Lag0029529 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0029529
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Locationchr8: 39836245 .. 39837172 (+)
RNA-Seq ExpressionLag0029529
SyntenyLag0029529
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCAACTCCAAACGAAACCTCCCTGGATATGAATGCATTCAATTCCTTCATCACTGCAATCAATGAAAGAAACCCTGGAATCAGCAGTCTTATATGGGGATGGGGAACATCCACGCCATCAGAAGGCTTGCCAATTTACATCAAAATGGAGAGGCCTTCACCACCCAACAGCCCTCTGAATCTTGGGAAGACAATTCTCAGTCTTACTTTTCAGGCAATTTTAGCCTCGTTCATCAGTTCGCCCACTTCACCTCCACCACTTCCCACAATTCTCTTTACGGCTGCTATGTTGATGAGCTTTGCAGTTTCATTTGCTGGACTTAACCTTCCGAATGCATTCCCAAGAATCGCACTTTTGTTGGAAAAGTTCGGTGCTCTTTTGGCTGCAATTGGTATCTGCATAGTACCAAGTCTTCTAGTTCATCCAACTTGGATCTGCTGGCTGGCACTTGGCTCCATCTTGCTACCCTTTTTAATATCATTAAAGTGATTTTGACGGAAAAGCATCCCAATGTCCGATGAGGACAGAAGGAGCATTTCTATAGAATCCATGCCCAGTTGGTTGACCTCTTTTACAGTTTGTCTCTGGTTCTTGACCCGGTGTGTTTCATCACCAAGACAAAATCAGCTCCAATTTCCTGAAAATCATGTTATTATACAACTTACAATGACATGATAACTCTGCCTGTGTCATGCTTTAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGAGCACAGTTTGCAGTATTTTAATCTAAGTCGTAATAAAGATGGCAGCATCAAGAAAGATGGGCTCTCTCTATGGTGCATAGAGAGGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAA

mRNA sequence

ATGGCATCAACTCCAAACGAAACCTCCCTGGATATGAATGCATTCAATTCCTTCATCACTGCAATCAATGAAAGAAACCCTGGAATCAGCAGTCTTATATGGGGATGGGGAACATCCACGCCATCAGAAGGCTTGCCAATTTACATCAAAATGGAGAGGCCTTCACCACCCAACAGCCCTCTGAATCTTGGGAAGACAATTCTCAGTCTTACTTTTCAGGCAATTTTAGCCTCGTTCATCAGTTCGCCCACTTCACCTCCACCACTTCCCACAATTCTCTTTACGGCTGCTATGTTGATGAGCTTTGCAGTTTCATTTGCTGGACTTAACCTTCCGAATGCATTCCCAAGAATCGCACTTTTGTTGGAAAAGTTCGGTGCTCTTTTGGCTGCAATTGGTATCTGCATAGTACCAAGTCTTCTAGTTCATCCAACTTGGATCTGCTGGCTGGCACTTGGCTCCATCTTGCTACCCTTTTTAATATCATTAAACCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGAGCACAGTTTGCAGTATTTTAATCTAAGTCGTAATAAAGATGGCAGCATCAAGAAAGATGGGCTCTCTCTATGGTGCATAGAGAGGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAA

Coding sequence (CDS)

ATGGCATCAACTCCAAACGAAACCTCCCTGGATATGAATGCATTCAATTCCTTCATCACTGCAATCAATGAAAGAAACCCTGGAATCAGCAGTCTTATATGGGGATGGGGAACATCCACGCCATCAGAAGGCTTGCCAATTTACATCAAAATGGAGAGGCCTTCACCACCCAACAGCCCTCTGAATCTTGGGAAGACAATTCTCAGTCTTACTTTTCAGGCAATTTTAGCCTCGTTCATCAGTTCGCCCACTTCACCTCCACCACTTCCCACAATTCTCTTTACGGCTGCTATGTTGATGAGCTTTGCAGTTTCATTTGCTGGACTTAACCTTCCGAATGCATTCCCAAGAATCGCACTTTTGTTGGAAAAGTTCGGTGCTCTTTTGGCTGCAATTGGTATCTGCATAGTACCAAGTCTTCTAGTTCATCCAACTTGGATCTGCTGGCTGGCACTTGGCTCCATCTTGCTACCCTTTTTAATATCATTAAACCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGAGCACAGTTTGCAGTATTTTAATCTAAGTCGTAATAAAGATGGCAGCATCAAGAAAGATGGGCTCTCTCTATGGTGCATAGAGAGGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAA

Protein sequence

MASTPNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNSPLNLGKTILSLTFQAILASFISSPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRIALLLEKFGALLAAIGICIVPSLLVHPTWICWLALGSILLPFLISLNRSQARTKEEGSVIRPLDLELVLKDREHSLQYFNLSRNKDGSIKKDGLSLWCIERNHILLKLSHPKI
Homology
BLAST of Lag0029529 vs. NCBI nr
Match: KAG6601930.1 (hypothetical protein SDJN03_07163, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-38
Identity = 119/230 (51.74%), Postives = 132/230 (57.39%), Query Frame = 0

Query: 2   ASTPNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKME--RPSPPNS 61
           ++T  ETSLDM                 SSL WGWG STP E   I IKM   RP P NS
Sbjct: 3   SATQQETSLDM-----------------SSLTWGWGLSTPLEFQSINIKMHSPRPQPANS 62

Query: 62  PLNLGKTILSLTFQAILASFISSPT-SPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRI 121
           P NLGKTIL+LTFQAILA  IS+PT S  PLPT+LF AAM +SF VSFAG+ L N FPRI
Sbjct: 63  PRNLGKTILNLTFQAILALSISAPTPSSSPLPTVLFRAAMFISFQVSFAGVFLKNVFPRI 122

Query: 122 ALLLEKFGALLAAIGICIVPSLLVHPTWICWLALGSILLPFLISLNRSQARTKEEGSVIR 181
           ALLLEK GAL  AIG+C                         IS    +  TKEEG VIR
Sbjct: 123 ALLLEKLGALFLAIGVC-------------------------ISGAGPKPGTKEEGGVIR 180

Query: 182 PLDLELVLKDREHSLQYFNL-SRNKDGSIKKDGLSLWCIERNHILLKLSH 228
           PL+L+ VL     S QYF+  S NKDGS+  DG        NHILLKLSH
Sbjct: 183 PLELQRVL---NCSCQYFHFSSSNKDGSVAIDG-------SNHILLKLSH 180

BLAST of Lag0029529 vs. NCBI nr
Match: XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia])

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-37
Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 0

Query: 1   MASTPNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNSP 60
           MASTP +TS+DMNA +SFITAINERN GISS  WG GTSTPS+ LPI I+M+RP P  S 
Sbjct: 1   MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60

Query: 61  LNLGKTILSLTFQAILASFISSPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRIAL 120
            +LGKTIL LTFQA+LA FIS P+SPP LPT+LF AA+L+SFAVSFAGL L  A+PR+AL
Sbjct: 61  QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMAL 120

Query: 121 LLEK 125
           L EK
Sbjct: 121 LFEK 124

BLAST of Lag0029529 vs. NCBI nr
Match: KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 9.4e-36
Identity = 97/166 (58.43%), Postives = 114/166 (68.67%), Query Frame = 0

Query: 1   MAST-PNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNS 60
           MA T P+E SLDMN  NS I A+  RNPGISS  WG      S+ LPIYIKM+RPSP NS
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWG---GAASDCLPIYIKMQRPSPVNS 60

Query: 61  PLNLGKTILSLTFQAILASFIS-SPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRI 120
           P   G T LSLTFQAI+  F+S +P+S  PLP+ LF A ML SF  S+ G+ L   FP+ 
Sbjct: 61  P-QFGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKT 120

Query: 121 ALLLEKFGALLAAIGICIVPSLLVHP--TWICWLALGSILLPFLIS 163
           A LL+ FGAL AAIG CI+ SLL++P  TWICWLA G IL  F+IS
Sbjct: 121 AQLLQTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIIS 162

BLAST of Lag0029529 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-34
Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 0

Query: 12  MNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNSPL---NLGKTIL 71
           MN   SFITAINERNP I+S             LPI I M+RPSP NS     N+GKTIL
Sbjct: 1   MNELYSFITAINERNPEINS-------------LPICITMQRPSPANSSKTENNVGKTIL 60

Query: 72  SLTFQAILASFISSPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRIALLLEKFGAL 131
            LTFQA+LA FI+SP S PPL T LF AA+L+SFAVSFAG+ L N FPRIALL EK GAL
Sbjct: 61  GLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGAL 120

Query: 132 LAAIGICIVPSLLVHP--TWICWLALGSILLPFLIS 163
           +AAIG+CIV SLL+H    WI WLA G  L+ F++S
Sbjct: 121 IAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLS 143

BLAST of Lag0029529 vs. NCBI nr
Match: KAA0050244.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98162.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])

HSP 1 Score: 154.8 bits (390), Expect = 8.8e-34
Identity = 94/165 (56.97%), Postives = 112/165 (67.88%), Query Frame = 0

Query: 1   MAST-PNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNS 60
           MA T P+E SLDMN   SFITA+  RNPGISS  WG   +  S+ LPIYIKM+RPSP NS
Sbjct: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWG---TAASDCLPIYIKMQRPSPVNS 60

Query: 61  PLNLGKTILSLTFQAILASFISSPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRIA 120
           P   G T +S  FQAIL  F++ P SPPPL  ++ T  ML +F  SF G+ L   FP+IA
Sbjct: 61  P-QFGNTFVSSNFQAILGLFLNLPPSPPPLSELIGT-VMLTAFVFSFCGVLLQKPFPKIA 120

Query: 121 LLLEKFGALLAAIGICIVPSLLVHP--TWICWLALGSILLPFLIS 163
            LL+ FGALLAAIG+CI+ S L+HP  TWI WLA G IL  F+ S
Sbjct: 121 HLLQMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITS 160

BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 0

Query: 1   MASTPNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNSP 60
           MASTP +TS+DMNA +SFITAINERN GISS  WG GTSTPS+ LPI I+M+RP P  S 
Sbjct: 1   MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60

Query: 61  LNLGKTILSLTFQAILASFISSPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRIAL 120
            +LGKTIL LTFQA+LA FIS P+SPP LPT+LF AA+L+SFAVSFAGL L  A+PR+AL
Sbjct: 61  QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMAL 120

Query: 121 LLEK 125
           L EK
Sbjct: 121 LFEK 124

BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 4.5e-36
Identity = 97/166 (58.43%), Postives = 114/166 (68.67%), Query Frame = 0

Query: 1   MAST-PNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNS 60
           MA T P+E SLDMN  NS I A+  RNPGISS  WG      S+ LPIYIKM+RPSP NS
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWG---GAASDCLPIYIKMQRPSPVNS 60

Query: 61  PLNLGKTILSLTFQAILASFIS-SPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRI 120
           P   G T LSLTFQAI+  F+S +P+S  PLP+ LF A ML SF  S+ G+ L   FP+ 
Sbjct: 61  P-QFGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKT 120

Query: 121 ALLLEKFGALLAAIGICIVPSLLVHP--TWICWLALGSILLPFLIS 163
           A LL+ FGAL AAIG CI+ SLL++P  TWICWLA G IL  F+IS
Sbjct: 121 AQLLQTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIIS 162

BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 6.6e-35
Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 0

Query: 12  MNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNSPL---NLGKTIL 71
           MN   SFITAINERNP I+S             LPI I M+RPSP NS     N+GKTIL
Sbjct: 1   MNELYSFITAINERNPEINS-------------LPICITMQRPSPANSSKTENNVGKTIL 60

Query: 72  SLTFQAILASFISSPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRIALLLEKFGAL 131
            LTFQA+LA FI+SP S PPL T LF AA+L+SFAVSFAG+ L N FPRIALL EK GAL
Sbjct: 61  GLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGAL 120

Query: 132 LAAIGICIVPSLLVHP--TWICWLALGSILLPFLIS 163
           +AAIG+CIV SLL+H    WI WLA G  L+ F++S
Sbjct: 121 IAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLS 143

BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.2e-34
Identity = 94/165 (56.97%), Postives = 112/165 (67.88%), Query Frame = 0

Query: 1   MAST-PNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNS 60
           MA T P+E SLDMN   SFITA+  RNPGISS  WG   +  S+ LPIYIKM+RPSP NS
Sbjct: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWG---TAASDCLPIYIKMQRPSPVNS 60

Query: 61  PLNLGKTILSLTFQAILASFISSPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRIA 120
           P   G T +S  FQAIL  F++ P SPPPL  ++ T  ML +F  SF G+ L   FP+IA
Sbjct: 61  P-QFGNTFVSSNFQAILGLFLNLPPSPPPLSELIGT-VMLTAFVFSFCGVLLQKPFPKIA 120

Query: 121 LLLEKFGALLAAIGICIVPSLLVHP--TWICWLALGSILLPFLIS 163
            LL+ FGALLAAIG+CI+ S L+HP  TWI WLA G IL  F+ S
Sbjct: 121 HLLQMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITS 160

BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.8e-32
Identity = 92/167 (55.09%), Postives = 111/167 (66.47%), Query Frame = 0

Query: 1   MASTPNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNSP 60
           M S+  + S+DMN   S IT+INERNP I+             GLPI I M+  SP NS 
Sbjct: 1   MESSSQQISIDMNHLYSLITSINERNPEIN-------------GLPICIIMQTASPANSS 60

Query: 61  L---NLGKTILSLTFQAILASFISSPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPR 120
               N+G TIL LTFQA+LA FI+S TS PPL T LF AA+L+SFAVSF G+ L + FPR
Sbjct: 61  KTENNVGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPR 120

Query: 121 IALLLEKFGALLAAIGICIVPSLLVHP--TWICWLALGSILLPFLIS 163
           IALL EK GAL+AAIG+CI+ SLL+H    WI WLA G  L+ FL+S
Sbjct: 121 IALLFEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLS 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6601930.11.5e-3851.74hypothetical protein SDJN03_07163, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022146444.12.2e-3770.97uncharacterized protein LOC111015658 [Momordica charantia][more]
KGN49806.19.4e-3658.43hypothetical protein Csa_004683 [Cucumis sativus][more]
KAA0050246.11.4e-3460.90putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... [more]
KAA0050244.18.8e-3456.97putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CY581.1e-3770.97uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A0A0KQ034.5e-3658.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1[more]
A0A5A7U7U16.6e-3560.90Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3BEH84.2e-3456.97Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
A0A0A0KJN86.8e-3255.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0029529.1Lag0029529.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane