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Lag0032007 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCGGTTCGAGGAGGTATGAAAGATTTCTACAAGCAAAGGAAAAAGAGTGGAATCTCCAAAGCCAACAACAAGGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCAACTTTGGGCTCCGGTGGCGTCCAACCGGCGGCTCTTATTTCTCACGGCTCCCTGGATCTTCAAGGTCTCTCTCTCTTCTTTTCCGGTCTCTCCAATTCCTCACGTTCCTGGAAAATTATTTTCTTCATTATGTTTCTTGAAACTGCAGTTACTGTTGTGGAGTTTGTGCCTCGTGATTGTGATTTGTGAAGGATTAAGCATGTTGCATTCTACAAGTTTTTGGATATCAATTGCGATTAAGTTATTCAATAGTTGAATTAAATACTCTCAATGTTTGGATCACTTTTAATGTTTCGGATGAAGAATATTATCGAGTTAATATGTTTAGTCTTATGCCTCATGAAGGATTAAGCATGTTGAAGTAATTGGATATTTGAATTAAGACCATCCATTGTCTGGGTTTCTTTAACTTCTGCTTCGTGGTTATGAAGGATTAAGCATGGAGACAAGAGGTTGTGGGATACCAGTTTCTATTAAGTTCTATAATAGTTGAATTATAGACACCTAATGTTTGGATTTCTTTAAACCTTCGACTGCAATACTGTTATCTGACTTATGTGTTTGGACGTCTGATATGGCGCTATACTGCCGGGATATTTATGTATCTTTTGCTTTGTCCATTTTTATAGACTGCATTTTGTTTCATTTTGAGTTTTGAATTTTGTTTTAGATGATTATGGTGAGTCTGAGAATATGGTGAGGCAATTTGACATGAACATGGCCTATGGACCTTGCCTTGGAATGACCAGAATGGAACGGTGGGAGCGTGCTTGTAATCTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCCGGCAAAGTGCAGTTAGAGTGCTTGTGGGATTCCCGAGTTTAA ATGGCGTCGGTTCGAGGAGGTATGAAAGATTTCTACAAGCAAAGGAAAAAGAGTGGAATCTCCAAAGCCAACAACAAGGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCAACTTTGGGCTCCGGTGGCGTCCAACCGGCGGCTCTTATTTCTCACGGCTCCCTGGATCTTCAAGTTACTGTTGTGGAGTTTGTGCCTCGTGATTATGATTATGGTGAGTCTGAGAATATGGTGAGGCAATTTGACATGAACATGGCCTATGGACCTTGCCTTGGAATGACCAGAATGGAACGGTGGGAGCGTGCTTGTAATCTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCCGGCAAAGTGCAGTTAGAGTGCTTGTGGGATTCCCGAGTTTAA ATGGCGTCGGTTCGAGGAGGTATGAAAGATTTCTACAAGCAAAGGAAAAAGAGTGGAATCTCCAAAGCCAACAACAAGGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCAACTTTGGGCTCCGGTGGCGTCCAACCGGCGGCTCTTATTTCTCACGGCTCCCTGGATCTTCAAGTTACTGTTGTGGAGTTTGTGCCTCGTGATTATGATTATGGTGAGTCTGAGAATATGGTGAGGCAATTTGACATGAACATGGCCTATGGACCTTGCCTTGGAATGACCAGAATGGAACGGTGGGAGCGTGCTTGTAATCTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCCGGCAAAGTGCAGTTAGAGTGCTTGTGGGATTCCCGAGTTTAA MASVRGGMKDFYKQRKKSGISKANNKASKPSSRKTKSPANSATLGSGGVQPAALISHGSLDLQVTVVEFVPRDYDYGESENMVRQFDMNMAYGPCLGMTRMERWERACNLGLNPPKDIETLLKAGKVQLECLWDSRV Homology
BLAST of Lag0032007 vs. NCBI nr
Match: XP_038875328.1 (DNA polymerase delta subunit 4 [Benincasa hispida]) HSP 1 Score: 218.0 bits (554), Expect = 5.0e-53 Identity = 113/137 (82.48%), Postives = 117/137 (85.40%), Query Frame = 0
BLAST of Lag0032007 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa] >TYK00302.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa]) HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52 Identity = 113/137 (82.48%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of Lag0032007 vs. NCBI nr
Match: XP_004143634.1 (uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_000175 [Cucumis sativus]) HSP 1 Score: 208.4 bits (529), Expect = 4.0e-50 Identity = 110/137 (80.29%), Postives = 115/137 (83.94%), Query Frame = 0
BLAST of Lag0032007 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata]) HSP 1 Score: 198.0 bits (502), Expect = 5.4e-47 Identity = 107/137 (78.10%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of Lag0032007 vs. NCBI nr
Match: XP_023532644.1 (uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46 Identity = 106/137 (77.37%), Postives = 111/137 (81.02%), Query Frame = 0
BLAST of Lag0032007 vs. ExPASy Swiss-Prot
Match: Q9HCU8 (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.6e-09 Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of Lag0032007 vs. ExPASy Swiss-Prot
Match: Q3T0X9 (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08 Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 0
BLAST of Lag0032007 vs. ExPASy Swiss-Prot
Match: Q9CWP8 (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07 Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of Lag0032007 vs. ExPASy Swiss-Prot
Match: O59835 (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.8e-06 Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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