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Lag0032299 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCATATCAGTTCTTGTTGTTGCTCGCGCTCTTGCTTGTTACCTCCTTCGACATGTCAATGGCTAAAGGCAAGTTTGGAAAAAACAAAAACGCCGACATATATCCCAAGTTCCCGAGCGGGCCACCGCGCGGAACTCTCGTTGCCCTCCGCGATTATACCGTCGAGATTCACAATGAATTGAAAACTTTCGTGTTGACTACCCATTGCCGCTCCAAAGATGATGATTTAAGTGTGCATGTGATTAACCCAAATGAGCAACAAGATTGGTCGTTCAGAGGGAATTGGTTGGGCACCACCAGATTTTATTGCAAATTCCAGTGGCAATATGGATTTTTAGAATTTGATGTTTTTTATAACAATGCAGACTTCTTGACTAATTTTTGCGGCGACTCAACATGCGCTTGGAGTGCGAGACAAGATGGGATGTATTTGAAGAACAAAAATGGTCAGTTTGAATTTAGAGATTATTGGGAAATGGTTGTATAA ATGAAAGCATATCAGTTCTTGTTGTTGCTCGCGCTCTTGCTTGTTACCTCCTTCGACATGTCAATGGCTAAAGGCAAGTTTGGAAAAAACAAAAACGCCGACATATATCCCAAGTTCCCGAGCGGGCCACCGCGCGGAACTCTCGTTGCCCTCCGCGATTATACCGTCGAGATTCACAATGAATTGAAAACTTTCGTGTTGACTACCCATTGCCGCTCCAAAGATGATGATTTAAGTGTGCATGTGATTAACCCAAATGAGCAACAAGATTGGTCGTTCAGAGGGAATTGGTTGGGCACCACCAGATTTTATTGCAAATTCCAGTGGCAATATGGATTTTTAGAATTTGATGTTTTTTATAACAATGCAGACTTCTTGACTAATTTTTGCGGCGACTCAACATGCGCTTGGAGTGCGAGACAAGATGGGATGTATTTGAAGAACAAAAATGGTCAGTTTGAATTTAGAGATTATTGGGAAATGGTTGTATAA ATGAAAGCATATCAGTTCTTGTTGTTGCTCGCGCTCTTGCTTGTTACCTCCTTCGACATGTCAATGGCTAAAGGCAAGTTTGGAAAAAACAAAAACGCCGACATATATCCCAAGTTCCCGAGCGGGCCACCGCGCGGAACTCTCGTTGCCCTCCGCGATTATACCGTCGAGATTCACAATGAATTGAAAACTTTCGTGTTGACTACCCATTGCCGCTCCAAAGATGATGATTTAAGTGTGCATGTGATTAACCCAAATGAGCAACAAGATTGGTCGTTCAGAGGGAATTGGTTGGGCACCACCAGATTTTATTGCAAATTCCAGTGGCAATATGGATTTTTAGAATTTGATGTTTTTTATAACAATGCAGACTTCTTGACTAATTTTTGCGGCGACTCAACATGCGCTTGGAGTGCGAGACAAGATGGGATGTATTTGAAGAACAAAAATGGTCAGTTTGAATTTAGAGATTATTGGGAAATGGTTGTATAA MKAYQFLLLLALLLVTSFDMSMAKGKFGKNKNADIYPKFPSGPPRGTLVALRDYTVEIHNELKTFVLTTHCRSKDDDLSVHVINPNEQQDWSFRGNWLGTTRFYCKFQWQYGFLEFDVFYNNADFLTNFCGDSTCAWSARQDGMYLKNKNGQFEFRDYWEMVV Homology
BLAST of Lag0032299 vs. NCBI nr
Match: XP_023546843.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.0 bits (445), Expect = 2.6e-40 Identity = 80/156 (51.28%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of Lag0032299 vs. NCBI nr
Match: KAE8648167.1 (hypothetical protein Csa_018435 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 3.4e-40 Identity = 80/160 (50.00%), Postives = 111/160 (69.38%), Query Frame = 0
BLAST of Lag0032299 vs. NCBI nr
Match: XP_022942056.1 (S-protein homolog 1-like [Cucurbita moschata]) HSP 1 Score: 172.2 bits (435), Expect = 3.8e-39 Identity = 80/156 (51.28%), Postives = 110/156 (70.51%), Query Frame = 0
BLAST of Lag0032299 vs. NCBI nr
Match: KAG6600848.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169.5 bits (428), Expect = 2.4e-38 Identity = 78/156 (50.00%), Postives = 110/156 (70.51%), Query Frame = 0
BLAST of Lag0032299 vs. NCBI nr
Match: XP_008453055.1 (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]) HSP 1 Score: 169.1 bits (427), Expect = 3.2e-38 Identity = 72/135 (53.33%), Postives = 94/135 (69.63%), Query Frame = 0
BLAST of Lag0032299 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.9e-11 Identity = 44/141 (31.21%), Postives = 66/141 (46.81%), Query Frame = 0
BLAST of Lag0032299 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 4.2e-09 Identity = 29/77 (37.66%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of Lag0032299 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09 Identity = 36/113 (31.86%), Postives = 59/113 (52.21%), Query Frame = 0
BLAST of Lag0032299 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.6e-08 Identity = 30/89 (33.71%), Postives = 43/89 (48.31%), Query Frame = 0
BLAST of Lag0032299 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.7e-08 Identity = 35/104 (33.65%), Postives = 55/104 (52.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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