Lag0030174 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0030174
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	basic leucine zipper 43-like
Location	chr8: 45122080 .. 45122619 (+)
RNA-Seq Expression	Lag0030174
Synteny	Lag0030174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCCTGGTGAAGTCACAGGTCTCCAATATCTCATCCCCTCCAATTTATCTCCATATGCTAATCATTTTCCCATGGCTCAGAACAATTTACCTATAATGCAACTTAACCAATTCTCCAATCCTTTATATAATTTCCAAGGTCCTTCTCAAGTTCAAGATTTCAATCGACAGTCATGCTTGAGTAGCAATTCAACTTCTGATGAAGCGGATGAGCAACAGCAAAGCCTCATCAATGAGAGGAAGCAGAGAAGGATGATATCCAATAGAGAGTCTGCACGTCGGTCACGTATGCGCAAGCAGAAGCATTTGGATGAGCTATGGTCTCAAGTGGTTTGGCTTCGGAATGAGAATCATCAGCTTATAGATAAGCTGAACCAAGTTTCAGACTGCCATGACAAGGTTGTTCAAGAAAATGCTCGACTCAAAGAGCAGACTTCTGAACTCCGTCGAATGCTCACAGACCTACAGGTCAATAGTCCTTACCCCAACTTCAGAGAACTTGAAGATATCCCCCCCAACACACCATCCGAGAGCTGA

mRNA sequence

ATGCAGCCTGGTGAAGTCACAGGTCTCCAATATCTCATCCCCTCCAATTTATCTCCATATGCTAATCATTTTCCCATGGCTCAGAACAATTTACCTATAATGCAACTTAACCAATTCTCCAATCCTTTATATAATTTCCAAGGTCCTTCTCAAGTTCAAGATTTCAATCGACAGTCATGCTTGAGTAGCAATTCAACTTCTGATGAAGCGGATGAGCAACAGCAAAGCCTCATCAATGAGAGGAAGCAGAGAAGGATGATATCCAATAGAGAGTCTGCACGTCGGTCACGTATGCGCAAGCAGAAGCATTTGGATGAGCTATGGTCTCAAGTGGTTTGGCTTCGGAATGAGAATCATCAGCTTATAGATAAGCTGAACCAAGTTTCAGACTGCCATGACAAGGTTGTTCAAGAAAATGCTCGACTCAAAGAGCAGACTTCTGAACTCCGTCGAATGCTCACAGACCTACAGGTCAATAGTCCTTACCCCAACTTCAGAGAACTTGAAGATATCCCCCCCAACACACCATCCGAGAGCTGA

Coding sequence (CDS)

ATGCAGCCTGGTGAAGTCACAGGTCTCCAATATCTCATCCCCTCCAATTTATCTCCATATGCTAATCATTTTCCCATGGCTCAGAACAATTTACCTATAATGCAACTTAACCAATTCTCCAATCCTTTATATAATTTCCAAGGTCCTTCTCAAGTTCAAGATTTCAATCGACAGTCATGCTTGAGTAGCAATTCAACTTCTGATGAAGCGGATGAGCAACAGCAAAGCCTCATCAATGAGAGGAAGCAGAGAAGGATGATATCCAATAGAGAGTCTGCACGTCGGTCACGTATGCGCAAGCAGAAGCATTTGGATGAGCTATGGTCTCAAGTGGTTTGGCTTCGGAATGAGAATCATCAGCTTATAGATAAGCTGAACCAAGTTTCAGACTGCCATGACAAGGTTGTTCAAGAAAATGCTCGACTCAAAGAGCAGACTTCTGAACTCCGTCGAATGCTCACAGACCTACAGGTCAATAGTCCTTACCCCAACTTCAGAGAACTTGAAGATATCCCCCCCAACACACCATCCGAGAGCTGA

Protein sequence

MQPGEVTGLQYLIPSNLSPYANHFPMAQNNLPIMQLNQFSNPLYNFQGPSQVQDFNRQSCLSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNQVSDCHDKVVQENARLKEQTSELRRMLTDLQVNSPYPNFRELEDIPPNTPSES

Homology

[Close]

BLAST of Lag0030174 vs. NCBI nr
Match: XP_022134030.1 (basic leucine zipper 43-like [Momordica charantia])

HSP 1 Score: 330.9 bits (847), Expect = 7.0e-87
Identity = 168/179 (93.85%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MQPGEVTGLQYLIPSNLSPYANHFPMAQNNLPIMQLNQFSNPLYNFQGPSQVQDFNRQSC 60
           MQPGEVTGLQYL+P NLSPYA HFPMAQNNLP MQLNQFS+PLYNFQ PSQVQ+FNRQ C
Sbjct: 1   MQPGEVTGLQYLVPPNLSPYATHFPMAQNNLPTMQLNQFSSPLYNFQVPSQVQEFNRQPC 60

Query: 61  LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ 120
           LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ
Sbjct: 61  LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ 120

Query: 121 LIDKLNQVSDCHDKVVQENARLKEQTSELRRMLTDLQVNSPYPNFRELEDIPPNTPSES 180
           LIDKLNQVSDCHD+V+QENARLKEQTSELRRMLTDLQVNSPYPNFRELEDIPPNT SES
Sbjct: 121 LIDKLNQVSDCHDRVIQENARLKEQTSELRRMLTDLQVNSPYPNFRELEDIPPNTTSES 179

[Close]

BLAST of Lag0030174 vs. NCBI nr
Match: XP_038889727.1 (basic leucine zipper 43-like [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 164/179 (91.62%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MQPGEVTGLQYLIPSNLSPYANHFPMAQNNLPIMQLNQFSNPLYNFQGPSQVQDFNRQSC 60
           MQPGEVT LQYLIPSNLSPYA HFPMAQNNLP MQLN+F+NPLYNFQGPSQV +FNRQ C
Sbjct: 1   MQPGEVTSLQYLIPSNLSPYATHFPMAQNNLPTMQLNEFANPLYNFQGPSQVHEFNRQPC 60

Query: 61  LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ 120
           LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ
Sbjct: 61  LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ 120

Query: 121 LIDKLNQVSDCHDKVVQENARLKEQTSELRRMLTDLQVNSPYPNFRELEDIPPNTPSES 180
           LIDKLNQVSDCHDKVVQENA+LKEQT ELRRM+T+LQVN+ YPNFRELE IPPNTPSES
Sbjct: 121 LIDKLNQVSDCHDKVVQENAQLKEQTLELRRMITELQVNNHYPNFRELEKIPPNTPSES 179

[Close]

BLAST of Lag0030174 vs. NCBI nr
Match: ADN34279.1 (bZIP transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 322.4 bits (825), Expect = 2.5e-84
Identity = 164/179 (91.62%), Postives = 170/179 (94.97%), Query Frame = 0


Query: 1   MQPGEVTGLQYLIPSNLSPYANHFPMAQNNLPIMQLNQFSNPLYNFQGPSQVQDFNRQSC 60
           MQPGEVT LQYLIPSNLSPYA HFPMAQNNLP MQLN+FSNPLYNFQGPSQV DFNRQ C
Sbjct: 1   MQPGEVTSLQYLIPSNLSPYATHFPMAQNNLPTMQLNEFSNPLYNFQGPSQVHDFNRQPC 60

Query: 61  LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ 120
           LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQV+WLRNENHQ
Sbjct: 61  LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQ 120

Query: 121 LIDKLNQVSDCHDKVVQENARLKEQTSELRRMLTDLQVNSPYPNFRELEDIPPNTPSES 180
           LIDKLNQVSDCHDKVVQEN +LKEQTSELRRMLT+LQVN+ YP FRELE IPPN+PSES
Sbjct: 121 LIDKLNQVSDCHDKVVQENVQLKEQTSELRRMLTELQVNNHYPKFRELEKIPPNSPSES 179

[Close]

BLAST of Lag0030174 vs. NCBI nr
Match: XP_022958319.1 (basic leucine zipper 43-like [Cucurbita moschata])

HSP 1 Score: 318.9 bits (816), Expect = 2.7e-83
Identity = 162/179 (90.50%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MQPGEVTGLQYLIPSNLSPYANHFPMAQNNLPIMQLNQFSNPLYNFQGPSQVQDFNRQSC 60
           MQPGEVTGLQYLIPSNLS YAN+FPMAQNNLP++QLNQFSNPL+NFQG +Q+QDFNR  C
Sbjct: 1   MQPGEVTGLQYLIPSNLSAYANNFPMAQNNLPMVQLNQFSNPLHNFQGTTQIQDFNRHPC 60

Query: 61  LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ 120
           LSS STSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ
Sbjct: 61  LSSYSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ 120

Query: 121 LIDKLNQVSDCHDKVVQENARLKEQTSELRRMLTDLQVNSPYPNFRELEDIPPNTPSES 180
           LIDKLNQVSDCHDKVVQENA+LKEQTS+LR+MLT+LQVNSPYPNFRE+EDI PNTPSES
Sbjct: 121 LIDKLNQVSDCHDKVVQENAQLKEQTSKLRQMLTELQVNSPYPNFREIEDITPNTPSES 179

[Close]

BLAST of Lag0030174 vs. NCBI nr
Match: XP_023526794.1 (basic leucine zipper 43-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.4 bits (812), Expect = 8.0e-83
Identity = 161/179 (89.94%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 1   MQPGEVTGLQYLIPSNLSPYANHFPMAQNNLPIMQLNQFSNPLYNFQGPSQVQDFNRQSC 60
           MQPGEVTGLQYLIPSNLS YAN+FPM QNNLP++QLNQFSNPL+NFQG +Q+QDFNR  C
Sbjct: 1   MQPGEVTGLQYLIPSNLSAYANNFPMTQNNLPMVQLNQFSNPLHNFQGTTQIQDFNRHPC 60

Query: 61  LSSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ 120
           LSS STSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ
Sbjct: 61  LSSYSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQ 120

Query: 121 LIDKLNQVSDCHDKVVQENARLKEQTSELRRMLTDLQVNSPYPNFRELEDIPPNTPSES 180
           LIDKLNQVSDCHDKVVQENA+LKEQTS+LR+MLT+LQVNSPYPNFRE+EDI PNTPSES
Sbjct: 121 LIDKLNQVSDCHDKVVQENAQLKEQTSKLRQMLTELQVNSPYPNFREIEDITPNTPSES 179

[Close]

BLAST of Lag0030174 vs. ExPASy Swiss-Prot
Match: Q9FMC2 (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-30
Identity = 83/175 (47.43%), Postives = 114/175 (65.14%), Query Frame = 0


Query: 1   MQPG-EVTGLQYLIPSNLSPYANHFPMAQNNLPIMQLNQFSNPLYNFQGPSQVQDFNRQS 60
           MQP   +  L    PS LS      P    N          NP ++F+       F   S
Sbjct: 1   MQPSTNIFSLHGCPPSYLSHIPTSSPFCGQN---------PNPFFSFETGVNTSQF--MS 60

Query: 61  CLSS-NSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNEN 120
            +SS NSTSDEA+E  + +INERKQ+R ISNRESARRSRMRKQ+ +DELWSQV+WLR+EN
Sbjct: 61  LISSNNSTSDEAEENHKEIINERKQKRKISNRESARRSRMRKQRQVDELWSQVMWLRDEN 120

Query: 121 HQLIDKLNQVSDCHDKVVQENARLKEQTSELRRMLTDLQV--NSPYPNFRELEDI 172
           HQL+ KLN V +  +KV++EN +LKE+T+EL++M++D+Q+   SP+   R+ +D+
Sbjct: 121 HQLLRKLNCVLESQEKVIEENVQLKEETTELKQMISDMQLQNQSPFSCIRDDDDV 164

[Close]

BLAST of Lag0030174 vs. ExPASy Swiss-Prot
Match: Q9CA46 (Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-18
Identity = 47/97 (48.45%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 63  SNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLI 122
           SN  +   D  + +  NERK+RR +SNRESARRSRMRKQ+H++ELWS +V L N+N  L+
Sbjct: 29  SNLPATSDDSSRTAEDNERKRRRKVSNRESARRSRMRKQRHMEELWSMLVQLINKNKSLV 88

Query: 123 DKLNQVSDCHDKVVQENARLKEQTSELRRMLTDLQVN 160
           D+L+Q  +C++KV++EN +L+E+ S+ R+M+ ++ +N
Sbjct: 89  DELSQARECYEKVIEENMKLREENSKSRKMIGEIGLN 125

[Close]

BLAST of Lag0030174 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.5e-11
Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 59  SCLSSNSTSDEADEQQQS---LINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLR 118
           S   S+S+SD  +         ++ERK++RM+SNRESARRSRMRKQKH+D+L +Q+  L 
Sbjct: 6   STYRSSSSSDGGNNNPSDSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLS 65

Query: 119 NENHQLIDKLNQVSDCHDKVVQENARLKEQTSELRRMLTDL 157
           N+N Q+++ L   S  + K+  EN+ L  Q  EL   L  L
Sbjct: 66  NDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSL 106

[Close]

BLAST of Lag0030174 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.5e-11
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0


Query: 65  STSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDK 124
           ++  E+D +Q+ LI+ERK++R  SNRESARRSRMRKQKHLD+L +QV  LR EN Q++  
Sbjct: 25  NSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLRKENAQIVAG 84

Query: 125 LNQVSDCHDKVVQENARLKEQTSELRRMLTDL 157
           +   +  +  +  EN  L+ Q  EL   L  L
Sbjct: 85  IAVTTQHYVTIEAENDILRAQVLELNHRLQSL 116

[Close]

BLAST of Lag0030174 vs. ExPASy Swiss-Prot
Match: O65683 (bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 39/95 (41.05%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 62  SSNSTSDEADEQQQSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQL 121
           +++ST   +   ++SL+ +RK++RM+SNRESARRSRM+KQK LD+L +QV  L+ EN ++
Sbjct: 8   TTSSTIQTSSGSEESLMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQVNHLKKENTEI 67

Query: 122 IDKLNQVSDCHDKVVQENARLKEQTSELRRMLTDL 157
           +  ++  +  +  V  EN+ L+ Q  EL   L  L
Sbjct: 68  VTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSL 102

The following BLAST results are available for this feature:

BLAST of Lag0030174 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134030.1	7.0e-87	93.85	basic leucine zipper 43-like [Momordica charantia]	[more]
XP_038889727.1	1.4e-84	91.62	basic leucine zipper 43-like [Benincasa hispida]	[more]
ADN34279.1	2.5e-84	91.62	bZIP transcription factor [Cucumis melo subsp. melo]	[more]
XP_022958319.1	2.7e-83	90.50	basic leucine zipper 43-like [Cucurbita moschata]	[more]
XP_023526794.1	8.0e-83	89.94	basic leucine zipper 43-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0030174 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMC2	1.6e-30	47.43	Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1	[more]
Q9CA46	1.9e-18	48.45	Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1	[more]
Q9SI15	6.5e-11	43.56	bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1	[more]
C0Z2L5	6.5e-11	46.74	bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1	[more]
O65683	3.5e-09	41.05	bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	GENE3D	1.20.5.170		coord: 79..136 e-value: 7.2E-17 score: 63.1
None	No IPR available	PANTHER	PTHR46324:SF26	BZIP PROTEIN (ATBZIP48)	coord: 1..175
None	No IPR available	CDD	cd14702	bZIP_plant_GBF1	coord: 82..133 e-value: 1.69424E-19 score: 75.6481
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 81..130
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 77..141 e-value: 1.6E-14 score: 64.2
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 81..135 e-value: 8.9E-14 score: 51.3
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 84..99
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 79..142 score: 10.357865
IPR044521	Basic leucine zipper 8/43	PANTHER	PTHR46324	BASIC LEUCINE ZIPPER 43-RELATED	coord: 1..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0030174.1	Lag0030174.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity