lag0032527 vs. ExPASy TrEMBL
Match: A0A6J5UV01 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS32434 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.8e-16
Identity = 51/171 (29.82%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 15   RPCNVANQNTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERG 74
            RP  +  +    W+ +P G  K++CDA+W  +T  GGVGW++RD  G ++ AG K   RG
Sbjct: 1047 RPPEIQAETVTSWRKLPYGVLKVNCDAAWVSQTQMGGVGWVVRDSYGWMVQAGCKGDMRG 1106

Query: 75   WKISWLEAMSICEGLEALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLI 134
                 +EA +I E L A +    S + VESDSLQ++R+L  E      +   + + + L+
Sbjct: 1107 GSALAMEAKAIREALLACVQSGLSKLEVESDSLQLIRMLGGEWNIDIAVETIVFDIKQLV 1166

Query: 135  SLRKVTAISHISREHNFMAHSLACRASEEDDYKIWYSEFPNWLLSLNEADI 186
               +     +  R  N  AH +    S       W   +P W+  +  +D+
Sbjct: 1167 CQFQHCVFLYTPRNCNKAAHKITAFVSRVGGVHTWDDLWPEWIFYILASDV 1217

[Close]

BLAST of Lag0032527 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 6.8e-07
Identity = 38/160 (23.75%), Postives = 67/160 (41.88%), Query Frame = 0


Query: 18  NVANQNTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWKI 77
           N       +W P      K + DAS +E+    G+GW+LR+  GT++  G    +     
Sbjct: 96  NADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTT 155

Query: 78  SWLEAMSICEGLEALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLISLR 137
              E  ++   ++A        V  E D+  + R++N +  +  +L  F+   Q+ I   
Sbjct: 156 EEAECSTLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSF 215

Query: 138 KVTAISHISREHNFMAHSLACRASEEDDYKIWYSEFPNWL 178
           +    S   RE N  A  LA +A +E+     +   P +L
Sbjct: 216 ESIEFSFKHREQNGCADFLAKQAIKENTQWSLFHSCPYFL 254

[Close]

BLAST of Lag0032527 vs. TAIR 10
Match: AT2G04420.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 45/163 (27.61%), Postives = 69/163 (42.33%), Query Frame = 0


Query: 17  CNVANQNTPQWKPVPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWK 76
           CN       +W+  P G  K + D S+N +T Q   GWL+RD  G     G      G  
Sbjct: 53  CNNRESTHQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKG--FYKGAAQAVGGTM 112

Query: 77  ISWLEA--MSICEGLEALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLI 136
            + LE+   ++   ++   S  +  V  E DS QV  LLN +   F     +I+EA +  
Sbjct: 113 NNALESELQALVMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQMHFGAFN-WIREAWSWS 172

Query: 137 SLRKVTAISHISREHNFMAHSLACRASEEDDYKIWYSEFPNWL 178
              +    S   R +N  A  LA     +D   I++   PN++
Sbjct: 173 KRFEEVIFSWTPRTNNQPADMLAKSHLPQDTSFIYHYFVPNFI 212

[Close]

BLAST of Lag0032527 vs. TAIR 10
Match: AT1G52990.1 (thioredoxin family protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-05
Identity = 37/148 (25.00%), Postives = 67/148 (45.27%), Query Frame = 0


Query: 30  VPEGARKLSCDASWNEKTMQGGVGWLLRDWNGTILMAGYKSVERGWKISWLEAMSICEGL 89
           VP    K + DAS +E  +  G+GWL+R+  GT+L  G    +        E  ++   +
Sbjct: 43  VPSCRVKCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAI 102

Query: 90  EALLSDSFSPVSVESDSLQVVRLLNDEDEDFTKLTLFIKEAQNLISLRKVTAISHISREH 149
           +A  +  ++ V  E D+  V RL+N +  D  +L  ++   ++ I     T      RE 
Sbjct: 103 QATSAFGYTKVIFEGDNSNVNRLINTK-SDNPRLKHYLDTIKSWIPSFTSTEFIFTHREQ 162

Query: 150 NFMAHSLACRASEEDDYKIWYSEFPNWL 178
           N  A +L  +A +       ++  P++L
Sbjct: 163 NQCADTLVKKAIKSSTQWSLFNCCPHFL 189

The following BLAST results are available for this feature:

BLAST of Lag0032527 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155262.1	6.4e-23	41.03	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_022143535.1	7.8e-21	38.13	uncharacterized protein LOC111013412 [Momordica charantia]	[more]
XP_022156777.1	2.5e-19	35.06	uncharacterized protein LOC111023608 [Momordica charantia]	[more]
CAB4273082.1	8.9e-17	30.99	unnamed protein product [Prunus armeniaca]	[more]
CAB4279811.1	5.8e-16	29.82	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Lag0032527 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0032527 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNV9	3.1e-23	41.03	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1CP26	3.8e-21	38.13	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DSV1	1.2e-19	35.06	uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J5UAY2	4.3e-17	30.99	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UV01	2.8e-16	29.82	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]

BLAST of Lag0032527 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65005.1	6.8e-07	23.75	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G04420.1	2.0e-06	27.61	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G52990.1	2.2e-05	25.00	thioredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 39..159 e-value: 2.2E-23 score: 82.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 35..163 e-value: 4.3E-13 score: 51.4
None	No IPR available	PANTHER	PTHR33033	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 22..178
None	No IPR available	PANTHER	PTHR33033:SF67	SUBFAMILY NOT NAMED	coord: 22..178
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 37..157 e-value: 4.00398E-21 score: 82.7472
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 36..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032527.1	Lag0032527.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity