Lag0029549 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCATTGACCGCATCTTGGACGTTGGGCTGGGCCTCTGGGCTGCACAGAACGAGATGGGATTGGGCTGCTGAAGGGATAACAGGAACTGGGTGGGTTCGGTTCGGTTTTTTTATCGGAAAAATTTCGGCTTTTTGATCAGCAGCATTGAAGCCTAAGGGAGAAGAGGGAGAAAATCGAGTCGAGAGTGGCAAACAAGAACGTTATGTGGAAGTGACTTTGTAAATTTGGAATCCCTTTCTTTTTTGGTGAAATTTTCAAGTGTTTGAAGAGTTTGAATTGAAGGAAAAGCGAGAATGGAGGACGAATCTGGGCGAGCGATTAGGCTAATGAATTTCGTCTCTGAGGAACAGGTTCTTTCTCTTCCCATTCTTTTCTTTGATTGATTCATACTATAAGATTTTTGGGGTTCTTTTTCTTTTTTTGAAATTAATGCAAATATATTGGTTTTTGCAGCTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTTTACGAGGTTCTTTAATGTTTATTCACTTTTACAGCCTGATTATAAATTCTGTTAGTGGAATGAAAAGGAAATATCTGCTCAGGCCATTTCATTTATACCCCTTATGCACAGTAAGTTGTAAAAGTATGTGAGTGTTATTTCAGCTTAGCAAGTGGTGGGAGATCTTATAGGAAAAAATAAGGTTCAATTACAAGTTTATTCCTTGAAATTTGTTTGTTTTTAGTAGGTCTCTAAACTTTAAAAAGGTCTAATAAGCACTAAACTTTCTATTTTGTGTCTAATAAGTACCTAAACTTTAGAAGTGTCTAATAGATCTTGAACTTTCGATTTTGTTTCTAATAGGTCTTTAGCATATTTTATAATTTTAAAAATTAATGGACCGAATTTTTTAAAATGTCGAATATGGAAATTACCTATTGGATACAAATTGAGAGTTTAGAGACTTACTGGACACAAAATTACAATTTGTAATTTAGCGAATCACAAATCATTACCACAATGTATATGTCTGCTGGCTGTCATTCCAAACATTTGAGAACCAGTGGCTTGAGGGCATTTTTTATTTACAGCTCTGATGCCAAATGAAACTTTGGTTTTTGGCTTGAGAGGCTTGGAGTGTCCCTTTAACAGTGGGATTTTTGCATTTCATTGTTACTTAGTACCCAAATAAATCGAGTAATTAAGAGAAGTAACATTAAGTTGTTGAGATAGAATTATGGATCATTGATAGTTGGTTGAGTTTTTTAACTAAGAGAAGTCCATCTACGAAATTGGATTGGAAATATTTCTCAGTTTATACAGATTGCCATTGAGCCTTATGTCTTTATTCTGTGTGAATGATATATTTTACTAGACAGTAGTCACTTTCTCTTTTATGATGTAAACTTTTTAGTGACCATATGATATCAAATAACAATTTTTCATGACTTATTTAAAACTATATTGTTAATATTCAAGCCTTATGTCTTTACTCACTGTGCTTGTAAGGCCTGTTTTTGTAATCTTTCACTCTTCAAATTTATATGTATGTATTCCATGTTCGAGCATTTGAGTGCATAGATTTGAACATTTTTGTTGTTAACTACATTTCTCTTTATGTTTGCAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGTGAGTGCTGAAGTGTAATATCAATCTTGTTCTTGATGATAACTCATATAATTGTTATTATTTAAATATTTAGTATAGATCCAATAAATGTTGCCAGACGGCACAAATGAGCAAAGATACAAGATTACATCCATGCCTATCATGCAAGGATTAAGATTCATGCTTATTCAGCTCTTTTACTACAGGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACGGTGAGACTATTTTTTTTAACTTTTTACCCATAAGCATTGCATTGAAATTTGTTAATTAATTCAATATATCCAAATCAGGTTTAGTATTTAACACAAGATTGTAAATTTTTTCTTCTCTTTTCTGGGAATTATATCGTTGATTGTCATGCAGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAAGTAATTATCCTTATGGTCCACTGTAAACTTTCTATTACTTGTTTTTCTTTTTCGCGAATCACTGATATATTGTTCACTAGGGTGAAATTTACGGCATAACTATGAACAAGTGTTTTCCAATCAACTGTAATTTCAAATGCTCTAAAGTGTGGGTGGGTGGGGTATTCAGTATGTTGTGCTATATCAAGTCTAGTGGTAATGGCAATCTGTAACCCTTGAACCTTGATTAATGCACTATTCTGAAAACCCTGAAAGACATGTGCCTAAAAGGAACATGGAAATGAAACAAAAGACAAAGATGTCGAGGGCTATTAGTCTAATGACAAGAAAAATGAGGATAAGGACATATTTAGTATTTAGTGTTATGAGTTATAATTTTAAGTCTTTGCATGACTGTTTACTCTTTGTTGTTAAGAGATCCATAATACTTGAATTTTGTTTGTATTTCTTTATTTCTTATATCTCATGTACTGTTTCTTTTATCTTGTTTGCTTCAACTCACTGAAATCATCACTTCTTATTGGTGCATTACACTTGAGCTTCAGAGCGTTGTTGCACATCAATGCACTTCGTGTTTAAAGAACATCGGAATAATGTAACAATTTATTAAATGTTTGTATAGTAGTGGCAACAGCTGAACCATGATCTTACTCTAGAGTCTAGATATATTACTGCAGAAGAGATCATCATTGTAGCATCTGAGTTTATTAGTCATCTCTAGCATTGATATAGCTCCAGATTAACAAGCACTGAAAAAATGATGGCTGTTCTTCAGTGGGTTTAGGGTCATGAAGGAAGTCCACATCAAGTGGAACAAGTTACCAATTCAAGTGCCAGTGTTTCCCTTGTAATTGATTAGATGCAGCAGCATCAATTAATGTTGCTTGTAGCCTCAGTGTTGGTTATGGAGATTTCCTGCGACTCTTTATACTTCAATTATTTATCACGATGAGACAGTCTTTTTTTTGCAACAATTTGTTAATAACTGATGAAAGTTGCAGAAAAGTGGACATCTACCTGTAGGAACAGTAGGAACATTCTTCTTACCAATGTAAATAATCAATTTGCACGCTTGTAATTCTGTTTTAGGTTGCCTGTTGCTTTCTGCTTAGTGATATTACCTGTTCACAATGTACATGAATACTAAACGCAAGTGCCCACTTTTGAGTTTCTTCTCAAGCACTGTTTCTTGGTGTTCTTTCAGGCAGCAGTAGCAGCACAATCTATTATGTTGAATGAACTGAAGGAAATAACCCCGCCGGCTCCAGCAGCTCAGGTTGGTTTAGTTCAAATTCTACGCGCTTCCGGTAACTTTTGGTGCGGGTAGTCACATCATGAATGATCAATCTATAATTCCGGTACTGAAATGCATTACTATTGACTAAAAGACATCACAGATTCCTACATTATTAGGTGTTTTATTGGAATGTGAAGTGTGCTAAGTGGTGCCTAGCTTGTGTCTCGCAAGATTTCTATCTAATGTATTTGTACATACAAGGGTGTGAGTTCATTCATCGTCACGGTCTGTTCTGTTCTTTTTGGTCGAGACCTGATCAAGCTGCTGCTGTAATGAAGGTTCCATTATATCAATGGCCACCTGATGTGGACCCTCAACTGTTTGCAGGAAAAAGCACCAGTTAGGAGAGAAACTCCGGTGACTCGACCCCCGAGTATGATTATTAAAGTAAAGCCACAGGCGAAGAAAGCGAGGATCGAACCCAGAAGCCCAGAAAGAGCTGGTGGCAAGGCTCAAGTCCCTGTTGCTATAGCAGAGGAGCCCTCAGAATCAGCAAAAACAGCTGATACAGTTAGTGATAGGCCTCTTGAAGCTGTTGCAACAGGCTTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAG ATGCCATTGACCGCATCTTGGACGTTGGGCTGGGCCTCTGGGCTGCACAGAACGAGATGGGATTGGGCTGCTGAAGGGATAACAGGAACTGGGTGGGTTCGGTTCGGAAAAGCGAGAATGGAGGACGAATCTGGGCGAGCGATTAGGCTAATGAATTTCGTCTCTGAGGAACAGCTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTTTACGAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCTATTATGTTGAATGAACTGAAGGAAATAACCCCGCCGGCTCCAGCAGCTCAGGAAAAAGCACCAGTTAGGAGAGAAACTCCGGTGACTCGACCCCCGAGTATGATTATTAAAGTAAAGCCACAGGCGAAGAAAGCGAGGATCGAACCCAGAAGCCCAGAAAGAGCTGGTGGCAAGGCTCAAGTCCCTGTTGCTATAGCAGAGGAGCCCTCAGAATCAGCAAAAACAGCTGATACAGTTAGTGATAGGCCTCTTGAAGCTGTTGCAACAGGCTTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAG ATGCCATTGACCGCATCTTGGACGTTGGGCTGGGCCTCTGGGCTGCACAGAACGAGATGGGATTGGGCTGCTGAAGGGATAACAGGAACTGGGTGGGTTCGGTTCGGAAAAGCGAGAATGGAGGACGAATCTGGGCGAGCGATTAGGCTAATGAATTTCGTCTCTGAGGAACAGCTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTTTACGAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCTATTATGTTGAATGAACTGAAGGAAATAACCCCGCCGGCTCCAGCAGCTCAGGAAAAAGCACCAGTTAGGAGAGAAACTCCGGTGACTCGACCCCCGAGTATGATTATTAAAGTAAAGCCACAGGCGAAGAAAGCGAGGATCGAACCCAGAAGCCCAGAAAGAGCTGGTGGCAAGGCTCAAGTCCCTGTTGCTATAGCAGAGGAGCCCTCAGAATCAGCAAAAACAGCTGATACAGTTAGTGATAGGCCTCTTGAAGCTGTTGCAACAGGCTTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAG MPLTASWTLGWASGLHRTRWDWAAEGITGTGWVRFGKARMEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETPVTRPPSMIIKVKPQAKKARIEPRSPERAGGKAQVPVAIAEEPSESAKTADTVSDRPLEAVATGLVSYSDESEDED Homology
BLAST of Lag0029549 vs. NCBI nr
Match: TYJ98134.1 (protein FAM192A [Cucumis melo var. makuwa]) HSP 1 Score: 344.7 bits (883), Expect = 6.5e-91 Identity = 197/246 (80.08%), Postives = 211/246 (85.77%), Query Frame = 0
BLAST of Lag0029549 vs. NCBI nr
Match: XP_008466362.1 (PREDICTED: protein FAM192A [Cucumis melo] >KAA0050273.1 protein FAM192A [Cucumis melo var. makuwa]) HSP 1 Score: 343.6 bits (880), Expect = 1.5e-90 Identity = 190/213 (89.20%), Postives = 201/213 (94.37%), Query Frame = 0
BLAST of Lag0029549 vs. NCBI nr
Match: XP_023549588.1 (protein FAM192A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 342.8 bits (878), Expect = 2.5e-90 Identity = 188/213 (88.26%), Postives = 201/213 (94.37%), Query Frame = 0
BLAST of Lag0029549 vs. NCBI nr
Match: XP_022993730.1 (protein FAM192A [Cucurbita maxima]) HSP 1 Score: 339.0 bits (868), Expect = 3.6e-89 Identity = 187/213 (87.79%), Postives = 200/213 (93.90%), Query Frame = 0
BLAST of Lag0029549 vs. NCBI nr
Match: XP_022938625.1 (uncharacterized protein LOC111444804 [Cucurbita moschata]) HSP 1 Score: 339.0 bits (868), Expect = 3.6e-89 Identity = 187/213 (87.79%), Postives = 200/213 (93.90%), Query Frame = 0
BLAST of Lag0029549 vs. ExPASy Swiss-Prot
Match: Q91WE2 (PSME3-interacting protein OS=Mus musculus OX=10090 GN=Psme3ip1 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 7.9e-07 Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 0
BLAST of Lag0029549 vs. ExPASy Swiss-Prot
Match: Q9GZU8 (PSME3-interacting protein OS=Homo sapiens OX=9606 GN=PSME3IP1 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.0e-06 Identity = 43/128 (33.59%), Postives = 64/128 (50.00%), Query Frame = 0
BLAST of Lag0029549 vs. ExPASy TrEMBL
Match: A0A5D3BGC9 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00120 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 3.2e-91 Identity = 197/246 (80.08%), Postives = 211/246 (85.77%), Query Frame = 0
BLAST of Lag0029549 vs. ExPASy TrEMBL
Match: A0A5A7U2Y6 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G001250 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 7.0e-91 Identity = 190/213 (89.20%), Postives = 201/213 (94.37%), Query Frame = 0
BLAST of Lag0029549 vs. ExPASy TrEMBL
Match: A0A1S3CR24 (protein FAM192A OS=Cucumis melo OX=3656 GN=LOC103503791 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 7.0e-91 Identity = 190/213 (89.20%), Postives = 201/213 (94.37%), Query Frame = 0
BLAST of Lag0029549 vs. ExPASy TrEMBL
Match: A0A6J1JZC4 (protein FAM192A OS=Cucurbita maxima OX=3661 GN=LOC111489642 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.7e-89 Identity = 187/213 (87.79%), Postives = 200/213 (93.90%), Query Frame = 0
BLAST of Lag0029549 vs. ExPASy TrEMBL
Match: A0A6J1FKA5 (uncharacterized protein LOC111444804 OS=Cucurbita moschata OX=3662 GN=LOC111444804 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.7e-89 Identity = 187/213 (87.79%), Postives = 200/213 (93.90%), Query Frame = 0
BLAST of Lag0029549 vs. TAIR 10
Match: AT3G62140.1 (CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). ) HSP 1 Score: 223.8 bits (569), Expect = 1.6e-58 Identity = 133/216 (61.57%), Postives = 162/216 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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