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Lag0032347 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTGGCAATGAAGAAGTGTGTGGTGCCTGCCACACATATCAACACAACAAATCTCTGGTTGCCTCTCCATCTAGACTCCTACAACCCCTACCCATTTCGAATCAAATATGGGAAGATGTATGGATGGACTTTGTTGAGGGATTGCCTCGCTCGATGGGAAATGAAAAGGGTTTTGGTTGTGGTAGACCGCCTTAGCAAGTATGCCCGTATTCTAGCTTTGAGCCATTCATTCTCATAAAAATCTATGGTCACCCAATTCATCAAAGAGATTGTTTGCCTCCACAGGTTCCCTTGAACTATAGTATTCGACAAGGACAAGGTATTTATCAACCACTTATGGAGTGGCTCCAAGCAACTCATCTTCGACAAAGCACTGCATACGACCCACAAACTAACAAACAAACGAAGATAGCAAACAAATGCTTCGGGACTTATTTAAGATGCTTTTGTAATGAACAGCCCAAGCAATGGATGCAGTGGTTATCGTGGACGAACTACTGGTATACCACCTCACTAAGAAGCACAAACACTGACACGCGACACGGACACGGACATGGCGACACGTCAATTTTCAAAAAAGTAGGACACGACACGTTGGGGACACGTTAATTTTTTAGAAAAAAAAAAACACATATATGTGTGCATATTTTGACATTATGAATATCTAATACTTTTAATGTAAATTTCCTCTATATTTAAACATTAAAACAAGTAAACAACAACCATACAATTCATTAAAAAACAAGAGATTAACCAACAACATCATCAACAATATCCAAGATCCAATAAGTTTTACATAAAAGAAATACAAAATCAACAATATCAAAGCTCCAATAAGTTTTACACAAAAGAAATACAAAATAGAATCAAACAGGCTTTCTACATATTTTTCTCATTCTTGTGGAGGTCGAGACTTGGTTGCTTCTATCTTGGAGTCACTTTCAACTCACAGAATGTTGGAGAGATGGAGAAGAAATCGTGTGGAAGACAGGCGTGGGGAAGAAGATGAGAAGACTTAAAAGTTAAAACTGACCTAGGGCAGATTAAAAATTCAAAAAAAAAACAAAAAACAAAATGGCTCTTTTTTAAACGGTAAGAGTTTTTTTTACCGTGGGTCAGGGTTGTGAATGAGTGGGCTTGGACTATCTATAAGTGGGTCTAATTTAAACCGTGATTAAAATTTTAAAAAACGATCATTTTTTTCTAAAACGTGTCGGAGCCGTGTCGAAAAATTAAAAAAAATTAAAAAAAATATAAGGCACGCCAGGTGGCATGTCGGACACGTGTCGGAGGCGTGTCGGAGGCGTGTCGGAGGCGTGTCGGGGTCGGACACGTGTCCGACACTAACACTTCATCATTTTAGAGGTGTCTGTGCTTTATAGCCTCACATCACACTCCCTTAATACTACAACGTTTCATGTGATTTATGGTCAAGCACCATCGTCGTTATTATCATATGGAGAATTGAAAACTTCCAACGTTACTCTTGAGCAGCAATTTGAGGAACGAAACGAAGCCCTTAATGCACTAAAGGAGCAGTTGAATATCGCCCAAGAAAGAATTAAAAAATATGTTGATATCAACCGTCAAAAAGTTGAATTTGTCATCAAAGACTAG ATGAAAGTGGCAATGAAGAAGTGTGTGGTGCCTGCCACACATATCAACACAACAAATCTCTGGTTGCCTCTCCATCTAGACTCCTACAACCCCTACCCATTTCGAATCAAATATGGGAAGATGTATGGATGGACTTTGTTGAGGGATTGCCTCGCTCGATGGGAAATGAAAAGGGTTTTGGTTGTGGTAGACCGCCTTAGCAACCCAAGCAATGGATGCAGTGGTTATCGTGGACGAACTACTGAGGTGTCTGTGCTTTATAGCCTCACATCACACTCCCTTAATACTACAACGTTTCATGTGATTTATGGTCAAGCACCATCGTCGTTATTATCATATGGAGAATTGAAAACTTCCAACGTTACTCTTGAGCAGCAATTTGAGGAACGAAACGAAGCCCTTAATGCACTAAAGGAGCAGTTGAATATCGCCCAAGAAAGAATTAAAAAATATGTTGATATCAACCGTCAAAAAGTTGAATTTGTCATCAAAGACTAG ATGAAAGTGGCAATGAAGAAGTGTGTGGTGCCTGCCACACATATCAACACAACAAATCTCTGGTTGCCTCTCCATCTAGACTCCTACAACCCCTACCCATTTCGAATCAAATATGGGAAGATGTATGGATGGACTTTGTTGAGGGATTGCCTCGCTCGATGGGAAATGAAAAGGGTTTTGGTTGTGGTAGACCGCCTTAGCAACCCAAGCAATGGATGCAGTGGTTATCGTGGACGAACTACTGAGGTGTCTGTGCTTTATAGCCTCACATCACACTCCCTTAATACTACAACGTTTCATGTGATTTATGGTCAAGCACCATCGTCGTTATTATCATATGGAGAATTGAAAACTTCCAACGTTACTCTTGAGCAGCAATTTGAGGAACGAAACGAAGCCCTTAATGCACTAAAGGAGCAGTTGAATATCGCCCAAGAAAGAATTAAAAAATATGTTGATATCAACCGTCAAAAAGTTGAATTTGTCATCAAAGACTAG MKVAMKKCVVPATHINTTNLWLPLHLDSYNPYPFRIKYGKMYGWTLLRDCLARWEMKRVLVVVDRLSNPSNGCSGYRGRTTEVSVLYSLTSHSLNTTTFHVIYGQAPSSLLSYGELKTSNVTLEQQFEERNEALNALKEQLNIAQERIKKYVDINRQKVEFVIKD Homology
BLAST of Lag0032347 vs. NCBI nr
Match: KAA0041764.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa] >TYK27054.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 3.7e-10 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of Lag0032347 vs. NCBI nr
Match: TYK23090.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 1.4e-09 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Lag0032347 vs. NCBI nr
Match: TYK15990.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 1.4e-09 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Lag0032347 vs. NCBI nr
Match: KAA0049776.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 1.4e-09 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Lag0032347 vs. NCBI nr
Match: KAA0049630.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 1.4e-09 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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