Lag0030244 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0030244
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	cell wall protein RBR3-like isoform X2
Location	chr8: 45723900 .. 45726329 (-)
RNA-Seq Expression	Lag0030244
Synteny	Lag0030244

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCCCTCTCTGACTGTACCAATACCATCCTCTCCTCTCAGTCGCCGGCGTCGAATTTCTCCGCTGCAATCAAACCTCGCAAACGTGTAATTAAACCTGCGGTTAAAGATGTTCTCAACAATGAGAAGAAAGGCGAATCAAGTGTTCCGTCTGAATCTACATCCGTTAATTTGCAAGCTCCAAACCCTAGTTCTGATTTTCTTCCCACGGAACCCAGCTCTAATTCTCCTCCTGCAGAACCAAACCCTAGTTCTGATTCTCTTTTTACAGAACCTAGTTCTAGTAGTCTTCCTACAGAAGCCTCCACTCCTTCGCGGCGTTCTGATTTGCCGTCTAGTTCAGGTAATCGTACTTTCTGGTATTCGTTTCCGTGTTATGATGTTGGTGTCTGGCCCTTGATTCTTTTAGCAGGATTACTGGTACTGTAAGTATTAGTACCTGTTACTCCCTTTTTGCTTAAAATAGGAATTCAGTTTACTTGAATACTACTTTGGAATTTAAGGAGTACAAGCTATTTTGGGGATTGTTAAGAATTTTAAGTAGGAGGGATTTGTTGTTTTACTGTTAAGTTCTTGTGCGGAGTTGAAATTTCTGCCTGCGGGAGAGTGTTCTTCTTGTAGGCATGGTTATATGAACTAGGAACCTCAATATTGGGATCAGTTCAATTTTTCCATGGCTTTGACTTTGGATAATATGTTACGTTTTGACTTCAGGAACAGATCGTGTTTCCGAGCCCCAGTCATTCTACAGTCGAAGGCACCCTGCGAATAAAAGGAAGAGCACAGAGGTAGCAGTTGCACCATTTATTTTTTCTACCGCATCGAAAATCCAAACTCGGTAAATCTCTCTGCACTTTTCCCCCCTATTTGAGACAAAATCTCTGATACGCTTAATGGATTGAATTTTTTAAACCAGAGGGATTTAATCATAGGTTCATAATGCCTAATGAGAGTGTTACGATGTTAGAACTCATGGACACAGTAGTACAACCTATAGAATAAGTCCTGTTCAAGTAAGGTCATCCATGTTATATATGTGACTTGTGGAATTCAATGGTTGTGAAGTTTCAAAGGAGCAATTTGTCTGCTCTTTGCAATAATTATCAGTCTGGCCTGCCCCTGCCCTGCTTTTTGGAAAATTTAAACAGTCATCTATCCCAGTTTATGTGTTGCTTTGCTTCATGAAGTAAATCTAACTATCTAAACAATTACTATTCTGGTTGGTCTGGTGTTACTCTGACTTTATCTACATCAAGGAAAAATTGTACCACCTAAATCAGGATTTTTCAACTCTTTTTCTTTTTTATTCTTGGTGATAGGTTTGTTGAGCCTCAATTGTTTGACTGCTTTAGGATGAAAAGCTTTCGTCTGTTGAGGCTTTTCATCTTTGTAATTGAATGCTTGGTTGGCTTCTTAATAGCGACCAGTTTTGTTATCATTTTATAATTAAATGGAAAGAGTAAATTTAAGATAGTGGGCACTAGTGATAGTAATACTAATACTACAATGTTTCTCTAAAGATATGCATTAATGGATATAAGAAATCTGTCTCCTAATCTCTCATTTACAGTTTATTAATCATTTGGTTGTAAATCATCCTCTTGCTTTTATTTTGTAGGGGTGAGAGTAGAGATGGATACAATAGCCCATCCAAAGCGAGGACAGTTCCTTATAGAAAGGTCTGTCTGAAAATTATAGCACTGGCAATTTTTTTTTTTTTTTCTGTCAATCTAAACTCAGGCATACCTGTATCCTTATCTTTGCTCCTTGTTTCTTTAGGATTTAAGTTGATGCTTATTCTTTATGTCAACAAAACCTGTGTTCTGACCTTTCTTTTAGAAAGGCGATGTTATCTTGTGCTTACCTACACCAAAATTAATGAGCTCTGTTCCTGATTAATTGGTACCATAGTATGGACGTTACTCATAGTCATGGTTTAGGCAATATTTTACCAACTTTTGTTTATATTGTCAATGGGATTATCAATTGATTATTGACTGACTTAAAGAATAGTAAATACTTGAAATGAAACGGCAAACAATACCCCCCCCCCCTCCCTCCGGTCTCCGCTGTCAAAATCACTGCATCTCAGTTTTGATGACCTAACGAATGGCCATGATAAAGATATGGTAGTTGACTAATCGTGCAGTTAAAAGTCACTTTTATTTCCCATTTACCATTTGTTAGCAGTCATCTACTAAAAACCTTATATCATGGTTCAACAAATTGTATTGATGAATAGCTTTTGTTTGGCAGAGGCAGCGTGCCATATATGGGGAAGATGAGTCCAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAGAAAGCATATTTTTCAGAAGTAGATGCATTTGAACTGCCAGTAGAGGAAGCTAAATCATCTGACTCCGAGTAG

mRNA sequence

ATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCCCTCTCTGACTGTACCAATACCATCCTCTCCTCTCAGTCGCCGGCGTCGAATTTCTCCGCTGCAATCAAACCTCGCAAACGTGTAATTAAACCTGCGGTTAAAGATGTTCTCAACAATGAGAAGAAAGGCGAATCAAGTGTTCCGTCTGAATCTACATCCGTTAATTTGCAAGCTCCAAACCCTAGTTCTGATTTTCTTCCCACGGAACCCAGCTCTAATTCTCCTCCTGCAGAACCAAACCCTAGTTCTGATTCTCTTTTTACAGAACCTAGTTCTAGTAGTCTTCCTACAGAAGCCTCCACTCCTTCGCGGCGTTCTGATTTGCCGTCTAGTTCAGGTAATCGTACTTTCTGGTATTCGTTTCCGTGTTATGATGTTGGTGTCTGGCCCTTGATTCTTTTAGCAGGATTACTGGAACAGATCGTGTTTCCGAGCCCCAGTCATTCTACAGTCGAAGGCACCCTGCGAATAAAAGGAAGAGCACAGAGGGGTGAGAGTAGAGATGGATACAATAGCCCATCCAAAGCGAGGACAGTTCCTTATAGAAAGAGGCAGCGTGCCATATATGGGGAAGATGAGTCCAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAGAAAGCATATTTTTCAGAAGTAGATGCATTTGAACTGCCAGTAGAGGAAGCTAAATCATCTGACTCCGAGTAG

Coding sequence (CDS)

ATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCCCTCTCTGACTGTACCAATACCATCCTCTCCTCTCAGTCGCCGGCGTCGAATTTCTCCGCTGCAATCAAACCTCGCAAACGTGTAATTAAACCTGCGGTTAAAGATGTTCTCAACAATGAGAAGAAAGGCGAATCAAGTGTTCCGTCTGAATCTACATCCGTTAATTTGCAAGCTCCAAACCCTAGTTCTGATTTTCTTCCCACGGAACCCAGCTCTAATTCTCCTCCTGCAGAACCAAACCCTAGTTCTGATTCTCTTTTTACAGAACCTAGTTCTAGTAGTCTTCCTACAGAAGCCTCCACTCCTTCGCGGCGTTCTGATTTGCCGTCTAGTTCAGGTAATCGTACTTTCTGGTATTCGTTTCCGTGTTATGATGTTGGTGTCTGGCCCTTGATTCTTTTAGCAGGATTACTGGAACAGATCGTGTTTCCGAGCCCCAGTCATTCTACAGTCGAAGGCACCCTGCGAATAAAAGGAAGAGCACAGAGGGGTGAGAGTAGAGATGGATACAATAGCCCATCCAAAGCGAGGACAGTTCCTTATAGAAAGAGGCAGCGTGCCATATATGGGGAAGATGAGTCCAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAGAAAGCATATTTTTCAGAAGTAGATGCATTTGAACTGCCAGTAGAGGAAGCTAAATCATCTGACTCCGAGTAG

Protein sequence

MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSDLPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESRDGYNSPSKARTVPYRKRQRAIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE

Homology

[Close]

BLAST of Lag0030244 vs. NCBI nr
Match: XP_023515045.1 (uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.9 bits (668), Expect = 5.4e-66
Identity = 166/258 (64.34%), Postives = 180/258 (69.77%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDVLNNEK+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVLNNEKEGVSSF 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL TEPSSSS+P E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRLVD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR------- 180
           LPSSSG                         +++  P   +S      R K         
Sbjct: 121 LPSSSGT------------------------DRVPEPQSFYSRRHPANRRKSTETAAAPF 180

Query: 181 --------AQRGESRDGYNSPSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFS 240
                     RGE R   +SPS+ARTVPYRKRQR AIYGEDESKIELPREFVE+QKAYFS
Sbjct: 181 IFSTASKILTRGEKRAADSSPSRARTVPYRKRQRGAIYGEDESKIELPREFVEKQKAYFS 234

Query: 241 EVDAFELPVEEAKSSDSE 243
           EVDAFEL VEEAKSSDSE
Sbjct: 241 EVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Lag0030244 vs. NCBI nr
Match: XP_023515126.1 (uncharacterized protein LOC111779162 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.5 bits (667), Expect = 7.0e-66
Identity = 165/243 (67.90%), Postives = 177/243 (72.84%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDVLNNEK+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVLNNEKEGVSSF 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL TEPSSSS+P E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRLVD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESR 180
           LPSSS       SF                    +F + S               RGE R
Sbjct: 121 LPSSSDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILT-----------RGEKR 180

Query: 181 DGYNSPSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSS 240
              +SPS+ARTVPYRKRQR AIYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSS
Sbjct: 181 AADSSPSRARTVPYRKRQRGAIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSS 232

Query: 241 DSE 243
           DSE
Sbjct: 241 DSE 232

[Close]

BLAST of Lag0030244 vs. NCBI nr
Match: XP_022991070.1 (uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima])

HSP 1 Score: 261.5 bits (667), Expect = 7.0e-66
Identity = 165/258 (63.95%), Postives = 179/258 (69.38%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+KPAVKDV+NNEK+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            S STSVNLQA NPSSDFLPT+PSSN PPAE  P+SDSL TEPSSSSLP E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR------- 180
           LPSSSG                         +++  P   +S      R K         
Sbjct: 121 LPSSSGT------------------------DRVPEPQSFYSRRHPANRRKSTETAAAPF 180

Query: 181 --------AQRGESRDGYNSPSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFS 240
                     RGE R   +SPS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFS
Sbjct: 181 VFSTASKILTRGEKRAADSSPSRARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFS 234

Query: 241 EVDAFELPVEEAKSSDSE 243
           EVDAFEL VEEAKSSDSE
Sbjct: 241 EVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Lag0030244 vs. NCBI nr
Match: XP_022991071.1 (cell wall protein RBR3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 261.5 bits (667), Expect = 7.0e-66
Identity = 165/243 (67.90%), Postives = 176/243 (72.43%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+KPAVKDV+NNEK+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            S STSVNLQA NPSSDFLPT+PSSN PPAE  P+SDSL TEPSSSSLP E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESR 180
           LPSSS       SF                    VF + S               RGE R
Sbjct: 121 LPSSSDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILT-----------RGEKR 180

Query: 181 DGYNSPSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSS 240
              +SPS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSS
Sbjct: 181 AADSSPSRARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSS 232

Query: 241 DSE 243
           DSE
Sbjct: 241 DSE 232

[Close]

BLAST of Lag0030244 vs. NCBI nr
Match: XP_022952551.1 (uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594.1 hypothetical protein SDJN03_07827, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033272.1 hypothetical protein SDJN02_07326 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.0 bits (663), Expect = 2.0e-65
Identity = 164/258 (63.57%), Postives = 180/258 (69.77%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDV+NNEK+G SS+
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL TEPSSSS+P E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR------- 180
           LPSSSG                         +++  P   +S      R K         
Sbjct: 121 LPSSSGT------------------------DRVPEPQSFYSRRHPANRRKSTETAAAPF 180

Query: 181 --------AQRGESRDGYNSPSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFS 240
                     RGE R   +SPS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFS
Sbjct: 181 IFSTASKILSRGEKRAADSSPSRARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFS 234

Query: 241 EVDAFELPVEEAKSSDSE 243
           EVDAFEL VEEAKSSDSE
Sbjct: 241 EVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Lag0030244 vs. ExPASy TrEMBL
Match: A0A6J1JPQ1 (cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.4e-66
Identity = 165/243 (67.90%), Postives = 176/243 (72.43%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+KPAVKDV+NNEK+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            S STSVNLQA NPSSDFLPT+PSSN PPAE  P+SDSL TEPSSSSLP E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESR 180
           LPSSS       SF                    VF + S               RGE R
Sbjct: 121 LPSSSDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILT-----------RGEKR 180

Query: 181 DGYNSPSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSS 240
              +SPS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSS
Sbjct: 181 AADSSPSRARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSS 232

Query: 241 DSE 243
           DSE
Sbjct: 241 DSE 232

[Close]

BLAST of Lag0030244 vs. ExPASy TrEMBL
Match: A0A6J1JRU8 (uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.4e-66
Identity = 165/258 (63.95%), Postives = 179/258 (69.38%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+KPAVKDV+NNEK+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            S STSVNLQA NPSSDFLPT+PSSN PPAE  P+SDSL TEPSSSSLP E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR------- 180
           LPSSSG                         +++  P   +S      R K         
Sbjct: 121 LPSSSGT------------------------DRVPEPQSFYSRRHPANRRKSTETAAAPF 180

Query: 181 --------AQRGESRDGYNSPSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFS 240
                     RGE R   +SPS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFS
Sbjct: 181 VFSTASKILTRGEKRAADSSPSRARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFS 234

Query: 241 EVDAFELPVEEAKSSDSE 243
           EVDAFEL VEEAKSSDSE
Sbjct: 241 EVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Lag0030244 vs. ExPASy TrEMBL
Match: A0A6J1GKJ2 (uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455207 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 9.9e-66
Identity = 164/258 (63.57%), Postives = 180/258 (69.77%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDV+NNEK+G SS+
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL TEPSSSS+P E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGR------- 180
           LPSSSG                         +++  P   +S      R K         
Sbjct: 121 LPSSSGT------------------------DRVPEPQSFYSRRHPANRRKSTETAAAPF 180

Query: 181 --------AQRGESRDGYNSPSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFS 240
                     RGE R   +SPS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFS
Sbjct: 181 IFSTASKILSRGEKRAADSSPSRARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFS 234

Query: 241 EVDAFELPVEEAKSSDSE 243
           EVDAFEL VEEAKSSDSE
Sbjct: 241 EVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Lag0030244 vs. ExPASy TrEMBL
Match: A0A6J1GKK7 (uncharacterized protein LOC111455207 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455207 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.2e-65
Identity = 163/243 (67.08%), Postives = 177/243 (72.84%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MESQKRNLR RKPL+DCTNT+LSSQS ASN SAAIKPRKRV+K AVKDV+NNEK+G SS+
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            S STSVNLQA NPSS+FLPT+PSSN PPAE NPSSDSL TEPSSSS+P E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIKGRAQRGESR 180
           LPSSS       SF                    +F + S               RGE R
Sbjct: 121 LPSSSDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKI-----------LSRGEKR 180

Query: 181 DGYNSPSKARTVPYRKRQR-AIYGEDESKIELPREFVEQQKAYFSEVDAFELPVEEAKSS 240
              +SPS+ARTVPYRKRQR  IYGEDESKIELPREFVE+QKAYFSEVDAFEL VEEAKSS
Sbjct: 181 AADSSPSRARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSS 232

Query: 241 DSE 243
           DSE
Sbjct: 241 DSE 232

[Close]

BLAST of Lag0030244 vs. ExPASy TrEMBL
Match: A0A5A7U9W2 (Vitellogenin-2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001540 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.3e-62
Identity = 162/253 (64.03%), Postives = 179/253 (70.75%), Query Frame = 0


Query: 1   MESQKRNLRARKPLSDCTNTILSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSV 60
           MES KRNLRARKPL+DCTNTILSSQSPASNFSA+IKPRKRV K AVKDV NN+KKGE  +
Sbjct: 1   MESHKRNLRARKPLADCTNTILSSQSPASNFSASIKPRKRVSKSAVKDVANNQKKGEPVL 60

Query: 61  PSESTSVNLQAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSD 120
            SESTSVNL+A NPSS+FLP EP+S+ PPAEPNPS DS  +EPSSS  PTE STP R +D
Sbjct: 61  ASESTSVNLRASNPSSEFLPPEPTSDVPPAEPNPSFDSFPSEPSSSRFPTEFSTPPRPAD 120

Query: 121 LPSSSGNRTFWYSFPCYDVGVWPLILLAGLLEQIVF----PSPSHSTVEGTLR-----IK 180
           LPSSSG  T   S P                 Q V+    PS    +VE  L        
Sbjct: 121 LPSSSG--TDGVSEP-----------------QTVYSRRHPSNKRKSVEKALEPFILYTA 180

Query: 181 GRAQR-GESRDGYNSPSKARTVPYRKRQRA-IYGEDESKIELPREFVEQQKAYFSEVDAF 240
            + Q  G  RD  NSPSKARTVP  KRQRA ++ ED+S +ELPREFVEQQK YFSEVDAF
Sbjct: 181 SKIQNGGRIRDDNNSPSKARTVPCNKRQRASLHEEDDSNLELPREFVEQQKTYFSEVDAF 234

Query: 241 ELPVEEAKSSDSE 243
           ELPVEEAKSSDSE
Sbjct: 241 ELPVEEAKSSDSE 234

[Close]

BLAST of Lag0030244 vs. TAIR 10
Match: AT3G56250.1 (unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Bacteria - 6; Metazoa - 18; Fungi - 20; Plants - 21; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-08
Identity = 65/237 (27.43%), Postives = 103/237 (43.46%), Query Frame = 0


Query: 11  RKPLSDCTNTI-LSSQSPASNFSAAIKPRKRVIKPAVKDVLNNEKKGESSVPSESTSVNL 70
           RKPL+DCTNT+  SSQ  +S+   A       +K  V+     EK     V + +T+  +
Sbjct: 13  RKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEK--PKDVNTSATAPEI 72

Query: 71  QAPNPSSDFLPTEPSSNSPPAEPNPSSDSLFTEPSSSSLPTEASTPSRRSDLPSSSGNRT 130
            +   ++D  P                    T   S+ L + AS PSR     S  G   
Sbjct: 73  ASRPITTDVRPV-------------------TRRMSADLASPASAPSRPQTSRSDMGVSD 132

Query: 131 FWYSFPCYDVGVWPLILLAGLLEQIVFPSPSHSTVEGTLRIK---GRAQRGESRDGYNSP 190
             ++ P      W +  +            + S+     RI+     +   ++R    + 
Sbjct: 133 KDFTEP------WSVYTVRRKASGQKRSKDASSSTSAAARIRLDLSSSSGKKTRQASENK 192

Query: 191 SKARTVPYRKRQRAIYGEDESKIELP-REFVEQQKAYFSEVDAFELPVEEAKSSDSE 243
            K   V  +KRQR +  E E  +    ++++E+QKAYF+E+DAFELPVEE  +SDS+
Sbjct: 193 KKTLKVAPKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDSD 222

The following BLAST results are available for this feature:

BLAST of Lag0030244 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515045.1	5.4e-66	64.34	uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023515126.1	7.0e-66	67.90	uncharacterized protein LOC111779162 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022991070.1	7.0e-66	63.95	uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima]	[more]
XP_022991071.1	7.0e-66	67.90	cell wall protein RBR3-like isoform X2 [Cucurbita maxima]	[more]
XP_022952551.1	2.0e-65	63.57	uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594...	[more]

BLAST of Lag0030244 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0030244 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JPQ1	3.4e-66	67.90	cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114877...	[more]
A0A6J1JRU8	3.4e-66	63.95	uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GKJ2	9.9e-66	63.57	uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GKK7	2.2e-65	67.08	uncharacterized protein LOC111455207 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7U9W2	1.3e-62	64.03	Vitellogenin-2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Lag0030244 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56250.1	4.2e-08	27.43	unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Ba...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..32
None	No IPR available	PANTHER	PTHR35740:SF1	OS12G0111700 PROTEIN	coord: 2..242
None	No IPR available	PANTHER	PTHR35740	OS12G0111700 PROTEIN	coord: 2..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0030244.1	Lag0030244.1	mRNA