Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGATAAATTACTTATCACTTGTTGCATACTGTGTATCTTTTGCTTCAGCATTTTATCAAAATGAAGTGGAAGCTATTCAAAACCTCGTGGATACGATAAATTACTTATCACTTGTTGTAGATTGTGTATGCTTGCACAATATTCTAGAGCTTCTTTTTACTATATTTTTACCCCACTCTAGAAGGCAACACCTGGCTCTAGTTTAAGGAAGCATTCTTCCTAAAGTATTACTCAGCGATTATCAGATACAGAAAGAAGGTAGAGTTCCTGGCCTTGAAGCATGGTGAAAGGTCAGTGGAAGAGTATGAGCTGGAGTTCAAGCAGTTATCTCGCTTTGCCTCGAAAATAGTGGACACTGAAGCAAAGAAGACGAAGAGGTTCATCTGGGGCCCCAAGGATGATGAGCAAAGAGTGGTAGGGGCTCTTGCCCTAGCTGATTATGCGGCGGCCCTTCGAGCGGCCACGTTCATGGCCATGCCAGCTACGAGTGCAACCCCGGTGGCCAAGAAGCCAGAATTCAGCGCAGGCCAAAAAAGGAAGTTTGATCGGAGTTTCTCCAAGTCGCAACAGAATTCTCAGAATCGACGATCCACGCGCCTAAGGAATGTAGGAAAGGAAAAGCCCTTGTGTCCTAAGTGTGATCGACGTCATGAAGGTCAATGCTTGGATGGCATGGGAGTATGTTTCAGATGTGGAAAGGGTGGGCACATGGCAGCAGAGTGCCCCAAAGGCATAAACTTAGATTCTAGACGGCCCTTCAGTTCAAATGAGGCCAGCACCAACAGCCAGAAGGGTTCAACCCATGCCATTACCAGCAAGAAGGCTGGTGATTCCAGTGCAGTGGTGATAGGTACATTACTTGTTCTTGGGCACTATGCTCATGTAATTTTTTATTCAGGCTTTACTCATTCATTTATATCTGATGTATTTGCTAAGCATGCCCGTATAAAGTTAGAGCCATTAGGTTTTAACCTGTTAGTTTCTACCTCGACTGGAGTAGAGTTAATAGCTACGGAGATAAAGTTAAAACCTATCAGGTGTCAGTGTCAGATCGTTTGTTAGATGTGACACTAATCGTGCTAGAGATGAGGGATTTTGATGTTATCCTGGGCATGGATTGGTTAGCCGAGAATCATGCAATCATTGATTGCCATGAGAAGTATTATTCCAGCCACTAGAAGGAGCAAGCTTCAAGTTCAGAGGGATCAAATCAGAGTCTATCCTAAGGTGGTATCTGCGTTAAAGGCAAGAAGACTCATGAGTCGAGGAGCGTGGTGCTTCTTAGCCAGTGTGTCAAATGCTCGAGTTGAAAAAACGAGAATAAGTTCTGTACTGGTGGTCAGTGAGTTTATGGATGTTTTCCCTGAAGATCTTCCAGGTTTGCCTTCGATTCGAGAAGTGGATTTCAGCATCTAG
mRNA sequence
ATGGATAAGATAAATTACTTATCACTTGTTGCATACTGTGTATCTTTTGCTTCAGCATTTTATCAAAATGAAGTGGAAGCTATTCAAAACCTCGTGGATACGATAAATTACTTATCACTTGTTGTAGATTGTTTTAAGGAAGCATTCTTCCTAAAGTATTACTCAGCGATTATCAGATACAGAAAGAAGGTAGAGTTCCTGGCCTTGAAGCATGGTGAAAGGTCAGTGGAAGAGTATGAGCTGGAGTTCAAGCAGTTATCTCGCTTTGCCTCGAAAATAGTGGACACTGAAGCAAAGAAGACGAAGAGGTTCATCTGGGGCCCCAAGGATGATGAGCAAAGAGTGGTAGGGGCTCTTGCCCTAGCTGATTATGCGGCGGCCCTTCGAGCGGCCACGTTCATGGCCATGCCAGCTACGAGTGCAACCCCGGTGGCCAAGAAGCCAGAATTCAGCGCAGGCCAAAAAAGGAAGTTTGATCGGAGTTTCTCCAAGTCGCAACAGAATTCTCAGAATCGACGATCCACGCGCCTAAGGAATGTAGGAAAGGAAAAGCCCTTGTGTCCTAAGTGTGATCGACGTCATGAAGGTCAATGCTTGGATGGCATGGGAGTATGTTTCAGATGTGGAAAGGGTGGGCACATGGCAGCAGAGTGCCCCAAAGGCATAAACTTAGATTCTAGACGGCCCTTCAGTTCAAATGAGGCCAGCACCAACAGCCAGAAGGGTTCAACCCATGCCATTACCAGCAAGAAGGCTGGTGATTCCAGTGCAGTGGTGATAGGTACATTACTTGTTCTTGGGCACTATGCTCATCCGAGAATCATGCAATCATTGATTGCCATGAGAAGTATTATTCCAGCCACTAGAAGGAGCAAGCTTCAAGTTCAGAGGGATCAAATCAGAGTCTATCCTAAGGTGGTATCTGCGTTAAAGGCAAGAAGACTCATGAGTCGAGGAGCGTGGTGCTTCTTAGCCAGTGTGTCAAATGCTCGAGTTGAAAAAACGAGAATAAGTTCTGTACTGGTGGTCAGTGAGTTTATGGATGTTTTCCCTGAAGATCTTCCAGGTTTGCCTTCGATTCGAGAAGTGGATTTCAGCATCTAG
Coding sequence (CDS)
ATGGATAAGATAAATTACTTATCACTTGTTGCATACTGTGTATCTTTTGCTTCAGCATTTTATCAAAATGAAGTGGAAGCTATTCAAAACCTCGTGGATACGATAAATTACTTATCACTTGTTGTAGATTGTTTTAAGGAAGCATTCTTCCTAAAGTATTACTCAGCGATTATCAGATACAGAAAGAAGGTAGAGTTCCTGGCCTTGAAGCATGGTGAAAGGTCAGTGGAAGAGTATGAGCTGGAGTTCAAGCAGTTATCTCGCTTTGCCTCGAAAATAGTGGACACTGAAGCAAAGAAGACGAAGAGGTTCATCTGGGGCCCCAAGGATGATGAGCAAAGAGTGGTAGGGGCTCTTGCCCTAGCTGATTATGCGGCGGCCCTTCGAGCGGCCACGTTCATGGCCATGCCAGCTACGAGTGCAACCCCGGTGGCCAAGAAGCCAGAATTCAGCGCAGGCCAAAAAAGGAAGTTTGATCGGAGTTTCTCCAAGTCGCAACAGAATTCTCAGAATCGACGATCCACGCGCCTAAGGAATGTAGGAAAGGAAAAGCCCTTGTGTCCTAAGTGTGATCGACGTCATGAAGGTCAATGCTTGGATGGCATGGGAGTATGTTTCAGATGTGGAAAGGGTGGGCACATGGCAGCAGAGTGCCCCAAAGGCATAAACTTAGATTCTAGACGGCCCTTCAGTTCAAATGAGGCCAGCACCAACAGCCAGAAGGGTTCAACCCATGCCATTACCAGCAAGAAGGCTGGTGATTCCAGTGCAGTGGTGATAGGTACATTACTTGTTCTTGGGCACTATGCTCATCCGAGAATCATGCAATCATTGATTGCCATGAGAAGTATTATTCCAGCCACTAGAAGGAGCAAGCTTCAAGTTCAGAGGGATCAAATCAGAGTCTATCCTAAGGTGGTATCTGCGTTAAAGGCAAGAAGACTCATGAGTCGAGGAGCGTGGTGCTTCTTAGCCAGTGTGTCAAATGCTCGAGTTGAAAAAACGAGAATAAGTTCTGTACTGGTGGTCAGTGAGTTTATGGATGTTTTCCCTGAAGATCTTCCAGGTTTGCCTTCGATTCGAGAAGTGGATTTCAGCATCTAG
Protein sequence
MDKINYLSLVAYCVSFASAFYQNEVEAIQNLVDTINYLSLVVDCFKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRFIWGPKDDEQRVVGALALADYAAALRAATFMAMPATSATPVAKKPEFSAGQKRKFDRSFSKSQQNSQNRRSTRLRNVGKEKPLCPKCDRRHEGQCLDGMGVCFRCGKGGHMAAECPKGINLDSRRPFSSNEASTNSQKGSTHAITSKKAGDSSAVVIGTLLVLGHYAHPRIMQSLIAMRSIIPATRRSKLQVQRDQIRVYPKVVSALKARRLMSRGAWCFLASVSNARVEKTRISSVLVVSEFMDVFPEDLPGLPSIREVDFSI
Homology
BLAST of Lag0032387 vs. NCBI nr
Match:
XP_022931734.1 (uncharacterized protein LOC111437896 [Cucurbita moschata])
HSP 1 Score: 187.2 bits (474), Expect = 2.5e-43
Identity = 137/414 (33.09%), Postives = 195/414 (47.10%), Query Frame = 0
Query: 45 FKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRF 104
FKEA+ KYY + R++ + FL LK G+++VE+Y+LEF +L+RF + V E K RF
Sbjct: 188 FKEAYLCKYYPVVARHKCQTAFLELKQGDKTVEDYDLEFNKLARFCPEYVSNEKMKIDRF 247
Query: 105 IWGPKDDEQRVVGALALADYAAALRAATFMAMP---ATSATPVAKKPEFSAGQKRKFDRS 164
I G + + Q V +DYA ALR AT M MP A PV + + GQ+R+ +R+
Sbjct: 248 IAGLRIELQGPVLVQTTSDYAVALRVATVMDMPRQVAKQNVPVV-TTQNAFGQRRRPNRN 307
Query: 165 FSKSQQNSQNRRSTRLRNVGKEKPLCPKCDRRHEGQCLDGMGVCFRCGKGGHMAAECPKG 224
+S + + R R R +P CP C + HEG+C G G CF CGK GH A+CP
Sbjct: 308 SFRSDRQPRGRFERRGRAPEYNRPECPNCKKYHEGECFAGTGGCFGCGKPGHRIADCPHK 367
Query: 225 INLDSRRP---FSSNEASTNSQKGSTHAITSKKAGDSSAVVIGTLLVLGHYAHP------ 284
N + RP + +T + HAIT++KA ++ AVV GTL +L H A
Sbjct: 368 RNHEGNRPVGQYQRGRGATQQARAVVHAITTRKAEETDAVVTGTLPILDHLAFTLFDSGT 427
Query: 285 -----------------------------------------------------RIMQSLI 344
+++ SLI
Sbjct: 428 THSFISEGFVKSANLELESLEIPLTVSTPANEATKCLTATHRVKGGSVIVAGRKLVASLI 487
Query: 345 AM-----------------RSIIPATRR---------SKLQVQRDQIRVYPKVVSALKAR 368
+ R++I R + + D R P+V++ALKAR
Sbjct: 488 VLCMQDFDVILGMDWLGENRALIDCEARKVTFRPLIGENFEFKGDISRSTPRVITALKAR 547
BLAST of Lag0032387 vs. NCBI nr
Match:
XP_031745635.1 (uncharacterized protein LOC116406054 [Cucumis sativus])
HSP 1 Score: 166.4 bits (420), Expect = 4.6e-37
Identity = 121/335 (36.12%), Postives = 175/335 (52.24%), Query Frame = 0
Query: 43 DCFKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTK 102
D FK+ F+ K++SA +R K EFL LK G +VEEY+ EF LSRFA ++V E +
Sbjct: 91 DQFKDCFYTKFFSANLRDAKSQEFLELKQGYMTVEEYDQEFDMLSRFAPELVSNEQARAD 150
Query: 103 RFIWGPKDDEQRVVGALALADYAAALRAATFMAMPATSATPVAKKPEFSAGQKRKFDR-- 162
RF+ G +D+ + V AL A ALR A M++ P + S+GQKRK ++
Sbjct: 151 RFVKGLRDEIRGFVRALKPTTQAEALRLAVDMSIGKDERQPRSFNKGSSSGQKRKVEQRT 210
Query: 163 ------------SFSKSQQNSQNRRSTRLRNVGKEKPLCPKCDRRHEGQCLDGMGVCFRC 222
SF QQ+S T +E+P+C C +RH G+CL G VC++C
Sbjct: 211 VGVPQRNMRPGDSFRSFQQSSGGAGDTT-----QERPVCDTCGKRHLGRCLMGTRVCYKC 270
Query: 223 GKGGHMAAECPKGINLDSRRPFSSNEASTNSQKGSTHAITSKKAGDSSAVVIGTLLVLGH 282
+ GHMA CP L S SS++ Q+G+ A +A + VV G + +
Sbjct: 271 KQEGHMADRCP----LRSTGAGSSSQGERPPQRGTIFATNRSEAEKAGTVVTGMDWLATN 330
Query: 283 YAHPRIMQSLIAMRSIIPATRRSKLQVQRDQIRVYPKVVSALKARRLMSRGAWCFLASVS 342
+A + + + S + + V PKV+SA+KA +L+S+G W LASV
Sbjct: 331 HASIDCSRKEV----VFSPPTASSFKFKGVGTVVLPKVISAMKASKLLSQGTWSILASVV 390
Query: 343 NARVEKTRISSVLVVSEFMDVFPEDLPGLPSIREV 364
+ R +T ++S VV E+ DVFP+DLPGLP REV
Sbjct: 391 DTREGETSLTSEPVVREYPDVFPKDLPGLPPHREV 412
BLAST of Lag0032387 vs. NCBI nr
Match:
KAA0048134.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 166.0 bits (419), Expect = 6.1e-37
Identity = 128/367 (34.88%), Postives = 190/367 (51.77%), Query Frame = 0
Query: 45 FKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRF 104
FKE F+ K++SA +++ K EFL L+ G+ +VE+Y+ EF LSRFA +V EA +T++F
Sbjct: 173 FKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDVVRDEAARTEKF 232
Query: 105 IWGPKDDEQRVVGALALADYAAALRAATFMAMPATSATPVAKKPEFSAGQKRKFDRSFSK 164
+ G + D Q +V AL + +A ALR A +++ + + A E + GQKRK +
Sbjct: 233 VRGLRLDLQGIVRALRPSTHADALRIALDLSLHERADSSKAVGRESALGQKRKVE----- 292
Query: 165 SQQNSQNRRSTRLRNVG--------------KEKPLCPKCDRRHEGQCLDGMGVCFRCGK 224
+Q + R+ RLR V +E P C C R H G+CL G GVCFRC +
Sbjct: 293 TQPDVILHRTLRLRGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQ 352
Query: 225 GGHMAAECP-KGINLDSRRPFSSNEASTNSQKGSTHAITSKKAGDSSAVVIGTLLVLGHY 284
H A CP K +PF+ SQ+G A T ++ + VV GTL +LG+Y
Sbjct: 353 PKHTADACPLKPFETTPHQPFA-------SQQGRVFATTRQETERAGTVVTGTLPILGNY 412
Query: 285 A---------HPRIMQSLI--------AMRSIIPATRRSKLQV------------QRDQI 344
A H I + + S++ + S +V + +
Sbjct: 413 AFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEEVVFNPPSGASFKFRGAGM 472
Query: 345 RVYPKVVSALKARRLMSRGAWCFLASVSNARVEKTRISSVLVVSEFMDVFPEDLPGLPSI 368
PKV+ A+KA +L+S+G W LASV + R + +SS VV E+ DVFP++LPGLP
Sbjct: 473 VCIPKVILAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPP 527
BLAST of Lag0032387 vs. NCBI nr
Match:
KAA0037906.1 (reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 164.5 bits (415), Expect = 1.8e-36
Identity = 131/406 (32.27%), Postives = 193/406 (47.54%), Query Frame = 0
Query: 45 FKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRF 104
FKE F+ K++SA +++ K EFL L+ G+ +VE+Y+ EF LSRFA +V EA +T++F
Sbjct: 147 FKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKF 206
Query: 105 IWGPKDDEQRVVGALALADYAAALRAATFMAMPATSATPVAKKPEFSAGQKRKFDRSFSK 164
+ G + D Q +V AL A +A ALR A +++P + + A + GQKRK ++
Sbjct: 207 VRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRK-----AE 266
Query: 165 SQQNSQNRRSTRLRNVGKEKPLCPKCDRRHEGQCLDGMGVCFRCGKGGHMAAECPKGINL 224
+Q R +E P C C R H G+CL G GVCFRC + GH A CP
Sbjct: 267 TQPERHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCP----- 326
Query: 225 DSRRPFSSNEASTN-SQKGSTHAITSKKAGDSSAVVIGTLLVLGHYA---------HPRI 284
R+PF + + SQ+G A T ++A + VV GTL +LGHYA H I
Sbjct: 327 --RKPFETTPPQPSASQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFI 386
Query: 285 --------------MQSLIAMRSIIPATRRSKLQVQRDQIRV------------------ 344
+ S++++ + SK Q++ ++ +
Sbjct: 387 SSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEITNRMLDVTLLVLDMQDFD 446
Query: 345 -----------------------------------------YPKVVSALKARRLMSRGAW 368
PKV+SA+KA +L+S+G W
Sbjct: 447 VIIGMDWLAANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKVISAMKASKLLSQGTW 506
BLAST of Lag0032387 vs. NCBI nr
Match:
KAA0036945.1 (gag protease polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 163.7 bits (413), Expect = 3.0e-36
Identity = 127/388 (32.73%), Postives = 193/388 (49.74%), Query Frame = 0
Query: 45 FKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRF 104
FKE F+ K++SA +++ K EFL L+ G+ +VE+Y++EF LSRFA +V EA +T++F
Sbjct: 14 FKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDVEFDMLSRFAPDVVRDEAARTEKF 73
Query: 105 IWGPKDDEQRVVGALALADYAAALRAATFMAMPATSATPVAKKPEFSAGQKRKFDRSFSK 164
+ G + D Q +V AL A +A ALR A +++ + + A S GQKRK +
Sbjct: 74 VRGLRLDLQGIVRALRSATHADALRIALDLSLHERADSSKAAGRGSSLGQKRKVELQPGV 133
Query: 165 SQQNSQNRRSTRLRN---------VGKEKPLCPKCDRRHEGQCLDGMGVCFRCGKGGHMA 224
Q + R R+ +E P+C C R H G+CL G GV FRC + GH A
Sbjct: 134 VPQRTLRSRGIFQRHQQELAAAERTLRELPVCTTCRRVHGGRCLAGSGVFFRCRQSGHTA 193
Query: 225 AECPKGINLDSRRPFSSN-EASTNSQKGSTHAITSKKAGDSSAVVIGTLLVLGHYA---- 284
CP R+PF + + SQ+G A T ++A + +V G L +LGHYA
Sbjct: 194 DACP-------RKPFETTPHQPSASQQGRVFATTRQEAERAGTMVTGMLPILGHYALVLF 253
Query: 285 -----HPRI--------------MQSLIAMRSIIPATRRSKLQVQRDQIRV--------- 344
H I + S +++ ++ SK +++ ++ +
Sbjct: 254 DSGSSHSFISSVFVQHVGLEVEPLGSALSVSTLSGEVLLSKEKIKACRVEIANHVLDVTL 313
Query: 345 -----------------------YPKVVSALKARRLMSRGAWCFLASVSNARVEKTRISS 368
PKV+SA+KA +L+S+G W LASV + R + +SS
Sbjct: 314 LVLDMPDFDVILGMDWLGTGIVCVPKVLSAMKASKLLSQGTWGILASVVDTRESEVSLSS 373
BLAST of Lag0032387 vs. ExPASy TrEMBL
Match:
A0A6J1EV26 (Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111437896 PE=4 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 1.2e-43
Identity = 137/414 (33.09%), Postives = 195/414 (47.10%), Query Frame = 0
Query: 45 FKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRF 104
FKEA+ KYY + R++ + FL LK G+++VE+Y+LEF +L+RF + V E K RF
Sbjct: 188 FKEAYLCKYYPVVARHKCQTAFLELKQGDKTVEDYDLEFNKLARFCPEYVSNEKMKIDRF 247
Query: 105 IWGPKDDEQRVVGALALADYAAALRAATFMAMP---ATSATPVAKKPEFSAGQKRKFDRS 164
I G + + Q V +DYA ALR AT M MP A PV + + GQ+R+ +R+
Sbjct: 248 IAGLRIELQGPVLVQTTSDYAVALRVATVMDMPRQVAKQNVPVV-TTQNAFGQRRRPNRN 307
Query: 165 FSKSQQNSQNRRSTRLRNVGKEKPLCPKCDRRHEGQCLDGMGVCFRCGKGGHMAAECPKG 224
+S + + R R R +P CP C + HEG+C G G CF CGK GH A+CP
Sbjct: 308 SFRSDRQPRGRFERRGRAPEYNRPECPNCKKYHEGECFAGTGGCFGCGKPGHRIADCPHK 367
Query: 225 INLDSRRP---FSSNEASTNSQKGSTHAITSKKAGDSSAVVIGTLLVLGHYAHP------ 284
N + RP + +T + HAIT++KA ++ AVV GTL +L H A
Sbjct: 368 RNHEGNRPVGQYQRGRGATQQARAVVHAITTRKAEETDAVVTGTLPILDHLAFTLFDSGT 427
Query: 285 -----------------------------------------------------RIMQSLI 344
+++ SLI
Sbjct: 428 THSFISEGFVKSANLELESLEIPLTVSTPANEATKCLTATHRVKGGSVIVAGRKLVASLI 487
Query: 345 AM-----------------RSIIPATRR---------SKLQVQRDQIRVYPKVVSALKAR 368
+ R++I R + + D R P+V++ALKAR
Sbjct: 488 VLCMQDFDVILGMDWLGENRALIDCEARKVTFRPLIGENFEFKGDISRSTPRVITALKAR 547
BLAST of Lag0032387 vs. ExPASy TrEMBL
Match:
A0A5A7TYM4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00220 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 2.9e-37
Identity = 128/367 (34.88%), Postives = 190/367 (51.77%), Query Frame = 0
Query: 45 FKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRF 104
FKE F+ K++SA +++ K EFL L+ G+ +VE+Y+ EF LSRFA +V EA +T++F
Sbjct: 173 FKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDVVRDEAARTEKF 232
Query: 105 IWGPKDDEQRVVGALALADYAAALRAATFMAMPATSATPVAKKPEFSAGQKRKFDRSFSK 164
+ G + D Q +V AL + +A ALR A +++ + + A E + GQKRK +
Sbjct: 233 VRGLRLDLQGIVRALRPSTHADALRIALDLSLHERADSSKAVGRESALGQKRKVE----- 292
Query: 165 SQQNSQNRRSTRLRNVG--------------KEKPLCPKCDRRHEGQCLDGMGVCFRCGK 224
+Q + R+ RLR V +E P C C R H G+CL G GVCFRC +
Sbjct: 293 TQPDVILHRTLRLRGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQ 352
Query: 225 GGHMAAECP-KGINLDSRRPFSSNEASTNSQKGSTHAITSKKAGDSSAVVIGTLLVLGHY 284
H A CP K +PF+ SQ+G A T ++ + VV GTL +LG+Y
Sbjct: 353 PKHTADACPLKPFETTPHQPFA-------SQQGRVFATTRQETERAGTVVTGTLPILGNY 412
Query: 285 A---------HPRIMQSLI--------AMRSIIPATRRSKLQV------------QRDQI 344
A H I + + S++ + S +V + +
Sbjct: 413 AFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEEVVFNPPSGASFKFRGAGM 472
Query: 345 RVYPKVVSALKARRLMSRGAWCFLASVSNARVEKTRISSVLVVSEFMDVFPEDLPGLPSI 368
PKV+ A+KA +L+S+G W LASV + R + +SS VV E+ DVFP++LPGLP
Sbjct: 473 VCIPKVILAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPP 527
BLAST of Lag0032387 vs. ExPASy TrEMBL
Match:
A0A5A7T6U3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00780 PE=4 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 8.6e-37
Identity = 131/406 (32.27%), Postives = 193/406 (47.54%), Query Frame = 0
Query: 45 FKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRF 104
FKE F+ K++SA +++ K EFL L+ G+ +VE+Y+ EF LSRFA +V EA +T++F
Sbjct: 147 FKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKF 206
Query: 105 IWGPKDDEQRVVGALALADYAAALRAATFMAMPATSATPVAKKPEFSAGQKRKFDRSFSK 164
+ G + D Q +V AL A +A ALR A +++P + + A + GQKRK ++
Sbjct: 207 VRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRK-----AE 266
Query: 165 SQQNSQNRRSTRLRNVGKEKPLCPKCDRRHEGQCLDGMGVCFRCGKGGHMAAECPKGINL 224
+Q R +E P C C R H G+CL G GVCFRC + GH A CP
Sbjct: 267 TQPERHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCP----- 326
Query: 225 DSRRPFSSNEASTN-SQKGSTHAITSKKAGDSSAVVIGTLLVLGHYA---------HPRI 284
R+PF + + SQ+G A T ++A + VV GTL +LGHYA H I
Sbjct: 327 --RKPFETTPPQPSASQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFI 386
Query: 285 --------------MQSLIAMRSIIPATRRSKLQVQRDQIRV------------------ 344
+ S++++ + SK Q++ ++ +
Sbjct: 387 SSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEITNRMLDVTLLVLDMQDFD 446
Query: 345 -----------------------------------------YPKVVSALKARRLMSRGAW 368
PKV+SA+KA +L+S+G W
Sbjct: 447 VIIGMDWLAANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKVISAMKASKLLSQGTW 506
BLAST of Lag0032387 vs. ExPASy TrEMBL
Match:
A0A5A7T629 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00250 PE=4 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 1.5e-36
Identity = 127/388 (32.73%), Postives = 193/388 (49.74%), Query Frame = 0
Query: 45 FKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRF 104
FKE F+ K++SA +++ K EFL L+ G+ +VE+Y++EF LSRFA +V EA +T++F
Sbjct: 14 FKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDVEFDMLSRFAPDVVRDEAARTEKF 73
Query: 105 IWGPKDDEQRVVGALALADYAAALRAATFMAMPATSATPVAKKPEFSAGQKRKFDRSFSK 164
+ G + D Q +V AL A +A ALR A +++ + + A S GQKRK +
Sbjct: 74 VRGLRLDLQGIVRALRSATHADALRIALDLSLHERADSSKAAGRGSSLGQKRKVELQPGV 133
Query: 165 SQQNSQNRRSTRLRN---------VGKEKPLCPKCDRRHEGQCLDGMGVCFRCGKGGHMA 224
Q + R R+ +E P+C C R H G+CL G GV FRC + GH A
Sbjct: 134 VPQRTLRSRGIFQRHQQELAAAERTLRELPVCTTCRRVHGGRCLAGSGVFFRCRQSGHTA 193
Query: 225 AECPKGINLDSRRPFSSN-EASTNSQKGSTHAITSKKAGDSSAVVIGTLLVLGHYA---- 284
CP R+PF + + SQ+G A T ++A + +V G L +LGHYA
Sbjct: 194 DACP-------RKPFETTPHQPSASQQGRVFATTRQEAERAGTMVTGMLPILGHYALVLF 253
Query: 285 -----HPRI--------------MQSLIAMRSIIPATRRSKLQVQRDQIRV--------- 344
H I + S +++ ++ SK +++ ++ +
Sbjct: 254 DSGSSHSFISSVFVQHVGLEVEPLGSALSVSTLSGEVLLSKEKIKACRVEIANHVLDVTL 313
Query: 345 -----------------------YPKVVSALKARRLMSRGAWCFLASVSNARVEKTRISS 368
PKV+SA+KA +L+S+G W LASV + R + +SS
Sbjct: 314 LVLDMPDFDVILGMDWLGTGIVCVPKVLSAMKASKLLSQGTWGILASVVDTRESEVSLSS 373
BLAST of Lag0032387 vs. ExPASy TrEMBL
Match:
A0A5A7UJ81 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00550 PE=4 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 4.2e-36
Identity = 132/415 (31.81%), Postives = 195/415 (46.99%), Query Frame = 0
Query: 45 FKEAFFLKYYSAIIRYRKKVEFLALKHGERSVEEYELEFKQLSRFASKIVDTEAKKTKRF 104
FKE+F+ K++SA +++ K EFL L+ G+ +VE+Y+ EF LSRFA +V EA +T++F
Sbjct: 176 FKESFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKF 235
Query: 105 IWGPKDDEQRVVGALALADYAAALRAATFMAMPATSATPVAKKPEFSAGQKRKFDRSFSK 164
+ G + D Q +V AL A +A ALR A +++P + + A + GQKRK +
Sbjct: 236 VRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSTLGQKRKVETQLDV 295
Query: 165 SQQNSQ------NRRSTRLRNVGK---EKPLCPKCDRRHEGQCLDGMGVCFRCGKGGHMA 224
+ Q + R L G+ E P C C R H G+CL G GVCFRC + GH A
Sbjct: 296 APQRTLRSGGVFQRHRRELAAAGRTLGELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTA 355
Query: 225 AECPKGINLDSRRPFSSNEASTN-SQKGSTHAITSKKAGDSSAVVIGTLLVLGHYA---- 284
CP R+PF + + +Q+G A T ++A + VV GTL +LGHYA
Sbjct: 356 DVCP-------RKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLF 415
Query: 285 -----HPRI--------------MQSLIAMRSIIPATRRSKLQVQRDQIRV--------- 344
H I + S++++ + SK Q++ ++ +
Sbjct: 416 DSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTL 475
Query: 345 --------------------------------------------------YPKVVSALKA 368
PKV+SA+KA
Sbjct: 476 LVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKA 535
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EV26 | 1.2e-43 | 33.09 | Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111437896 PE=4 SV=1 | [more] |
A0A5A7TYM4 | 2.9e-37 | 34.88 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7T6U3 | 8.6e-37 | 32.27 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36... | [more] |
A0A5A7T629 | 1.5e-36 | 32.73 | Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A5A7UJ81 | 4.2e-36 | 31.81 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31... | [more] |
Match Name | E-value | Identity | Description | |