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Lag0032409 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCATTCTAGAGAAGAACCCAGAGAGATCTCCAAGTACCTCTTTTCAAGAGGGGGTTTGCTATGCCAAGAAGGACTACAATCTGGCCAAACACCCCGAAATCGATGTTCCAAATTTGCAAGTGATTAAGCCGATGCAGAGCTTCAAGTCTAAGGAGTATGTTCGCGAGACATTTGCCTGGATGGATTACTACTGGTACCTCACGAACGATGGCATTGAGTTTCTGAGGACTTATTTAAAATAATGTTCACAAAACTCCATTTATCACTTTCTTTTAACCCGAAATTTCCCTCCTCGTCGTTCACCAAAGGCAAAACAGAATCCAAACCAGAAACCCCCAAATCCCGAAGGCTAATTTCAGAAGCAGATCAAAGTACCAATTTACAAGCCCATTTCCATCAGAACCAATTCGACAACCTAAATCTTTCGCAAGCGAGAGAGAGAAAGAGAGACATACAGAAGAGTCTGGTGAGCCAGATCTAACGAGAAGAGTGCCTTGCGAAGTCCCGCTCTAATTCTGGTAATACTCAACGTCAGGAGGAAGCATGCAAGGAAGAAGACGATCTTCGAATCAATCTTCAATGGCGCTGTAACACCCCAAATTTCAGGTAAGGTCCTTTTCAAGCCTCAAGTTAATTTCGTGTTTAAAAATATTTTTCTTTTATTTTTATTTTATTATTCCTCTTAAAGTATATGGGAATTTTCTTGATATTTTGTGGTGCTTCAGGAATTCTCGAATTTAAAAGATAAGAGGGGAAAGTTGGAATGTTGTAGGGTTCATTTGTTATTTTCTTTTGGAATAAAATTAGGGGAAAGTTTAGTTAAGGAAATCCTAGGGAAAAAAAAAGGGGGAAATTCATTTTTTTTAATCTCTCATTCCCGCGTGCACAGCCCCCCCCATCTGGTTCCTTCGACCGCCGAAGTTCCTCCTTGCGTCTCTCCCTCTCGTTGTCTCTCCTTCACCGCAGCCCTCTCTCTCAATCCTCCGTTAGAGGTCGTCGGTGCCGTTTCTCCCTCAACATCGATCGTTGTTCGAAGACCCGTTCGCCGTCGACCTACAATCCACGCGGCTGTTGTCGTCACGCACGTCCAGCTGCTTGCCAAGGTCGGTTTTGTCGTGTTCCTGTTGCTACCATCGGAGCCTATGGTCGCCGTCGCCGGAGACTTGTAGTCAGCAGCTTCGAGTTCGTTGGCATTTTGTTCTAG ATGATCATTCTAGAGAAGAACCCAGAGAGATCTCCAAGTACCTCTTTTCAAGAGGGGGTTTGCTATGCCAAGAAGGACTACAATCTGGCCAAACACCCCGAAATCGATGTTCCAAATTTGCAAGTGATTAAGCCGATGCAGAGCTTCAAGTCTAAGGAGTATGTTCGCGAGACATTTGCCTGGATGGATTACTACTGGAGGAAGCATGCAAGGAAGAAGACGATCTTCGAATCAATCTTCAATGGCGCTGTAACACCCCAAATTTCAGGTAAGCCCCCCCCATCTGGTTCCTTCGACCGCCGAAGTTCCTCCTTGCGTCTCTCCCTCTCGTTGTCTCTCCTTCACCGCAGCCCTCTCTCTCAATCCTCCGTTAGAGGTCGTCGGTGCCGTTTCTCCCTCAACATCGATCGTTGTTCGAAGACCCGTTCGCCGTCGACCTACAATCCACGCGGCTGTTGTCGTCACGCACGTCCAGCTGCTTGCCAAGGTCGGTTTTGTCGTGTTCCTGTTGCTACCATCGGAGCCTATGGTCGCCGTCGCCGGAGACTTGTAGTCAGCAGCTTCGAGTTCGTTGGCATTTTGTTCTAG ATGATCATTCTAGAGAAGAACCCAGAGAGATCTCCAAGTACCTCTTTTCAAGAGGGGGTTTGCTATGCCAAGAAGGACTACAATCTGGCCAAACACCCCGAAATCGATGTTCCAAATTTGCAAGTGATTAAGCCGATGCAGAGCTTCAAGTCTAAGGAGTATGTTCGCGAGACATTTGCCTGGATGGATTACTACTGGAGGAAGCATGCAAGGAAGAAGACGATCTTCGAATCAATCTTCAATGGCGCTGTAACACCCCAAATTTCAGGTAAGCCCCCCCCATCTGGTTCCTTCGACCGCCGAAGTTCCTCCTTGCGTCTCTCCCTCTCGTTGTCTCTCCTTCACCGCAGCCCTCTCTCTCAATCCTCCGTTAGAGGTCGTCGGTGCCGTTTCTCCCTCAACATCGATCGTTGTTCGAAGACCCGTTCGCCGTCGACCTACAATCCACGCGGCTGTTGTCGTCACGCACGTCCAGCTGCTTGCCAAGGTCGGTTTTGTCGTGTTCCTGTTGCTACCATCGGAGCCTATGGTCGCCGTCGCCGGAGACTTGTAGTCAGCAGCTTCGAGTTCGTTGGCATTTTGTTCTAG MIILEKNPERSPSTSFQEGVCYAKKDYNLAKHPEIDVPNLQVIKPMQSFKSKEYVRETFAWMDYYWRKHARKKTIFESIFNGAVTPQISGKPPPSGSFDRRSSSLRLSLSLSLLHRSPLSQSSVRGRRCRFSLNIDRCSKTRSPSTYNPRGCCRHARPAACQGRFCRVPVATIGAYGRRRRRLVVSSFEFVGILF Homology
BLAST of Lag0032409 vs. NCBI nr
Match: XP_024970104.1 (40S ribosomal protein S10-1 [Cynara cardunculus var. scolymus] >KVI07119.1 Plectin/S10, N-terminal [Cynara cardunculus var. scolymus]) HSP 1 Score: 115.5 bits (288), Expect = 5.0e-22 Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of Lag0032409 vs. NCBI nr
Match: KAG5565897.1 (hypothetical protein RHGRI_001721 [Rhododendron griersonianum]) HSP 1 Score: 115.5 bits (288), Expect = 5.0e-22 Identity = 55/66 (83.33%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Lag0032409 vs. NCBI nr
Match: XP_042000610.1 (40S ribosomal protein S10-1-like [Salvia splendens] >XP_042037174.1 40S ribosomal protein S10-1-like [Salvia splendens] >KAG6387733.1 hypothetical protein SASPL_152925 [Salvia splendens] >KAG6409856.1 hypothetical protein SASPL_127898 [Salvia splendens]) HSP 1 Score: 115.5 bits (288), Expect = 5.0e-22 Identity = 55/66 (83.33%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Lag0032409 vs. NCBI nr
Match: KAG6426536.1 (hypothetical protein SASPL_110761 [Salvia splendens]) HSP 1 Score: 115.2 bits (287), Expect = 6.5e-22 Identity = 55/66 (83.33%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Lag0032409 vs. NCBI nr
Match: XP_024031356.1 (40S ribosomal protein S10-1 [Morus notabilis]) HSP 1 Score: 115.2 bits (287), Expect = 6.5e-22 Identity = 55/66 (83.33%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy Swiss-Prot
Match: Q9LTF2 (40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21 Identity = 50/66 (75.76%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy Swiss-Prot
Match: P0DKK8 (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21 Identity = 50/66 (75.76%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy Swiss-Prot
Match: P0DKK9 (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21 Identity = 50/66 (75.76%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy Swiss-Prot
Match: Q9SW09 (40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.4e-21 Identity = 49/66 (74.24%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy Swiss-Prot
Match: Q9FFS8 (40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.0e-17 Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy TrEMBL
Match: A0A4D9ANN8 (Small subunit ribosomal protein S10e OS=Salvia splendens OX=180675 GN=RP-S10e PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 2.4e-22 Identity = 55/66 (83.33%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy TrEMBL
Match: A0A103YDJ2 (Plectin/S10, N-terminal OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_014516 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 2.4e-22 Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy TrEMBL
Match: A0A6J1JA51 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 3.2e-22 Identity = 55/66 (83.33%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy TrEMBL
Match: M5XFN5 (S10_plectin domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_1G534700 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 3.2e-22 Identity = 55/66 (83.33%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Lag0032409 vs. ExPASy TrEMBL
Match: A0A6J5W863 (S10_plectin domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS9941 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 3.2e-22 Identity = 55/66 (83.33%), Postives = 55/66 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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