Lag0031185 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031185
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	O-fucosyltransferase family protein
Location	chr11: 5615816 .. 5616214 (-)
RNA-Seq Expression	Lag0031185
Synteny	Lag0031185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCTCATGGAGGAAATATGGGCCATGCCATTCAGGTATATATATATTCTCATTCAGTTTGAGTCAATTCTTCTAGTTCACCGTCGTTGTTTAAAAACTTTTGCTTCTCGAGTCTGATCGTTAGAGTATAAGTAACGAGTCAATTGTTTGCTTTACTATAGGGACACAGGGCTTATGCTGGGCACAAGAAGTACATAACACCAAACAAAAGACACATGCTTCCCCTTTTCTTGGACTCCTCACTCCCTGAAGCAGAGTTTAACAGGATCATCAAGGAGCTGCATCAGGACTCCCTTGGACAGCCCGAGCTTCGAACCAGCAAAGTTGGGCGAGACGTCACCAAATACCCTATTCCCGAATGCATGTGCAACAGCTCTGATGCTCGTACCATATAA

mRNA sequence

ATGCCTTCTCATGGAGGAAATATGGGCCATGCCATTCAGGGACACAGGGCTTATGCTGGGCACAAGAAGTACATAACACCAAACAAAAGACACATGCTTCCCCTTTTCTTGGACTCCTCACTCCCTGAAGCAGAGTTTAACAGGATCATCAAGGAGCTGCATCAGGACTCCCTTGGACAGCCCGAGCTTCGAACCAGCAAAGTTGGGCGAGACGTCACCAAATACCCTATTCCCGAATGCATGTGCAACAGCTCTGATGCTCGTACCATATAA

Coding sequence (CDS)

ATGCCTTCTCATGGAGGAAATATGGGCCATGCCATTCAGGGACACAGGGCTTATGCTGGGCACAAGAAGTACATAACACCAAACAAAAGACACATGCTTCCCCTTTTCTTGGACTCCTCACTCCCTGAAGCAGAGTTTAACAGGATCATCAAGGAGCTGCATCAGGACTCCCTTGGACAGCCCGAGCTTCGAACCAGCAAAGTTGGGCGAGACGTCACCAAATACCCTATTCCCGAATGCATGTGCAACAGCTCTGATGCTCGTACCATATAA

Protein sequence

MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQPELRTSKVGRDVTKYPIPECMCNSSDARTI

Homology

[Close]

BLAST of Lag0031185 vs. NCBI nr
Match: XP_011651795.2 (O-fucosyltransferase 20 [Cucumis sativus] >KAE8650940.1 hypothetical protein Csa_002545 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 9.0e-43
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQ 60
           MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFN+II+ELHQDSLGQ
Sbjct: 482 MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNKIIRELHQDSLGQ 541

Query: 61  PELRTSKVGRDVTKYPIPECMC-NSSDARTI 91
           PELRTSKVGRDVTKYPIPECMC NSSDA TI
Sbjct: 542 PELRTSKVGRDVTKYPIPECMCNNSSDAHTI 572

[Close]

BLAST of Lag0031185 vs. NCBI nr
Match: XP_022152705.1 (uncharacterized protein At1g04910 [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 9.0e-43
Identity = 86/91 (94.51%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQ 60
           MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEA+FNR+I+ELHQDSLGQ
Sbjct: 484 MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEADFNRLIRELHQDSLGQ 543

Query: 61  PELRTSKVGRDVTKYPIPECMC-NSSDARTI 91
           PELRTSKVGRDVTKYPIPECMC N+SDARTI
Sbjct: 544 PELRTSKVGRDVTKYPIPECMCNNTSDARTI 574

[Close]

BLAST of Lag0031185 vs. NCBI nr
Match: KAG6606863.1 (O-fucosyltransferase 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQ 60
           MPSHGGNMGHAIQG RAYAGHKKYITPNKRHMLPLFLDSSLPE EFNRIIKELHQDSLGQ
Sbjct: 486 MPSHGGNMGHAIQGRRAYAGHKKYITPNKRHMLPLFLDSSLPEPEFNRIIKELHQDSLGQ 545

Query: 61  PELRTSKVGRDVTKYPIPECMC-NSSDARTI 91
           PELRTSKVGRDVTKYPIPECMC NSSDARTI
Sbjct: 546 PELRTSKVGRDVTKYPIPECMCNNSSDARTI 576

[Close]

BLAST of Lag0031185 vs. NCBI nr
Match: KAG7036569.1 (hypothetical protein SDJN02_00188 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 88/91 (96.70%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQ 60
           MPSHGGNMGHAIQG RAYAGHKKYITPNKRHMLPLFLDSSLPE EFNRIIKELHQDSLGQ
Sbjct: 486 MPSHGGNMGHAIQGRRAYAGHKKYITPNKRHMLPLFLDSSLPEPEFNRIIKELHQDSLGQ 545

Query: 61  PELRTSKVGRDVTKYPIPECMC-NSSDARTI 91
           PELRTSKVGRDVTKYPIPECMC NSSDARTI
Sbjct: 546 PELRTSKVGRDVTKYPIPECMCNNSSDARTI 576

[Close]

BLAST of Lag0031185 vs. NCBI nr
Match: XP_008461772.1 (PREDICTED: uncharacterized protein At1g04910 [Cucumis melo] >KAA0048304.1 O-FucT domain-containing protein [Cucumis melo var. makuwa] >TYK10649.1 O-FucT domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 181.4 bits (459), Expect = 3.4e-42
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQ 60
           MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFN+II+ELHQDSLGQ
Sbjct: 482 MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNKIIRELHQDSLGQ 541

Query: 61  PELRTSKVGRDVTKYPIPECMC-NSSDARTI 91
           PELRTSKVGRDVTKYPIPECMC NSSDA  I
Sbjct: 542 PELRTSKVGRDVTKYPIPECMCNNSSDAHAI 572

[Close]

BLAST of Lag0031185 vs. ExPASy Swiss-Prot
Match: O64884 (O-fucosyltransferase 20 OS=Arabidopsis thaliana OX=3702 GN=OFUT20 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-35
Identity = 64/83 (77.11%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQ 60
           +PSHGGNMGHA+QG RAYAGHKKYITPNKR MLP F++SSLPE++FNRI+K+LH++SLGQ
Sbjct: 480 IPSHGGNMGHALQGQRAYAGHKKYITPNKRQMLPYFMNSSLPESDFNRIVKDLHRESLGQ 539

Query: 61  PELRTSKVGRDVTKYPIPECMCN 84
           PELR SK G+DVTK+P+PECMC+
Sbjct: 540 PELRMSKAGKDVTKHPVPECMCS 562

[Close]

BLAST of Lag0031185 vs. ExPASy Swiss-Prot
Match: Q9SFC4 (O-fucosyltransferase 24 OS=Arabidopsis thaliana OX=3702 GN=OFUT24 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.9e-35
Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQ 60
           M SHGGNMGHAIQGHRAY GHKK ITPNKRHMLP F++SSL E EF ++IK+LH+ SLGQ
Sbjct: 491 MASHGGNMGHAIQGHRAYEGHKKIITPNKRHMLPYFVNSSLTETEFEKMIKKLHRQSLGQ 550

Query: 61  PELRTSKVGRDVTKYPIPECMCNSSD 87
           PELR SK GRDVTKYP+PECMCN S+
Sbjct: 551 PELRISKAGRDVTKYPVPECMCNQSN 576

[Close]

BLAST of Lag0031185 vs. ExPASy Swiss-Prot
Match: A0A0B5GR44 (O-fucosyltransferase 20 OS=Brassica napus OX=3708 GN=OFUT20 PE=2 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 9.4e-35
Identity = 62/83 (74.70%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQ 60
           +PSHGGNMGHA+QG RAYAGHKKYITPNKRHMLP F+++SLPE+EFNRI+K+ H++SLGQ
Sbjct: 466 IPSHGGNMGHALQGQRAYAGHKKYITPNKRHMLPYFMNASLPESEFNRIVKDFHRESLGQ 525

Query: 61  PELRTSKVGRDVTKYPIPECMCN 84
           PELRT + G+DVTK+P+ ECMC+
Sbjct: 526 PELRTGRGGKDVTKHPVSECMCS 548

[Close]

BLAST of Lag0031185 vs. ExPASy Swiss-Prot
Match: Q9FMW3 (O-fucosyltransferase 37 OS=Arabidopsis thaliana OX=3702 GN=OFUT37 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.4e-22
Identity = 47/90 (52.22%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLDSSLPEAEFNRIIKELHQDSLGQ 60
           +PSHGGNM  A+QG+RAY GH+K+I PNKR MLPL  +SS+ +AE + + ++LH+ S G 
Sbjct: 467 IPSHGGNMAKAMQGNRAYVGHRKFIMPNKRAMLPLMENSSVSDAELSFLTRKLHRKSQGY 526

Query: 61  PELRTSKVGRDVTKYPIPECMCNSSDARTI 91
           PE R  +  RDV  YP+PECMC     R++
Sbjct: 527 PESRRGRRDRDVIAYPVPECMCRHRKHRSV 556

[Close]

BLAST of Lag0031185 vs. ExPASy Swiss-Prot
Match: F4KF16 (O-fucosyltransferase 38 OS=Arabidopsis thaliana OX=3702 GN=OFUT38 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.8e-09
Identity = 30/101 (29.70%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 1   MPSHGGNMGHAIQGHRAYAGHKKYITPNKRHMLPLFLD---SSLPEA-EFNRIIKELHQD 60
           +PSH GNM  A++GHR + GH++ ITP+++ ++ LF+      L E  + +  + ++H+D
Sbjct: 418 VPSHSGNMARAVEGHRRFLGHRRTITPDRKGLVKLFVKMERGQLKEGPKLSNFVNQMHKD 477

Query: 61  SLGQPELRTS-----------KVGRDVTKYPIPECMCNSSD 87
             G P  R             +      + P PEC+C+S +
Sbjct: 478 RQGAPRRRKGPTQGIKGRARFRTEEAFYENPYPECICSSKE 518

The following BLAST results are available for this feature:

BLAST of Lag0031185 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651795.2	9.0e-43	95.60	O-fucosyltransferase 20 [Cucumis sativus] >KAE8650940.1 hypothetical protein Csa...	[more]
XP_022152705.1	9.0e-43	94.51	uncharacterized protein At1g04910 [Momordica charantia]	[more]
KAG6606863.1	1.5e-42	96.70	O-fucosyltransferase 20, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7036569.1	1.5e-42	96.70	hypothetical protein SDJN02_00188 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008461772.1	3.4e-42	94.51	PREDICTED: uncharacterized protein At1g04910 [Cucumis melo] >KAA0048304.1 O-FucT...	[more]

BLAST of Lag0031185 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64884	1.1e-35	77.11	O-fucosyltransferase 20 OS=Arabidopsis thaliana OX=3702 GN=OFUT20 PE=1 SV=1	[more]
Q9SFC4	1.9e-35	77.91	O-fucosyltransferase 24 OS=Arabidopsis thaliana OX=3702 GN=OFUT24 PE=2 SV=1	[more]
A0A0B5GR44	9.4e-35	74.70	O-fucosyltransferase 20 OS=Brassica napus OX=3708 GN=OFUT20 PE=2 SV=2	[more]
Q9FMW3	2.4e-22	52.22	O-fucosyltransferase 37 OS=Arabidopsis thaliana OX=3702 GN=OFUT37 PE=2 SV=1	[more]
F4KF16	8.8e-09	29.70	O-fucosyltransferase 38 OS=Arabidopsis thaliana OX=3702 GN=OFUT38 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31741	OS02G0726500 PROTEIN-RELATED	coord: 1..85
None	No IPR available	PANTHER	PTHR31741:SF60	O-FUCOSYLTRANSFERASE FAMILY PROTEIN	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031185.1	Lag0031185.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006004	fucose metabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016757	glycosyltransferase activity