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Lag0032371 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAATTCTCCGGGATTCCATGGTAATTTCCACCACTATAAATCCATCCCGAACGCATCCCCTTTTTCCAATCTCACAGAAAATGGAACTACGAGAAGAAGAAGAAGACGATTTCTCACCGTTAAACTTGATCCAACACCATCTTCTCCAAGACTCCGATTCCTTCCTCACTCTTCTAGATTTCGATTTCCAGTACTCGCCATCCGCCTTCTTCTCGCTCCCGCCGATCAAACTCGAATTCGACGATTTCGAGTACATGAAACCGTCGGAAGAGGAAGAGCCTCCGATTGAGAGTCCGAAGAGGCACCGAGCGGAACAGTGGACACCGACTGGGAGGAGGTACAGAGGCGTACGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGAGATCCGAGTAGGAAAGGGAGCAGAGTTTGGTTGGGGACTTTCGATTCGGATGTGGATGCGGCTAGGGCTTATGATTCTGCTGCGTTTAAGATGAGAGGAAGAAAGGCTAAGTTGAATTTTCCCTTGGATGCCGGAAAGTCCGACCCACCGCTGGGGAATGGCCGGAAGAAGAGGAGAGAGATCACAGTAGATTGA ATGGTAATTCTCCGGGATTCCATGGTAATTTCCACCACTATAAATCCATCCCGAACGCATCCCCTTTTTCCAATCTCACAGAAAATGGAACTACGAGAAGAAGAAGAAGACGATTTCTCACCGTTAAACTTGATCCAACACCATCTTCTCCAAGACTCCGATTCCTTCCTCACTCTTCTAGATTTCGATTTCCAGTACTCGCCATCCGCCTTCTTCTCGCTCCCGCCGATCAAACTCGAATTCGACGATTTCGAGTACATGAAACCGTCGGAAGAGGAAGAGCCTCCGATTGAGAGTCCGAAGAGGCACCGAGCGGAACAGTGGACACCGACTGGGAGGAGGTACAGAGGCGTACGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGAGATCCGAGTAGGAAAGGGAGCAGAGTTTGGTTGGGGACTTTCGATTCGGATGTGGATGCGGCTAGGGCTTATGATTCTGCTGCGTTTAAGATGAGAGGAAGAAAGGCTAAGTTGAATTTTCCCTTGGATGCCGGAAAGTCCGACCCACCGCTGGGGAATGGCCGGAAGAAGAGGAGAGAGATCACAGTAGATTGA ATGGTAATTCTCCGGGATTCCATGGTAATTTCCACCACTATAAATCCATCCCGAACGCATCCCCTTTTTCCAATCTCACAGAAAATGGAACTACGAGAAGAAGAAGAAGACGATTTCTCACCGTTAAACTTGATCCAACACCATCTTCTCCAAGACTCCGATTCCTTCCTCACTCTTCTAGATTTCGATTTCCAGTACTCGCCATCCGCCTTCTTCTCGCTCCCGCCGATCAAACTCGAATTCGACGATTTCGAGTACATGAAACCGTCGGAAGAGGAAGAGCCTCCGATTGAGAGTCCGAAGAGGCACCGAGCGGAACAGTGGACACCGACTGGGAGGAGGTACAGAGGCGTACGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGAGATCCGAGTAGGAAAGGGAGCAGAGTTTGGTTGGGGACTTTCGATTCGGATGTGGATGCGGCTAGGGCTTATGATTCTGCTGCGTTTAAGATGAGAGGAAGAAAGGCTAAGTTGAATTTTCCCTTGGATGCCGGAAAGTCCGACCCACCGCTGGGGAATGGCCGGAAGAAGAGGAGAGAGATCACAGTAGATTGA MVILRDSMVISTTINPSRTHPLFPISQKMELREEEEDDFSPLNLIQHHLLQDSDSFLTLLDFDFQYSPSAFFSLPPIKLEFDDFEYMKPSEEEEPPIESPKRHRAEQWTPTGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSDPPLGNGRKKRREITVD Homology
BLAST of Lag0032371 vs. NCBI nr
Match: XP_038877107.1 (ethylene-responsive transcription factor ERF106 [Benincasa hispida]) HSP 1 Score: 255.4 bits (651), Expect = 4.0e-64 Identity = 137/174 (78.74%), Postives = 147/174 (84.48%), Query Frame = 0
BLAST of Lag0032371 vs. NCBI nr
Match: XP_008436978.1 (PREDICTED: ethylene-responsive transcription factor ERF106-like [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 3.9e-59 Identity = 133/196 (67.86%), Postives = 149/196 (76.02%), Query Frame = 0
BLAST of Lag0032371 vs. NCBI nr
Match: XP_022957677.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita moschata] >XP_022957678.1 ethylene-responsive transcription factor ERF106-like [Cucurbita moschata]) HSP 1 Score: 236.1 bits (601), Expect = 2.5e-58 Identity = 132/184 (71.74%), Postives = 146/184 (79.35%), Query Frame = 0
BLAST of Lag0032371 vs. NCBI nr
Match: XP_022928835.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita moschata] >KAG7017087.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 235.0 bits (598), Expect = 5.7e-58 Identity = 119/158 (75.32%), Postives = 130/158 (82.28%), Query Frame = 0
BLAST of Lag0032371 vs. NCBI nr
Match: KAG7035552.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 233.8 bits (595), Expect = 1.3e-57 Identity = 131/184 (71.20%), Postives = 145/184 (78.80%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy Swiss-Prot
Match: Q9FKG2 (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 GN=ERF107 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.2e-31 Identity = 89/186 (47.85%), Postives = 109/186 (58.60%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy Swiss-Prot
Match: Q9LY05 (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 GN=ERF106 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.6e-31 Identity = 83/181 (45.86%), Postives = 104/181 (57.46%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy Swiss-Prot
Match: O80341 (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.0e-25 Identity = 74/155 (47.74%), Postives = 95/155 (61.29%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy Swiss-Prot
Match: Q8VY90 (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 8.6e-25 Identity = 74/171 (43.27%), Postives = 97/171 (56.73%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy Swiss-Prot
Match: Q40478 (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 8.0e-23 Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy TrEMBL
Match: A0A1S3ASX7 (ethylene-responsive transcription factor ERF106-like OS=Cucumis melo OX=3656 GN=LOC103482546 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59 Identity = 133/196 (67.86%), Postives = 149/196 (76.02%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy TrEMBL
Match: A0A6J1H0X6 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=3662 GN=LOC111459141 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58 Identity = 132/184 (71.74%), Postives = 146/184 (79.35%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy TrEMBL
Match: A0A6J1ESN1 (ethylene-responsive transcription factor ERF106-like OS=Cucurbita moschata OX=3662 GN=LOC111435630 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 2.7e-58 Identity = 119/158 (75.32%), Postives = 130/158 (82.28%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy TrEMBL
Match: A0A5A7UNP1 (Ethylene-responsive transcription factor ERF106-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00050 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 2.0e-56 Identity = 123/173 (71.10%), Postives = 137/173 (79.19%), Query Frame = 0
BLAST of Lag0032371 vs. ExPASy TrEMBL
Match: E5GCU9 (AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 2.0e-56 Identity = 123/173 (71.10%), Postives = 137/173 (79.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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