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Lag0032342 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCTCTAAGGGCGTCATATGGAGGAAGCTCGTCGGATGAAGAAGCGGAAATACTCTCTCCTTCCCCTTCATCAGCTTCACCTTCAGTTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCCATCCTCCAAATTCCATATGTAATGTTCTTCTTCCTCCTTACTTTTTATATATTCTTCGTTTCTTACTCCATTGCCTCGCACATTAACTCTTTCACTATTTTCATTTTCTTGTTTAGCCGATTTGAGTGATTCCCCATTCACTCTGCCCAGTAGAGTTCGGAGCTTCCCTCATGTTGAAGGAAACTTTGCCCTACACCTCTATATCCCAGGTCATCAATTCCATTCTTAAACCTACTTTTCTGTTTTTTATTTTAAGTCTTACTGAAGGGGCTTTTGTTTTTGTTTTCTTGCATTTTCAGAAATTTTGGGTTACTCTTTGTTGGCATATTACTAGTTGGAAGTTTTGGCTATGATTCTATTCCTAGGGAGCTTTTCTTTTTTCTTTCCTTTCCTGTTGATCATTGATTTATTTTTAGAGGAGGAGGTTCTTTCAGTCCAGATTGGAATCAATGTCTAA ATGGATGCTCTAAGGGCGTCATATGGAGGAAGCTCGTCGGATGAAGAAGCGGAAATACTCTCTCCTTCCCCTTCATCAGCTTCACCTTCAGTTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCCATCCTCCAAATTCCATATCCGATTTGAGTGATTCCCCATTCACTCTGCCCAGTAGAGTTCGGAGCTTCCCTCATGTTGAAGGAAACTTTGCCCTACACCTCTATATCCCAGAGGAGGAGGTTCTTTCAGTCCAGATTGGAATCAATGTCTAA ATGGATGCTCTAAGGGCGTCATATGGAGGAAGCTCGTCGGATGAAGAAGCGGAAATACTCTCTCCTTCCCCTTCATCAGCTTCACCTTCAGTTTTACCTCTGCCTCCACCGCCTCTCTCACTTCTCCATCCTCCAAATTCCATATCCGATTTGAGTGATTCCCCATTCACTCTGCCCAGTAGAGTTCGGAGCTTCCCTCATGTTGAAGGAAACTTTGCCCTACACCTCTATATCCCAGAGGAGGAGGTTCTTTCAGTCCAGATTGGAATCAATGTCTAA MDALRASYGGSSSDEEAEILSPSPSSASPSVLPLPPPPLSLLHPPNSISDLSDSPFTLPSRVRSFPHVEGNFALHLYIPEEEVLSVQIGINV Homology
BLAST of Lag0032342 vs. NCBI nr
Match: XP_038875355.1 (U6 snRNA phosphodiesterase isoform X2 [Benincasa hispida]) HSP 1 Score: 98.2 bits (243), Expect = 3.9e-17 Identity = 57/89 (64.04%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of Lag0032342 vs. NCBI nr
Match: XP_022155865.1 (U6 snRNA phosphodiesterase [Momordica charantia]) HSP 1 Score: 98.2 bits (243), Expect = 3.9e-17 Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of Lag0032342 vs. NCBI nr
Match: XP_038875354.1 (U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]) HSP 1 Score: 98.2 bits (243), Expect = 3.9e-17 Identity = 57/89 (64.04%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of Lag0032342 vs. NCBI nr
Match: XP_008467330.1 (PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of Lag0032342 vs. NCBI nr
Match: KAA0055091.1 (U6 snRNA phosphodiesterase [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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