Lag0032475 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAATTCATATTCATCTTTCTTGGGTGGGAATGCACATTGGACTAATGATTATGGCCTATCTACAAGTTACTATTATTTTTGCGACATCGGTTATCCAAATGTAGAGGGATTTATGGCATCTTACCGAGGTCAACGATACCACCTTACAGAATGGCATGGACGGAACCCACTGACCAACCTGAAAGAGTTATTCAACATGAGACATTCCATTGCTGAAAAAATGATTGAACGAGTGTTTGGTATGTTGAAGGGTCGGTGGGCAATCTTACGAGGCAATTCCTACTATCCCGTTGATATGCAATGTAGGTTGATCATTGCTTGTTGTTTGCTCCATAACTTGATCATTCGAGAAATGGGATTGTTGCCTTGTGCAATATAA ATGACGAATTCATATTCATCTTTCTTGGGTGGGAATGCACATTGGACTAATGATTATGGCCTATCTACAAGTTACTATTATTTTTGCGACATCGGTTATCCAAATGTAGAGGGATTTATGGCATCTTACCGAGGTCAACGATACCACCTTACAGAATGGCATGGACGGAACCCACTGACCAACCTGAAAGAGTTATTCAACATGAGACATTCCATTGCTGAAAAAATGATTGAACGAGTGTTTGGTATGTTGAAGGGTCGGTGGGCAATCTTACGAGGCAATTCCTACTATCCCGTTGATATGCAATGTAGGTTGATCATTGCTTGTTGTTTGCTCCATAACTTGATCATTCGAGAAATGGGATTGTTGCCTTGTGCAATATAA ATGACGAATTCATATTCATCTTTCTTGGGTGGGAATGCACATTGGACTAATGATTATGGCCTATCTACAAGTTACTATTATTTTTGCGACATCGGTTATCCAAATGTAGAGGGATTTATGGCATCTTACCGAGGTCAACGATACCACCTTACAGAATGGCATGGACGGAACCCACTGACCAACCTGAAAGAGTTATTCAACATGAGACATTCCATTGCTGAAAAAATGATTGAACGAGTGTTTGGTATGTTGAAGGGTCGGTGGGCAATCTTACGAGGCAATTCCTACTATCCCGTTGATATGCAATGTAGGTTGATCATTGCTTGTTGTTTGCTCCATAACTTGATCATTCGAGAAATGGGATTGTTGCCTTGTGCAATATAA MTNSYSSFLGGNAHWTNDYGLSTSYYYFCDIGYPNVEGFMASYRGQRYHLTEWHGRNPLTNLKELFNMRHSIAEKMIERVFGMLKGRWAILRGNSYYPVDMQCRLIIACCLLHNLIIREMGLLPCAI Homology
BLAST of Lag0032475 vs. NCBI nr
Match: XP_008455792.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo]) HSP 1 Score: 154.1 bits (388), Expect = 8.3e-34 Identity = 70/105 (66.67%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Lag0032475 vs. NCBI nr
Match: KAA0048281.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33 Identity = 71/105 (67.62%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Lag0032475 vs. NCBI nr
Match: KAA0065306.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33 Identity = 69/97 (71.13%), Postives = 75/97 (77.32%), Query Frame = 0
BLAST of Lag0032475 vs. NCBI nr
Match: KAA0060719.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01462.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 152.5 bits (384), Expect = 2.4e-33 Identity = 71/101 (70.30%), Postives = 78/101 (77.23%), Query Frame = 0
BLAST of Lag0032475 vs. NCBI nr
Match: KAA0048191.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 152.1 bits (383), Expect = 3.1e-33 Identity = 70/96 (72.92%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of Lag0032475 vs. ExPASy Swiss-Prot
Match: Q9M2U3 (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05 Identity = 31/93 (33.33%), Postives = 44/93 (47.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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