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Lag0032396 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAACTCTTTTCGAATTCCTCGTGGCCTCATTCATGATCTTCATCAGATTATGGGTCGTTTTTTGTGGCAGGGGTTTAAGGAGGGTCGATCCATCCATTGGGTGAAGTGGGAAGAGCTGCGTCTTCCCAAATGTTTTGGAGGTTTGGGCTTTTTGAATCTTGAGCATTTTAACCAATCATTGTTAGCAAAGCAATGTTGGCGCCTGATAAGGGATCCCTCTTCTCTTCTGTATGCAGTTCTTAAGAGTCAATATTTTCCTCATGGCAGTCTTTTTTATGTTGAATTGGGTTCTCGGCCTTTTTTATCTGGCGAAGTTTGTTTTGGGGTCGTGATTTGTTACGTAAGGGCTGTGTTGGCGAATTGGAGATGGTAATTCAGTTGGGGTTTATGGTGATAGTTGGTTACCTCGTGATTCTTCCTTCCAAGTTCAATCGGTTCCAACTTTGCCTTTAGACTCTAAGGTTAACTGTCTCTTTTCTGATATTGGTGATTGGGATGTTGTAAAACTACAGACCCATTTTTCATTTGATTAGGCTTGGTTAATTTCTAGTCTTCCTCGTGGGGGTGCAGCTATGGAAGATCTCCAGATTTTGCATTTTGAGAAATCTGGTTTGTTTTCTGTTAAAAGGGGATATCATATTGTCCAACGCGAGATTATTCTTAGTCGCCCATCCTCTTCGAACTCGACTCCTTTCTGTCGTTGGTGGGTCAGATTCTGGAATATGAAAATTCCTAGTAAGATAAAACATTTTATGTGGCGTCTTTGTCGTGATCGGCTACCAACTGGAGTGAATCTTGCTTCCAAGTTGATTGATTGTTCCTGTTTTTGTGGTTTCTGTCACCGTTTTGAGGAAGATAGTATGCATCTGTTTGTTCGTTGTAAAATCACCCGGCGATTGTGGGCTAGCTCAAAATTTTTGCCTCTGATACAGGTCTTGTCTGCTACAATTTTTTATATCATTCGTGATTGGCAGGACCGAATCAGATGGGTTGAATTTGAGGAGCTTTCAGTTTTCTTGTGGGCTGTTTGGAATGCGCACAACTGGTGGTTGTGTTCGGGGTCTGCTGTAGATTGGAATTTAGGTGAGTATGTTGCTTCTTATACTCAGGCTTTCTGTTCGGTTGCTACAATGGGTGGTTCTGATTTAGTTGGACCGATTGGCAGGGTCTTTGTGCGTTGGACAGCACCAACTGGGGTTGCTGTGAAATTGAATTCAGATGCTGCTTTAAGTTTGGATGGGGCTTGA ATGATGAACTCTTTTCGAATTCCTCGTGGCCTCATTCATGATCTTCATCAGATTATGGGTCGTTTTTTGTGGCAGGGGTTTAAGGAGGGTCGATCCATCCATTGGGTGAAGTGGGAAGAGCTGCGTCTTCCCAAATGTTTTGGAGGTTTGGGCTTTTTGAATCTTGAGCATTTTAACCAATCATTGTTAGCAAAGCAATGTTGGCGCCTGATAAGGGATCCCTCTTCTCTTCTGTATGCAGTTCTTAAGAGTCAATATTTTCCTCATGGCAGTCTTTTTTATGTTGAATTGGGTTCTCGGCCTTTTTTATCTGGCGAAGTTTGTTTTGGGGTCGTGATTTGTTACGTAAGGGCTGTGTTGGCGAATTGGAGATGTCTTCCTCGTGGGGGTGCAGCTATGGAAGATCTCCAGATTTTGCATTTTGAGAAATCTGGTTTGTTTTCTGTTAAAAGGGGATATCATATTGTCCAACGCGAGATTATTCTTAGTCGCCCATCCTCTTCGAACTCGACTCCTTTCTGTCGTTGGTGGGTCAGATTCTGGAATATGAAAATTCCTAGTAAGATAAAACATTTTATGTGGCGTCTTTGTCGTGATCGGCTACCAACTGGAGTGAATCTTGCTTCCAAGTTGATTGATTGTTCCTGTTTTTGTGGTTTCTGTCACCGTTTTGAGGAAGATAGTATGCATCTGTTTGTTCGTTGTAAAATCACCCGGCGATTGTGGGCTAGCTCAAAATTTTTGCCTCTGATACAGGTCTTGTCTGCTACAATTTTTTATATCATTCGTGATTGGCAGGACCGAATCAGATGGGTTGAATTTGAGGAGCTTTCAGTTTTCTTGTGGGCTGTTTGGAATGCGCACAACTGGTGGTTGTGTTCGGGGTCTGCTGTAGATTGGAATTTAGGTGAGTATGTTGCTTCTTATACTCAGGCTTTCTGTTCGGTTGCTACAATGGGTGGTTCTGATTTAGTTGGACCGATTGGCAGGGTCTTTGTGCGTTGGACAGCACCAACTGGGGTTGCTGTGAAATTGAATTCAGATGCTGCTTTAAGTTTGGATGGGGCTTGA ATGATGAACTCTTTTCGAATTCCTCGTGGCCTCATTCATGATCTTCATCAGATTATGGGTCGTTTTTTGTGGCAGGGGTTTAAGGAGGGTCGATCCATCCATTGGGTGAAGTGGGAAGAGCTGCGTCTTCCCAAATGTTTTGGAGGTTTGGGCTTTTTGAATCTTGAGCATTTTAACCAATCATTGTTAGCAAAGCAATGTTGGCGCCTGATAAGGGATCCCTCTTCTCTTCTGTATGCAGTTCTTAAGAGTCAATATTTTCCTCATGGCAGTCTTTTTTATGTTGAATTGGGTTCTCGGCCTTTTTTATCTGGCGAAGTTTGTTTTGGGGTCGTGATTTGTTACGTAAGGGCTGTGTTGGCGAATTGGAGATGTCTTCCTCGTGGGGGTGCAGCTATGGAAGATCTCCAGATTTTGCATTTTGAGAAATCTGGTTTGTTTTCTGTTAAAAGGGGATATCATATTGTCCAACGCGAGATTATTCTTAGTCGCCCATCCTCTTCGAACTCGACTCCTTTCTGTCGTTGGTGGGTCAGATTCTGGAATATGAAAATTCCTAGTAAGATAAAACATTTTATGTGGCGTCTTTGTCGTGATCGGCTACCAACTGGAGTGAATCTTGCTTCCAAGTTGATTGATTGTTCCTGTTTTTGTGGTTTCTGTCACCGTTTTGAGGAAGATAGTATGCATCTGTTTGTTCGTTGTAAAATCACCCGGCGATTGTGGGCTAGCTCAAAATTTTTGCCTCTGATACAGGTCTTGTCTGCTACAATTTTTTATATCATTCGTGATTGGCAGGACCGAATCAGATGGGTTGAATTTGAGGAGCTTTCAGTTTTCTTGTGGGCTGTTTGGAATGCGCACAACTGGTGGTTGTGTTCGGGGTCTGCTGTAGATTGGAATTTAGGTGAGTATGTTGCTTCTTATACTCAGGCTTTCTGTTCGGTTGCTACAATGGGTGGTTCTGATTTAGTTGGACCGATTGGCAGGGTCTTTGTGCGTTGGACAGCACCAACTGGGGTTGCTGTGAAATTGAATTCAGATGCTGCTTTAAGTTTGGATGGGGCTTGA MMNSFRIPRGLIHDLHQIMGRFLWQGFKEGRSIHWVKWEELRLPKCFGGLGFLNLEHFNQSLLAKQCWRLIRDPSSLLYAVLKSQYFPHGSLFYVELGSRPFLSGEVCFGVVICYVRAVLANWRCLPRGGAAMEDLQILHFEKSGLFSVKRGYHIVQREIILSRPSSSNSTPFCRWWVRFWNMKIPSKIKHFMWRLCRDRLPTGVNLASKLIDCSCFCGFCHRFEEDSMHLFVRCKITRRLWASSKFLPLIQVLSATIFYIIRDWQDRIRWVEFEELSVFLWAVWNAHNWWLCSGSAVDWNLGEYVASYTQAFCSVATMGGSDLVGPIGRVFVRWTAPTGVAVKLNSDAALSLDGA Homology
BLAST of Lag0032396 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia]) HSP 1 Score: 225.7 bits (574), Expect = 6.3e-55 Identity = 135/418 (32.30%), Postives = 200/418 (47.85%), Query Frame = 0
BLAST of Lag0032396 vs. NCBI nr
Match: XP_024043083.1 (uncharacterized protein LOC112099827 [Citrus clementina]) HSP 1 Score: 181.0 bits (458), Expect = 1.8e-41 Identity = 117/364 (32.14%), Postives = 178/364 (48.90%), Query Frame = 0
BLAST of Lag0032396 vs. NCBI nr
Match: XP_030497433.1 (uncharacterized protein LOC115713087 [Cannabis sativa]) HSP 1 Score: 180.6 bits (457), Expect = 2.3e-41 Identity = 105/326 (32.21%), Postives = 162/326 (49.69%), Query Frame = 0
BLAST of Lag0032396 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina]) HSP 1 Score: 179.9 bits (455), Expect = 3.9e-41 Identity = 110/356 (30.90%), Postives = 156/356 (43.82%), Query Frame = 0
BLAST of Lag0032396 vs. NCBI nr
Match: XP_024156142.1 (uncharacterized protein LOC112164137 [Rosa chinensis]) HSP 1 Score: 176.8 bits (447), Expect = 3.3e-40 Identity = 118/424 (27.83%), Postives = 191/424 (45.05%), Query Frame = 0
BLAST of Lag0032396 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.0e-16 Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 0
BLAST of Lag0032396 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.4e-09 Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of Lag0032396 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.0e-55 Identity = 135/418 (32.30%), Postives = 200/418 (47.85%), Query Frame = 0
BLAST of Lag0032396 vs. ExPASy TrEMBL
Match: A0A2N9HRH8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42121 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 2.7e-43 Identity = 105/309 (33.98%), Postives = 153/309 (49.51%), Query Frame = 0
BLAST of Lag0032396 vs. ExPASy TrEMBL
Match: A0A2N9J4E8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59377 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.0e-42 Identity = 102/306 (33.33%), Postives = 158/306 (51.63%), Query Frame = 0
BLAST of Lag0032396 vs. ExPASy TrEMBL
Match: A0A2N9I475 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47007 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 2.3e-42 Identity = 104/309 (33.66%), Postives = 152/309 (49.19%), Query Frame = 0
BLAST of Lag0032396 vs. ExPASy TrEMBL
Match: A0A2N9EL92 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3427 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 2.3e-42 Identity = 104/309 (33.66%), Postives = 152/309 (49.19%), Query Frame = 0
BLAST of Lag0032396 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 88.2 bits (217), Expect = 1.5e-17 Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 0
BLAST of Lag0032396 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 85.9 bits (211), Expect = 7.2e-17 Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 0
BLAST of Lag0032396 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 60.5 bits (145), Expect = 3.2e-09 Identity = 43/161 (26.71%), Postives = 67/161 (41.61%), Query Frame = 0
BLAST of Lag0032396 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 8.0e-08 Identity = 27/100 (27.00%), Postives = 41/100 (41.00%), Query Frame = 0
BLAST of Lag0032396 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 8.0e-08 Identity = 34/127 (26.77%), Postives = 58/127 (45.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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