Lag0031046 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031046
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Small COPII coat GTPase SAR1
Location	chr11: 4162781 .. 4164808 (-)
RNA-Seq Expression	Lag0031046
Synteny	Lag0031046

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCTCATTGACTGGTTCTATGGCGTCTTGGCCTCCCTCGGTCTCTGGCAGAAGGAGGCCAAGATCCTCTTTCTCGGCCTCGATAATGCCGGCAAAACCACCCTCCTCCACATGTTGAAGGACGAGGTTTGATTTCTTCTTCCCTTTCTGTTGTTCGATTTCGGTTTTTGCAATTTCGGGGAAACCGATATGTTTTGTTTTCTTAATCGATTTGACTGGATGGCTGTAGATTTTTATTTGTTTCTCATCGTGTGGCTTGGCTATTGTTCTTTGTTTGTTTGGTTGCTCTTTTGGTTTGTTTTTGTTCTACTAGAGGCTTGTTCAGCACCAGCCTACCCAGTACCCGACGTCTGAGGAGTTGAGTATTGGGAAAATCAAATTCAAGGCCTTTGATTTGGGTGGGCATCAAATTGCTCGCAGAGTCTGGAAGGATTACTATGCTAAGGTAATAAAACGCAGTTATTATGAAGTCAAGCTTATTGTATTCCATTTTCGTTTGTTTTCTCTGCTTTCCCGTGAATTTCTTGGGCACTTGGCTCTGTTGAGGAGCACTTTACTAATTGTTATATGTTTTCACATTACTGTTGTGTGTGATTTCCCACTGATAACTGGAAATCTTCATGAGCTTAAGAATTGTTATATTTTTCATGATTAAGCGGCCGATGTTTCTCTATTTCTTGGCCAATTTTGCTAGCTGATATATGGTGGGAGATATTTTGTACTGTATCCTGAACTTGTTGGGTTTCCATCTATTGTGTTTGCAATTATGTCCCTACACCCTTCCATTGATGCGACCTGGGTCTCGGGTCCTTTTAAGTTTTAGTCTTCCATGTGTTTAGGTATTTGTCAGGTCCAAGTTGAAAGAACAATGACATTAGTTACTTTTGTTATTTTCTTTTTCTTGTAAGAGATCGGATTTCTTCTTGAGCTGCGTATTAACTCGCTCAGTTTTGGTGATTTTCCATCTTTTGTTTATCCTACTTCTTGTGGTGTGATAGCTTTAACAGAAACTTTGTAATGGTCTCTTGTTGTTGAAAATTTGCTTATCTGAACTATTAAGGAAAAAATAAAGGGCTTAGGAATGGGTTCAATCCATGATGACCACCTATCTAGGATTTAATATCCTACATGTTTTTCTGACAACCAAATGTAGTAGGGTCAAGTGGTTGTCCCGCTAGATTAGTCGAATTGCGTGCAAGTTGGCCCGAACACTATCAGATATCAAAAAAAAAAAAAAAAATGCTTATTTTCCATTGGCCCATAAAAGAATACACATGTTGTAGTAACTACAATGAAGTAACTCAAGTAACAATTGTCATAGTTTAGTGTAAGCATTCTAAAGAATTTATACATAATATTCTGAACTCTTCTGCTGAATGGATTATAACAATGTATCCTTAGTACAGCACCTTTGGAAGAAATTTTGCTAAGTTCTTCAATTAGTACAACACCTTTGGAAGAAAGTGTGCTAAGTTCTTCAAGCTGTCAGTCTGGTTGATTTTCTGTTCTTCTGAAGCAAGAGAGCATTTTGCACTGTCGGTTTTGTTGCCTGTGTAGTGTTTGATTTTCCGCAGTCTGTGTTCTGAAATGTAGTTCTGCCGTACATGGATTATGCTGGATGGTTTTTGCATATATTTCCAACTTTCTGCAATAGTGTGGTGCTTAGACATAGCTTCTAATTTTAAATGAAAATTGATATCACAGGTAGATGCTGTCGTGTACCTGGTCGATGCCTTTGACAAAGAGAGGTTTGCAGAATCAAAAAAGGAACTCGATGCTCTTCTCTCTGATGAGGCTCTTGCTAACGTGCCATTCCTTATATTGGGCAACAAGATTGACATTCCATATGCTGCCTCAGAGGACGAATTGCGCTATCACCTCGGCTTGACCAACTTCACCACAGGCAAGGGAAAAGTAAGTATGGCTGATTCGAATGTACGTCCATTAGAGGTATTCATGTGCAGTATCGTTCGCAAAATGGGTTACGGTGACGGTTTCAAGTGGATGTCTCAATATATCAAGTAG

mRNA sequence

ATGTTCCTCATTGACTGGTTCTATGGCGTCTTGGCCTCCCTCGGTCTCTGGCAGAAGGAGGCCAAGATCCTCTTTCTCGGCCTCGATAATGCCGGCAAAACCACCCTCCTCCACATGTTGAAGGACGAGAGGCTTGTTCAGCACCAGCCTACCCAGTACCCGACGTCTGAGGAGTTGAGTATTGGGAAAATCAAATTCAAGGCCTTTGATTTGGGTGGGCATCAAATTGCTCGCAGAGTCTGGAAGGATTACTATGCTAAGGTAGATGCTGTCGTGTACCTGGTCGATGCCTTTGACAAAGAGAGGTTTGCAGAATCAAAAAAGGAACTCGATGCTCTTCTCTCTGATGAGGCTCTTGCTAACGTGCCATTCCTTATATTGGGCAACAAGATTGACATTCCATATGCTGCCTCAGAGGACGAATTGCGCTATCACCTCGGCTTGACCAACTTCACCACAGGCAAGGGAAAAGTAAGTATGGCTGATTCGAATGTACGTCCATTAGAGGTATTCATGTGCAGTATCGTTCGCAAAATGGGTTACGGTGACGGTTTCAAGTGGATGTCTCAATATATCAAGTAG

Coding sequence (CDS)

ATGTTCCTCATTGACTGGTTCTATGGCGTCTTGGCCTCCCTCGGTCTCTGGCAGAAGGAGGCCAAGATCCTCTTTCTCGGCCTCGATAATGCCGGCAAAACCACCCTCCTCCACATGTTGAAGGACGAGAGGCTTGTTCAGCACCAGCCTACCCAGTACCCGACGTCTGAGGAGTTGAGTATTGGGAAAATCAAATTCAAGGCCTTTGATTTGGGTGGGCATCAAATTGCTCGCAGAGTCTGGAAGGATTACTATGCTAAGGTAGATGCTGTCGTGTACCTGGTCGATGCCTTTGACAAAGAGAGGTTTGCAGAATCAAAAAAGGAACTCGATGCTCTTCTCTCTGATGAGGCTCTTGCTAACGTGCCATTCCTTATATTGGGCAACAAGATTGACATTCCATATGCTGCCTCAGAGGACGAATTGCGCTATCACCTCGGCTTGACCAACTTCACCACAGGCAAGGGAAAAGTAAGTATGGCTGATTCGAATGTACGTCCATTAGAGGTATTCATGTGCAGTATCGTTCGCAAAATGGGTTACGGTGACGGTTTCAAGTGGATGTCTCAATATATCAAGTAG

Protein sequence

MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMGYGDGFKWMSQYIK

Homology

[Close]

BLAST of Lag0031046 vs. NCBI nr
Match: XP_022728059.1 (GTP-binding protein SAR1A [Durio zibethinus])

HSP 1 Score: 392.5 bits (1007), Expect = 2.1e-105
Identity = 190/193 (98.45%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV++ADSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Lag0031046 vs. NCBI nr
Match: XP_012474982.1 (PREDICTED: GTP-binding protein SAR1A-like [Gossypium raimondii] >XP_016694324.1 GTP-binding protein SAR1A [Gossypium hirsutum] >KAB2017258.1 hypothetical protein ES319_D08G150000v1 [Gossypium barbadense] >MBA0611034.1 hypothetical protein [Gossypium davidsonii] >MBA0646127.1 hypothetical protein [Gossypium klotzschianum] >MBA0736880.1 hypothetical protein [Gossypium gossypioides] >MBA0763414.1 hypothetical protein [Gossypium trilobum] >MBA0796249.1 hypothetical protein [Gossypium harknessii] >MBA0826510.1 hypothetical protein [Gossypium armourianum] >TYG57651.1 hypothetical protein ES288_D08G159800v1 [Gossypium darwinii] >TYH58467.1 hypothetical protein ES332_D08G155600v1 [Gossypium tomentosum] >TYI69358.1 hypothetical protein E1A91_D08G149800v1 [Gossypium mustelinum])

HSP 1 Score: 392.1 bits (1006), Expect = 2.7e-105
Identity = 189/193 (97.93%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV++ADSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Lag0031046 vs. NCBI nr
Match: XP_015874891.1 (GTP-binding protein SAR1A [Ziziphus jujuba])

HSP 1 Score: 391.7 bits (1005), Expect = 3.6e-105
Identity = 189/193 (97.93%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV++ADSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YGDGFKW+SQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Lag0031046 vs. NCBI nr
Match: XP_007051084.1 (PREDICTED: GTP-binding protein SAR1A [Theobroma cacao] >XP_017612193.1 PREDICTED: GTP-binding protein SAR1A-like [Gossypium arboreum] >XP_021280642.1 GTP-binding protein SAR1A-like [Herrania umbratica] >XP_022770843.1 GTP-binding protein SAR1A-like [Durio zibethinus] >TYJ22581.1 hypothetical protein E1A91_A08G135100v1 [Gossypium mustelinum] >EOX95241.1 Secretion-associated RAS super family 2 isoform 2 [Theobroma cacao] >KHG16891.1 GTP-binding SAR1A -like protein [Gossypium arboreum] >TYJ22582.1 hypothetical protein E1A91_A08G135100v1 [Gossypium mustelinum])

HSP 1 Score: 391.7 bits (1005), Expect = 3.6e-105
Identity = 189/193 (97.93%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV++ADSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Lag0031046 vs. NCBI nr
Match: MBA0680095.1 (hypothetical protein [Gossypium aridum] >MBA0709356.1 hypothetical protein [Gossypium laxum] >MBA0853619.1 hypothetical protein [Gossypium schwendimanii])

HSP 1 Score: 391.7 bits (1005), Expect = 3.6e-105
Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV +ADSNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVDLADSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YGDGFKWMSQYIK
Sbjct: 181 YGDGFKWMSQYIK 193

[Close]

BLAST of Lag0031046 vs. ExPASy Swiss-Prot
Match: O04834 (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.1e-104
Identity = 182/193 (94.30%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MF+IDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMG 180
           +VPFLILGNKIDIPYAASEDELRYHLGL+NFTTGKGKV++ DSNVRPLEVFMCSIVRKMG
Sbjct: 121 SVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWVSQYIK 193

[Close]

BLAST of Lag0031046 vs. ExPASy Swiss-Prot
Match: O04266 (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-103
Identity = 181/193 (93.78%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MF+IDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFVIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMG 180
            VPFLILGNKIDIPYAASEDELRYHLGL+NFTTGKGKV +  SNVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWLSQYIK 193

[Close]

BLAST of Lag0031046 vs. ExPASy Swiss-Prot
Match: Q01474 (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-103
Identity = 180/192 (93.75%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERFAESK+ELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMG 180
            VPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV++ DS VRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYI 193
           YG+GFKW+SQYI
Sbjct: 181 YGEGFKWLSQYI 192

[Close]

BLAST of Lag0031046 vs. ExPASy Swiss-Prot
Match: O04267 (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 5.6e-101
Identity = 179/194 (92.27%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDA+DKERF+ESKKELDALLSD+ALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALA 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMA--DSNVRPLEVFMCSIVRK 180
            VPFLILGNKID PYAASEDELRYHLGLTNFTTGKGKV+ A  DS VRPLEVFMCSIVRK
Sbjct: 121 TVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRK 180

Query: 181 MGYGDGFKWMSQYI 193
           MGYG+GFKW+SQYI
Sbjct: 181 MGYGEGFKWLSQYI 194

[Close]

BLAST of Lag0031046 vs. ExPASy Swiss-Prot
Match: P52884 (GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.4e-99
Identity = 172/193 (89.12%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MFLIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60
           MFL+DWFYGVLASLGLWQK+AKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALLSDEALA 120
           IG IKFKAFDLGGHQIARRVW+DYYAKVDAVVYLVDA D+ERF E+KKELD LLSDE+L 
Sbjct: 61  IGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLT 120

Query: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSMADSNVRPLEVFMCSIVRKMG 180
           NVPFLILGNKIDIPYAASEDELRYHLGLT  TTGKG +++A +NVRP+EVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMG 180

Query: 181 YGDGFKWMSQYIK 194
           YG+GFKWMSQYIK
Sbjct: 181 YGEGFKWMSQYIK 193

The following BLAST results are available for this feature:

BLAST of Lag0031046 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022728059.1	2.1e-105	98.45	GTP-binding protein SAR1A [Durio zibethinus]	[more]
XP_012474982.1	2.7e-105	97.93	PREDICTED: GTP-binding protein SAR1A-like [Gossypium raimondii] >XP_016694324.1 ...	[more]
XP_015874891.1	3.6e-105	97.93	GTP-binding protein SAR1A [Ziziphus jujuba]	[more]
XP_007051084.1	3.6e-105	97.93	PREDICTED: GTP-binding protein SAR1A [Theobroma cacao] >XP_017612193.1 PREDICTED...	[more]
MBA0680095.1	3.6e-105	97.93	hypothetical protein [Gossypium aridum] >MBA0709356.1 hypothetical protein [Goss...	[more]

BLAST of Lag0031046 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04834	1.1e-104	94.30	GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1	[more]
O04266	1.2e-103	93.78	GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1	[more]
Q01474	1.6e-103	93.75	GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1	[more]
O04267	5.6e-101	92.27	GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1	[more]
P52884	1.4e-99	89.12	GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 77..102 score: 82.13 coord: 166..190 score: 79.53 coord: 22..45 score: 94.61 coord: 50..74 score: 86.12 coord: 122..143 score: 90.11
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 4..192 e-value: 9.2E-133 score: 457.0
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 8..192 e-value: 4.6E-65 score: 218.3
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 4..193 e-value: 1.0E-17 score: 74.9
None	No IPR available	PANTHER	PTHR45684:SF32	PROTEIN SAR1A, PUTATIVE, EXPRESSED-RELATED	coord: 1..193
None	No IPR available	PROSITE	PS51422	SAR1	coord: 14..192 score: 30.280468
None	No IPR available	PROSITE	PS51417	ARF	coord: 14..192 score: 15.663568
None	No IPR available	CDD	cd00879	Sar1	coord: 2..192 e-value: 3.61516E-132 score: 366.603
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..193 e-value: 1.5E-75 score: 254.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 17..192
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 19..135 e-value: 6.6E-16 score: 56.5
IPR006687	Small GTPase superfamily, SAR1-type	PANTHER	PTHR45684	RE74312P	coord: 1..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031046.1	Lag0031046.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070863	positive regulation of protein exit from endoplasmic reticulum
biological_process	GO:0003400	regulation of COPII vesicle coating
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0070971	endoplasmic reticulum exit site
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding