Lag0031608 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031608
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein SINE3
Location	chr11: 10679639 .. 10680656 (+)
RNA-Seq Expression	Lag0031608
Synteny	Lag0031608

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAAGGATGAAAGATTACCAAACTCCGCAGAGAGATCCAGCGGCAAATCGTAGATTAAGGAAGCCTCAGAAGGTACGATTTGTTTTATCGGCTATTCTCATCTCCGTCATTCTCCACTTTGATTTCTTGTTCGTTCTGCTTCTGTTAAGATCGCCAAGAGTTTGACTGCCACATTCTCTTCACTTTCCGACGATAAAATCCAGCTAATTCCGAAGGAAGACTTCTCTCCGACTTCTGTTGTCTCAGATATCGACAGAGTAAGTTCTGATTCGTCTTTAATTTTTCGGACGATCGGTTCGATTTAACCGCTCATTTCGTTCTTCTGTTTTTGCTTTGTGTCTTCCTGCTTTTTCCGTTTTTTTTTCCTGATCAGTATATTAGGTGATCTAGGAGTATTCCTAATGTGAAGTGGATTTGTAATCTATTCTTTGCTCAAGTCATATTCGTTTTTTGTTCGTAATAATCTACTCCGACGAAACGTCGTATATGAGACATTTGTGATACTGGAATTTGATAGATTTAAAAAATTGCTGGTGTTCTAAGTTAGTTTTCTCTATTTCAGAGTTTCTTGCTAGGTGTTAATCCGGCTCTTTCTGCTTCCTGCGGGAGCTCGCTTTTCCCCGATCTTTCTCCATCTTCAGTCGTCACTTTTGACAATGAACAACTAGAGAAGGTTTCTGTTGATTTTCCTGGATCTAATGATTTAGATGAAGCAAGCGGTGGTTCAGTAGAGGCAGAGATTGCCGTGAATTCTTTAAGGCAGGCTTTAACTCGAGTCCTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCATGAGGATCATTGTGGAGGACTTCCTTGCTATACCTCAAGAGCGAGACCAGATTGCTCAACTTATTTCTGCCAAAAGTCAGGTTCTGTCTCTAGGTTTATTCATGTGGATCGTCTTCTTGGCTTTAGCTTTCTTTTTTAGTTCGGGAGTCAAGAGCTCTTTCATGGGGCCACTGCCGACTTAA

mRNA sequence

ATGGAGAAAAGGATGAAAGATTACCAAACTCCGCAGAGAGATCCAGCGGCAAATCGTAGATTAAGGAAGCCTCAGAAGATCGCCAAGAGTTTGACTGCCACATTCTCTTCACTTTCCGACGATAAAATCCAGCTAATTCCGAAGGAAGACTTCTCTCCGACTTCTGTTGTCTCAGATATCGACAGAAGTTTCTTGCTAGGTGTTAATCCGGCTCTTTCTGCTTCCTGCGGGAGCTCGCTTTTCCCCGATCTTTCTCCATCTTCAGTCGTCACTTTTGACAATGAACAACTAGAGAAGGTTTCTGTTGATTTTCCTGGATCTAATGATTTAGATGAAGCAAGCGGTGGTTCAGTAGAGGCAGAGATTGCCGTGAATTCTTTAAGGCAGGCTTTAACTCGAGTCCTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCATGAGGATCATTGTGGAGGACTTCCTTGCTATACCTCAAGAGCGAGACCAGATTGCTCAACTTATTTCTGCCAAAAGTCAGGTTCTGTCTCTAGGTTTATTCATGTGGATCGTCTTCTTGGCTTTAGCTTTCTTTTTTAGTTCGGGAGTCAAGAGCTCTTTCATGGGGCCACTGCCGACTTAA

Coding sequence (CDS)

ATGGAGAAAAGGATGAAAGATTACCAAACTCCGCAGAGAGATCCAGCGGCAAATCGTAGATTAAGGAAGCCTCAGAAGATCGCCAAGAGTTTGACTGCCACATTCTCTTCACTTTCCGACGATAAAATCCAGCTAATTCCGAAGGAAGACTTCTCTCCGACTTCTGTTGTCTCAGATATCGACAGAAGTTTCTTGCTAGGTGTTAATCCGGCTCTTTCTGCTTCCTGCGGGAGCTCGCTTTTCCCCGATCTTTCTCCATCTTCAGTCGTCACTTTTGACAATGAACAACTAGAGAAGGTTTCTGTTGATTTTCCTGGATCTAATGATTTAGATGAAGCAAGCGGTGGTTCAGTAGAGGCAGAGATTGCCGTGAATTCTTTAAGGCAGGCTTTAACTCGAGTCCTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCATGAGGATCATTGTGGAGGACTTCCTTGCTATACCTCAAGAGCGAGACCAGATTGCTCAACTTATTTCTGCCAAAAGTCAGGTTCTGTCTCTAGGTTTATTCATGTGGATCGTCTTCTTGGCTTTAGCTTTCTTTTTTAGTTCGGGAGTCAAGAGCTCTTTCATGGGGCCACTGCCGACTTAA

Protein sequence

MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISAKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT

Homology

[Close]

BLAST of Lag0031608 vs. NCBI nr
Match: XP_038876305.1 (uncharacterized protein LOC120068561 [Benincasa hispida])

HSP 1 Score: 311.6 bits (797), Expect = 5.1e-81
Identity = 170/217 (78.34%), Postives = 188/217 (86.64%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVS-- 60
           MEK+MKDYQTPQRD  ANRR RKPQKIAK LTATFSSLSDDKIQ I KEDFSP SVV+  
Sbjct: 1   MEKKMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLSDDKIQPISKEDFSPISVVTDI 60

Query: 61  ----DIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEAS 120
               DID +FL GVNPA SASC +SLF DLSPSSVV+FDNEQL+KV V+F GSND+DEAS
Sbjct: 61  NQIPDIDSNFLQGVNPAFSASCETSLFADLSPSSVVSFDNEQLDKVPVNFSGSNDMDEAS 120

Query: 121 GGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLIS 180
            GSVE +IAVNSLR+ALT+VLQSTDVDHQSKKLIDASM IIV+DFLAIPQERDQIAQLIS
Sbjct: 121 AGSVEVQIAVNSLRRALTQVLQSTDVDHQSKKLIDASMSIIVDDFLAIPQERDQIAQLIS 180

Query: 181 AKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
            K+ VLSL +F+WI+ LA+AFF  SGVKSSF+GPLPT
Sbjct: 181 VKNHVLSLCVFLWIIVLAIAFFLGSGVKSSFIGPLPT 217

[Close]

BLAST of Lag0031608 vs. NCBI nr
Match: XP_022959315.1 (uncharacterized protein LOC111460327 isoform X1 [Cucurbita moschata])

HSP 1 Score: 298.1 bits (762), Expect = 5.9e-77
Identity = 166/217 (76.50%), Postives = 184/217 (84.79%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVS-- 60
           ME+RMKD QTPQRD AANRR RKP KIAK LTATFSSLSDDKIQ   K+DFS  SVVS  
Sbjct: 1   MERRMKDSQTPQRDQAANRRSRKPLKIAKCLTATFSSLSDDKIQRSSKQDFSSISVVSDV 60

Query: 61  ----DIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEAS 120
               DIDRSFL  VNPALSA CGSSL PDLSPSSVVTFDN QL+KV V+F GSNDLDE  
Sbjct: 61  NQIPDIDRSFLHDVNPALSACCGSSLIPDLSPSSVVTFDNGQLDKVPVNFSGSNDLDETG 120

Query: 121 GGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLIS 180
            GSV AEIAV+SL +ALT+VLQSTDVDHQ+KKLIDAS+RIIV+DFLAIPQ+RD I Q+IS
Sbjct: 121 AGSVGAEIAVSSLSRALTQVLQSTDVDHQAKKLIDASIRIIVDDFLAIPQDRDHIFQIIS 180

Query: 181 AKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
           AK+QVLS+ LF+WI+ LALAFFF+S VKSSF+GPLPT
Sbjct: 181 AKNQVLSISLFLWIIVLALAFFFNSEVKSSFIGPLPT 217

[Close]

BLAST of Lag0031608 vs. NCBI nr
Match: KAG6575120.1 (hypothetical protein SDJN03_25759, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.1 bits (762), Expect = 5.9e-77
Identity = 166/222 (74.77%), Postives = 185/222 (83.33%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDI 60
           MEKRMKD QTPQRD AANRR RKP KIAK LTATFSSLSDDKIQ   K+DFSP SVVSD+
Sbjct: 1   MEKRMKDSQTPQRDQAANRRSRKPLKIAKCLTATFSSLSDDKIQQSSKQDFSPISVVSDV 60

Query: 61  D-----------RSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSND 120
           +           +S+L  VNPALSA CGSSL PDLSPSSVVTFDN QL+KV V+F GSND
Sbjct: 61  NQIPDIDRFPQFQSYLHDVNPALSACCGSSLIPDLSPSSVVTFDNGQLDKVPVNFSGSND 120

Query: 121 LDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQI 180
           LDE   GSV AEIAVNSL +ALT+VLQSTDVDHQ+KKLIDAS+RIIV+DFLAIPQ+RD I
Sbjct: 121 LDETGAGSVGAEIAVNSLSRALTQVLQSTDVDHQAKKLIDASIRIIVDDFLAIPQDRDHI 180

Query: 181 AQLISAKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
            QLISAK+QVLS+ LF+WI+ LALAFFF+S VKSSF+GPLPT
Sbjct: 181 FQLISAKNQVLSISLFLWIIVLALAFFFNSEVKSSFIGPLPT 222

[Close]

BLAST of Lag0031608 vs. NCBI nr
Match: XP_008458341.1 (PREDICTED: uncharacterized protein LOC103497781 [Cucumis melo] >XP_016902243.1 PREDICTED: uncharacterized protein LOC103497781 [Cucumis melo] >XP_016902244.1 PREDICTED: uncharacterized protein LOC103497781 [Cucumis melo] >TYK02961.1 uncharacterized protein E5676_scaffold46G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 297.0 bits (759), Expect = 1.3e-76
Identity = 164/217 (75.58%), Postives = 184/217 (84.79%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVV--- 60
           MEKRMKD+QTPQR+   NRR RKPQKIAK LTA+FSSLS+DKI  I KE+ SP SVV   
Sbjct: 1   MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDV 60

Query: 61  ---SDIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEAS 120
              SDID SFL GVNP  SA C +SLFPDLSPSSVV+FDNE L+KVSVDF GSND++EAS
Sbjct: 61  NQISDIDSSFLQGVNPEFSACCDTSLFPDLSPSSVVSFDNELLDKVSVDFSGSNDMNEAS 120

Query: 121 GGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLIS 180
            GS+EAEIAVNSLR+ALT+VL STDVDHQSKKLIDASMRIIV+DFLAIPQERD+IAQLIS
Sbjct: 121 AGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLIS 180

Query: 181 AKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
            K+ VLS+ +F+WIV LA+AFF  SGVKSSF GPLPT
Sbjct: 181 VKNYVLSMCVFLWIVVLAIAFFVGSGVKSSFTGPLPT 217

[Close]

BLAST of Lag0031608 vs. NCBI nr
Match: XP_022930352.1 (uncharacterized protein LOC111436822 [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-75
Identity = 163/217 (75.12%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVS-- 60
           MEKR K+YQTP RD AANRR +KP KI KSLTATFSS  DDKIQ I KEDFSP SVVS  
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNI 60

Query: 61  ----DIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEAS 120
               DID SFL  VNPALS SC SSLFP+LSPSSVVTFDN+QL+KV V+F GSN+LDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120

Query: 121 GGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLIS 180
            GSVEAEIAVN LR+AL++VLQSTDVDHQSKKLIDAS+RIIV++FLAIPQERD I +LIS
Sbjct: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180

Query: 181 AKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
           +KS VLSLGLF+WI+ L LAFF  SGV++ F+GPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGSGVENCFIGPLPT 217

[Close]

BLAST of Lag0031608 vs. ExPASy TrEMBL
Match: A0A6J1H5Y6 (uncharacterized protein LOC111460327 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460327 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.8e-77
Identity = 166/217 (76.50%), Postives = 184/217 (84.79%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVS-- 60
           ME+RMKD QTPQRD AANRR RKP KIAK LTATFSSLSDDKIQ   K+DFS  SVVS  
Sbjct: 1   MERRMKDSQTPQRDQAANRRSRKPLKIAKCLTATFSSLSDDKIQRSSKQDFSSISVVSDV 60

Query: 61  ----DIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEAS 120
               DIDRSFL  VNPALSA CGSSL PDLSPSSVVTFDN QL+KV V+F GSNDLDE  
Sbjct: 61  NQIPDIDRSFLHDVNPALSACCGSSLIPDLSPSSVVTFDNGQLDKVPVNFSGSNDLDETG 120

Query: 121 GGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLIS 180
            GSV AEIAV+SL +ALT+VLQSTDVDHQ+KKLIDAS+RIIV+DFLAIPQ+RD I Q+IS
Sbjct: 121 AGSVGAEIAVSSLSRALTQVLQSTDVDHQAKKLIDASIRIIVDDFLAIPQDRDHIFQIIS 180

Query: 181 AKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
           AK+QVLS+ LF+WI+ LALAFFF+S VKSSF+GPLPT
Sbjct: 181 AKNQVLSISLFLWIIVLALAFFFNSEVKSSFIGPLPT 217

[Close]

BLAST of Lag0031608 vs. ExPASy TrEMBL
Match: A0A1S4E1Y8 (uncharacterized protein LOC103497781 OS=Cucumis melo OX=3656 GN=LOC103497781 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.3e-77
Identity = 164/217 (75.58%), Postives = 184/217 (84.79%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVV--- 60
           MEKRMKD+QTPQR+   NRR RKPQKIAK LTA+FSSLS+DKI  I KE+ SP SVV   
Sbjct: 1   MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDV 60

Query: 61  ---SDIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEAS 120
              SDID SFL GVNP  SA C +SLFPDLSPSSVV+FDNE L+KVSVDF GSND++EAS
Sbjct: 61  NQISDIDSSFLQGVNPEFSACCDTSLFPDLSPSSVVSFDNELLDKVSVDFSGSNDMNEAS 120

Query: 121 GGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLIS 180
            GS+EAEIAVNSLR+ALT+VL STDVDHQSKKLIDASMRIIV+DFLAIPQERD+IAQLIS
Sbjct: 121 AGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLIS 180

Query: 181 AKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
            K+ VLS+ +F+WIV LA+AFF  SGVKSSF GPLPT
Sbjct: 181 VKNYVLSMCVFLWIVVLAIAFFVGSGVKSSFTGPLPT 217

[Close]

BLAST of Lag0031608 vs. ExPASy TrEMBL
Match: A0A5D3BTA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00440 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.3e-77
Identity = 164/217 (75.58%), Postives = 184/217 (84.79%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVV--- 60
           MEKRMKD+QTPQR+   NRR RKPQKIAK LTA+FSSLS+DKI  I KE+ SP SVV   
Sbjct: 1   MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDV 60

Query: 61  ---SDIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEAS 120
              SDID SFL GVNP  SA C +SLFPDLSPSSVV+FDNE L+KVSVDF GSND++EAS
Sbjct: 61  NQISDIDSSFLQGVNPEFSACCDTSLFPDLSPSSVVSFDNELLDKVSVDFSGSNDMNEAS 120

Query: 121 GGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLIS 180
            GS+EAEIAVNSLR+ALT+VL STDVDHQSKKLIDASMRIIV+DFLAIPQERD+IAQLIS
Sbjct: 121 AGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLIS 180

Query: 181 AKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
            K+ VLS+ +F+WIV LA+AFF  SGVKSSF GPLPT
Sbjct: 181 VKNYVLSMCVFLWIVVLAIAFFVGSGVKSSFTGPLPT 217

[Close]

BLAST of Lag0031608 vs. ExPASy TrEMBL
Match: A0A6J1EQ83 (uncharacterized protein LOC111436822 OS=Cucurbita moschata OX=3662 GN=LOC111436822 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.2e-76
Identity = 163/217 (75.12%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVS-- 60
           MEKR K+YQTP RD AANRR +KP KI KSLTATFSS  DDKIQ I KEDFSP SVVS  
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNI 60

Query: 61  ----DIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEAS 120
               DID SFL  VNPALS SC SSLFP+LSPSSVVTFDN+QL+KV V+F GSN+LDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGGSNNLDEAS 120

Query: 121 GGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLIS 180
            GSVEAEIAVN LR+AL++VLQSTDVDHQSKKLIDAS+RIIV++FLAIPQERD I +LIS
Sbjct: 121 AGSVEAEIAVNYLRRALSQVLQSTDVDHQSKKLIDASVRIIVDEFLAIPQERDLITRLIS 180

Query: 181 AKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
           +KS VLSLGLF+WI+ L LAFF  SGV++ F+GPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGSGVENCFIGPLPT 217

[Close]

BLAST of Lag0031608 vs. ExPASy TrEMBL
Match: A0A6J1KL67 (uncharacterized protein LOC111494286 OS=Cucurbita maxima OX=3661 GN=LOC111494286 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.5e-75
Identity = 163/217 (75.12%), Postives = 181/217 (83.41%), Query Frame = 0


Query: 1   MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVS-- 60
           MEKR K+YQTP RD AANRR +KP KI KSLTATFSS  DDKIQ I KEDFSP SVVS  
Sbjct: 1   MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNI 60

Query: 61  ----DIDRSFLLGVNPALSASCGSSLFPDLSPSSVVTFDNEQLEKVSVDFPGSNDLDEAS 120
               DID SFL  VNPALS SC SSLFP+LSPSSVVTFDN+QL+KV V+F  SN+LDEAS
Sbjct: 61  SQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDKVPVNFGESNNLDEAS 120

Query: 121 GGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLIS 180
            GSVEAEIAVN LR+AL +VLQSTDVDHQSKKLIDAS+RIIV+DFLAIPQERD I +LIS
Sbjct: 121 AGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLIS 180

Query: 181 AKSQVLSLGLFMWIVFLALAFFFSSGVKSSFMGPLPT 212
           +KS VLSLGLF+WI+ L LAFF  SGV++ F+GPLPT
Sbjct: 181 SKSHVLSLGLFLWIIVLVLAFFSGSGVENCFIGPLPT 217

The following BLAST results are available for this feature:

BLAST of Lag0031608 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876305.1	5.1e-81	78.34	uncharacterized protein LOC120068561 [Benincasa hispida]	[more]
XP_022959315.1	5.9e-77	76.50	uncharacterized protein LOC111460327 isoform X1 [Cucurbita moschata]	[more]
KAG6575120.1	5.9e-77	74.77	hypothetical protein SDJN03_25759, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008458341.1	1.3e-76	75.58	PREDICTED: uncharacterized protein LOC103497781 [Cucumis melo] >XP_016902243.1 P...	[more]
XP_022930352.1	1.9e-75	75.12	uncharacterized protein LOC111436822 [Cucurbita moschata]	[more]

BLAST of Lag0031608 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0031608 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5Y6	2.8e-77	76.50	uncharacterized protein LOC111460327 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S4E1Y8	6.3e-77	75.58	uncharacterized protein LOC103497781 OS=Cucumis melo OX=3656 GN=LOC103497781 PE=...	[more]
A0A5D3BTA3	6.3e-77	75.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1EQ83	9.2e-76	75.12	uncharacterized protein LOC111436822 OS=Cucurbita moschata OX=3662 GN=LOC1114368...	[more]
A0A6J1KL67	4.5e-75	75.12	uncharacterized protein LOC111494286 OS=Cucurbita maxima OX=3661 GN=LOC111494286...	[more]

BLAST of Lag0031608 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031608.1	Lag0031608.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane