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Lag0032295 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTGGAACTTTCCAAGTGGCTTAACTCTGATATTGAGGAGATAAAAGTGATGGCATCAAGAATGATTGCTAAGTTTGAAAAATATTGGAGTGTGATTCATGGTGTTTTGGCAGTAGCTACAGTATTAGATCCTAGATTTAAGATGAGATTGATCGAGTTTTATTTTCCTTAAATCTATGGATCTCACTATACTGTTGAAATTCAACGTGTTCAAGATATGTGCAATGATTTAGTGAAGTACTATATATTAAATTCAAGTACAGAAGTTGAATCTTCATGTTCTACAATAAGTTCTTCAACTTTCAAGCGAGATGTGAGTAGTCATAGCTCTATCATTCAGAAGAAAGATCGGTTTCTCAAGTTTGATGAGTTTGTTAATAATACTGCAAATGCTGATAATGTCAAATCAGAGCTGGATCTTTATTTAGAGGAAAATCTTTTACCACGATCAGATGATTTTGAAATTTTGAGTTGGTGGAAGTTAAATGGGGTAAAGTATCATATTTTGTATCAAATTGCCAAAGATATTTTAGTTGTTCTGTTACTATTGTTGCTTCATAGTCTGCATTTAGTATTGGTGGTAGGCATGTCGGTCCACATTGTTCTAGAATTCATGTCATCTTACTGGAAGCTTTGATGTGTGCTCAAGATTGACTTTGGGCTGAAGGTATGAGTATGTATTATTAATTTACTTCTTTAATTTGTTTTCTTATTACTATTTAAGAAGTTTTATTTGTACTTGTCTTAAATAGATACACATACTACTATATATGCAAAAGTATTGGAAACTGTTATGGAGGATCGTGATCCAAAAGATGCGGTAAATAATTAGTTTGTGTATTCTAATTAATTTTTTTATTATTGATTTATAATAACAGTTTTCTTTTTCTTTTCTTTTTTTTTCCGGAATCATGTGTTACAAGTTTGGATGACTAAAGAAGGACATTTATGGCTTTGTTGTTGTTTGTGTTGGAATTTTGTTATATTTAAGACTATGTTGTAATTGTGTAATATTTAAGACTGTTGTAATTGTGTAATATTTAAGAATGTTGTAATTGTCTAATATTTAAGACTTGACTTTGTATTCATGCTTTGTTATTGTTTAATGTTGTAACTTTGTTATATTTAAGACTATGTTGTAATTGTGTAATATTTAAGTTGAAAATTATATTTAAACTTTTATAAATGATGTTTGAAGGTTTTAAACTCTATTATAAAATATTATTGTTCTTATCATAGGATAATTCATAGATCTTTAAAAAAAATAGCAGTTTATTGGCATTTAATAAAAATTAAAAAAAAACGGAGAAAAATTCCCCGCGGGGAATCCTTGCCCTGATCCTCGCAAGATTAAATGGGGAATTTTGCGAGGATGGGGAATGATTTAGGGGGTGGGGACAGGGACGGGGAAGGCTTCCCTGTCCCCGCCCCGCCCCGTGAACATCCTTAGTCGTCTAGCATATTCCACAACTTTAGAATCTATAAAGAAGACTATAAAGAATTTGGATGCGTTGGTAGTAGGAATAGTTGGATTCCCACATGCACTGTTGGTCTGGGCATATGAGTGCATCCCTCTCCTATCTGGACCCACGATGATTTGTGCCCAAAAGGTGTCAAGAGAGATGCCCAAAATGATCAACTGGGTTGCTGATTGCCATCTAGAGTGGAAGGACTTGGCAATTAAGGTCTTCGAGAAGGAAAATATAAGTATAAATATGTATTTTTTCATATATACCCCTGAATGAATTATATATGTATATTTATTTGATAACATGTGTTTCAGTTTGAGTTCTATGAGATGATGGATGAAAGAGAAGAAGCTTTGTTCCATGGTGGGAACAACTGA TTGGAACTTTCCAAGTGGCTTAACTCTGATATTGAGGAGATAAAAGTGATGGCATCAAGAATGATTGCTAAGTTTGAAAAATATTGGAGTGTGATTCATGGTGTTTTGGCACGAGATGTGAGTAGTCATAGCTCTATCATTCAGAAGAAAGATCGGTTTCTCAAGTTTGATGAGTTTGTTAATAATACTGCAAATGCTGATAATGTCAAATCAGAGCTGGATCTTTATTTAGAGGAAAATCTTTTACCACGATCAGATGATTTTGAAATTTTGAGTTGGTGGAAGTTAAATGGGGGGGTGGGGACAGGGACGGGGAAGGCTTCCCTGTCCCCGCCCCGCCCCGTGAACATCCTTAGTCGTCTAGCATATTCCACAACTTTAGAATCTATAAAGAAGACTATAAAGAATTTGGATGCGTTGGTAGTAGGAATAGTTGGATTCCCACATGCACTGTTGGTCTGGGCATATGAGTGCATCCCTCTCCTATCTGGACCCACGATGATTTGTGCCCAAAAGGTGTCAAGAGAGATGCCCAAAATGATCAACTGGGTTGCTGATTGCCATCTAGAGTGGAAGGACTTGGCAATTAAGTTTGAGTTCTATGAGATGATGGATGAAAGAGAAGAAGCTTTGTTCCATGGTGGGAACAACTGA GTTGGAACTTTCCAAGTGGCTTAACTCTGATATTGAGGAGATAAAAGTGATGGCATCAAGAATGATTGCTAAGTTTGAAAAATATTGGAGTGTGATTCATGGTGTTTTGGCACGAGATGTGAGTAGTCATAGCTCTATCATTCAGAAGAAAGATCGGTTTCTCAAGTTTGATGAGTTTGTTAATAATACTGCAAATGCTGATAATGTCAAATCAGAGCTGGATCTTTATTTAGAGGAAAATCTTTTACCACGATCAGATGATTTTGAAATTTTGAGTTGGTGGAAGTTAAATGGGGGGGTGGGGACAGGGACGGGGAAGGCTTCCCTGTCCCCGCCCCGCCCCGTGAACATCCTTAGTCGTCTAGCATATTCCACAACTTTAGAATCTATAAAGAAGACTATAAAGAATTTGGATGCGTTGGTAGTAGGAATAGTTGGATTCCCACATGCACTGTTGGTCTGGGCATATGAGTGCATCCCTCTCCTATCTGGACCCACGATGATTTGTGCCCAAAAGGTGTCAAGAGAGATGCCCAAAATGATCAACTGGGTTGCTGATTGCCATCTAGAGTGGAAGGACTTGGCAATTAAGTTTGAGTTCTATGAGATGATGGATGAAAGAGAAGAAGCTTTGTTCCATGGTGGGAACAACTGA MELSKWLNSDIEEIKVMASRMIAKFEKYWSVIHGVLARDVSSHSSIIQKKDRFLKFDEFVNNTANADNVKSELDLYLEENLLPRSDDFEILSWWKLNGGVGTGTGKASLSPPRPVNILSRLAYSTTLESIKKTIKNLDALVVGIVGFPHALLVWAYECIPLLSGPTMICAQKVSREMPKMINWVADCHLEWKDLAIKFEFYEMMDEREEALFHGGNN Homology
BLAST of Lag0032295 vs. NCBI nr
Match: KAA0051301.1 (uncharacterized protein E6C27_scaffold55G00080 [Cucumis melo var. makuwa]) HSP 1 Score: 104.0 bits (258), Expect = 1.7e-18 Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 0
BLAST of Lag0032295 vs. NCBI nr
Match: XP_038902461.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Benincasa hispida]) HSP 1 Score: 95.9 bits (237), Expect = 4.6e-16 Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = 0
BLAST of Lag0032295 vs. NCBI nr
Match: XP_022132727.1 (uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132728.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132729.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132730.1 uncharacterized protein LOC111005524 [Momordica charantia]) HSP 1 Score: 92.0 bits (227), Expect = 6.6e-15 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Lag0032295 vs. NCBI nr
Match: KAA0060374.1 (uncharacterized protein E6C27_scaffold22G001730 [Cucumis melo var. makuwa] >TYK22114.1 uncharacterized protein E5676_scaffold318G001110 [Cucumis melo var. makuwa]) HSP 1 Score: 89.0 bits (219), Expect = 5.6e-14 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of Lag0032295 vs. NCBI nr
Match: XP_031743197.1 (uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus]) HSP 1 Score: 85.5 bits (210), Expect = 6.2e-13 Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of Lag0032295 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06 Identity = 24/61 (39.34%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Lag0032295 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06 Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of Lag0032295 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.4e-06 Identity = 22/47 (46.81%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of Lag0032295 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.4e-06 Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 0
BLAST of Lag0032295 vs. ExPASy TrEMBL
Match: A0A5A7UCM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00080 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.1e-19 Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 0
BLAST of Lag0032295 vs. ExPASy TrEMBL
Match: A0A6J1BX50 (uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005524 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.2e-15 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Lag0032295 vs. ExPASy TrEMBL
Match: A0A5A7UZA2 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001110 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.7e-14 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of Lag0032295 vs. ExPASy TrEMBL
Match: A0A0A0KI50 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 3.0e-13 Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of Lag0032295 vs. ExPASy TrEMBL
Match: A0A5D3CNI7 (TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005170 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 5.1e-13 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Lag0032295 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 53.1 bits (126), Expect = 3.2e-07 Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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