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Lag0032337 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGACCAATCACACCCCAAGGTGATTGGTGGCGACTCCAAACCTCTCCTCTCGAAAGAGACCCTTAGGAAAGGACGTCGGCCGCTTCGCGTCGCGATGACGTTGCGACAAAGACAACAGTGGCAACTGGAGAAAAGGACAACGACGATTTGCGTAGATGCGATTGCGAGTGGAGAAGGCTCAACACATTTATACATAGTAAGGGCACGACGGGAAATGAAATGTGTGAAATGAGAAGGGGATTAGGGTTTCTTTAAGGGTGTATATATACCCTCGGCTTGGGTCGGTTTTTTGTTGGTTTGTTCAATAGAAAACCGAACCAACTCGAAATTAAATGTTCGTTTTTTTTTAAACAAATCGAGATGTTCAATATAATGCCAAAAAAAAAAACGAACCAAACCACTGGATCAACTCGTTTGGTTTGGTTTTTCGGTTTTGAGTTGCACCCCATCGTGCGCTAAATGCACCCAGCCCCACCCCACCGTGTATGTTTCACAGTCGTGTCGCCCACTCTCTCCAAGCCTTCAAGCAGTTGCTTGAGGATGACAAGCAACACCACAACATCCCATGTCTGACGAGATTCATGTCGTGCACCCAAAGGCACTCAGTCCCACCTGACCATGCACGTTGAGCAAACTAAATTCTTCCTAGATTTATGGTGATCATTTTTCAATAAAATTTTGTTTTAGCTGTTGTTGAGAATGAGAGTTAAGTGTAAAGTTTCGTTTCAATTTTCATTATTTTATATTTTAAAAAACAAGAAAAGTGAAAAAATAATAATAATAAAATGGTTGTCATCCCTCCCCAGATTAATTTCCCAAAACCATTCAATCCTCCTTGAAATCACTATCCATTTTTCCCCCAAAACAACTCTCCATATTTTGCCAAAATCTCTCATACCTTTACTTTCCCTCATTCACTCTCCAAAAAATAATCATTCATATTCCGTATATATCAAAACTTGTGATTCGCCCTTGAAAATGAAATAATCTATAAATATATTCCACAGACAATTGCATTTCAATTGTATAAGTAACATGAATGATAGTAACTATTCGGAGCATAGTTTAGTGGATAAAGACGTCAATGTTTGTGTAGAAAAAAAAATAGAAGAAATAATAGAAAAACCCTTAAGAGAGGGATTGGTAGTACATTTTGAGAAACTAAGTGAACTACTTGTCTAGCCAATTCAGATGGTCAAGATTTAGTTTCAACTCGAGGCCATTGATGGAGAGATAATCGACCATCTTAGGAATACAGGATTTGAGAGTTGCAGCATATTCCTATAGAATAAAACAAAGCAGAAGGAGATAATTAATTAGGTTTTGAGAATGTTGAAATTAATAAAATAAACGAGGCATAAACAATGATGAATTATTTAATTATAAATTGTATACCCGTTTTTTTTAACATTTCTTGGAGTTTTATATGTTCCGCAGACCACTCTTCCATGAGCCTTTGGATCAAAATCATAAGTTCCTCCGGCCACTCCATGCTGACGTCTTGGTGTTGTATCACCACCCGACCGTTACTTGGGTTAAACTGAAACTCAAGTCGTCATACCTGATTATGGTGTTGAGGATCCATTGTCTTATCGTCAGGCAATGAATGATGTGGATAAAGATCAATGGATCAAATCATTGGACCTTGAGATGGAGTCTATGTACTTCAATCAAGTTTGGGAACTTGTAGATCCACCTGTCGCTACGGGTTTGCGACGCGGAGCGGCCGACTTTGTTCCCAAAAGAAGGAAAATGGAGTCGCCACCAGTCTTGATTTAG ATGGGTGACCAATCACACCCCAAGGTGATTGGTGGCGACTCCAAACCTCTCCTCTCGAAAGAGACCCTTAGGAAAGGACGTCGGCCGCTTCGCGTCGCGATGACGTTGCGACAAAGACAACAGTGGCAACTGGAGAAAAGGACAACGACGATTTGCGTAGATGCGATTGCGAGTGGAGAAGGCTCAACACATTTATACATAGCAATGAATGATGTGGATAAAGATCAATGGATCAAATCATTGGACCTTGAGATGGAGTCTATGTACTTCAATCAAGTTTGGGAACTTGTAGATCCACCTGTCGCTACGGGTTTGCGACGCGGAGCGGCCGACTTTGTTCCCAAAAGAAGGAAAATGGAGTCGCCACCAGTCTTGATTTAG ATGGGTGACCAATCACACCCCAAGGTGATTGGTGGCGACTCCAAACCTCTCCTCTCGAAAGAGACCCTTAGGAAAGGACGTCGGCCGCTTCGCGTCGCGATGACGTTGCGACAAAGACAACAGTGGCAACTGGAGAAAAGGACAACGACGATTTGCGTAGATGCGATTGCGAGTGGAGAAGGCTCAACACATTTATACATAGCAATGAATGATGTGGATAAAGATCAATGGATCAAATCATTGGACCTTGAGATGGAGTCTATGTACTTCAATCAAGTTTGGGAACTTGTAGATCCACCTGTCGCTACGGGTTTGCGACGCGGAGCGGCCGACTTTGTTCCCAAAAGAAGGAAAATGGAGTCGCCACCAGTCTTGATTTAG MGDQSHPKVIGGDSKPLLSKETLRKGRRPLRVAMTLRQRQQWQLEKRTTTICVDAIASGEGSTHLYIAMNDVDKDQWIKSLDLEMESMYFNQVWELVDPPVATGLRRGAADFVPKRRKMESPPVLI Homology
BLAST of Lag0032337 vs. NCBI nr
Match: KAA0025358.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.1 bits (170), Expect = 1.6e-08 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of Lag0032337 vs. NCBI nr
Match: TYK04171.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.1 bits (170), Expect = 1.6e-08 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of Lag0032337 vs. NCBI nr
Match: KAA0052796.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 69.7 bits (169), Expect = 2.0e-08 Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of Lag0032337 vs. NCBI nr
Match: TYK04889.1 (retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 69.3 bits (168), Expect = 2.7e-08 Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of Lag0032337 vs. NCBI nr
Match: KAA0047674.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK08329.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 68.9 bits (167), Expect = 3.5e-08 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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