Lag0029529 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCAACTCCAAACGAAACCTCCCTGGATATGAATGCATTCAATTCCTTCATCACTGCAATCAATGAAAGAAACCCTGGAATCAGCAGTCTTATATGGGGATGGGGAACATCCACGCCATCAGAAGGCTTGCCAATTTACATCAAAATGGAGAGGCCTTCACCACCCAACAGCCCTCTGAATCTTGGGAAGACAATTCTCAGTCTTACTTTTCAGGCAATTTTAGCCTCGTTCATCAGTTCGCCCACTTCACCTCCACCACTTCCCACAATTCTCTTTACGGCTGCTATGTTGATGAGCTTTGCAGTTTCATTTGCTGGACTTAACCTTCCGAATGCATTCCCAAGAATCGCACTTTTGTTGGAAAAGTTCGGTGCTCTTTTGGCTGCAATTGGTATCTGCATAGTACCAAGTCTTCTAGTTCATCCAACTTGGATCTGCTGGCTGGCACTTGGCTCCATCTTGCTACCCTTTTTAATATCATTAAAGTGATTTTGACGGAAAAGCATCCCAATGTCCGATGAGGACAGAAGGAGCATTTCTATAGAATCCATGCCCAGTTGGTTGACCTCTTTTACAGTTTGTCTCTGGTTCTTGACCCGGTGTGTTTCATCACCAAGACAAAATCAGCTCCAATTTCCTGAAAATCATGTTATTATACAACTTACAATGACATGATAACTCTGCCTGTGTCATGCTTTAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGAGCACAGTTTGCAGTATTTTAATCTAAGTCGTAATAAAGATGGCAGCATCAAGAAAGATGGGCTCTCTCTATGGTGCATAGAGAGGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAA ATGGCATCAACTCCAAACGAAACCTCCCTGGATATGAATGCATTCAATTCCTTCATCACTGCAATCAATGAAAGAAACCCTGGAATCAGCAGTCTTATATGGGGATGGGGAACATCCACGCCATCAGAAGGCTTGCCAATTTACATCAAAATGGAGAGGCCTTCACCACCCAACAGCCCTCTGAATCTTGGGAAGACAATTCTCAGTCTTACTTTTCAGGCAATTTTAGCCTCGTTCATCAGTTCGCCCACTTCACCTCCACCACTTCCCACAATTCTCTTTACGGCTGCTATGTTGATGAGCTTTGCAGTTTCATTTGCTGGACTTAACCTTCCGAATGCATTCCCAAGAATCGCACTTTTGTTGGAAAAGTTCGGTGCTCTTTTGGCTGCAATTGGTATCTGCATAGTACCAAGTCTTCTAGTTCATCCAACTTGGATCTGCTGGCTGGCACTTGGCTCCATCTTGCTACCCTTTTTAATATCATTAAACCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGAGCACAGTTTGCAGTATTTTAATCTAAGTCGTAATAAAGATGGCAGCATCAAGAAAGATGGGCTCTCTCTATGGTGCATAGAGAGGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAA ATGGCATCAACTCCAAACGAAACCTCCCTGGATATGAATGCATTCAATTCCTTCATCACTGCAATCAATGAAAGAAACCCTGGAATCAGCAGTCTTATATGGGGATGGGGAACATCCACGCCATCAGAAGGCTTGCCAATTTACATCAAAATGGAGAGGCCTTCACCACCCAACAGCCCTCTGAATCTTGGGAAGACAATTCTCAGTCTTACTTTTCAGGCAATTTTAGCCTCGTTCATCAGTTCGCCCACTTCACCTCCACCACTTCCCACAATTCTCTTTACGGCTGCTATGTTGATGAGCTTTGCAGTTTCATTTGCTGGACTTAACCTTCCGAATGCATTCCCAAGAATCGCACTTTTGTTGGAAAAGTTCGGTGCTCTTTTGGCTGCAATTGGTATCTGCATAGTACCAAGTCTTCTAGTTCATCCAACTTGGATCTGCTGGCTGGCACTTGGCTCCATCTTGCTACCCTTTTTAATATCATTAAACCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGAGCACAGTTTGCAGTATTTTAATCTAAGTCGTAATAAAGATGGCAGCATCAAGAAAGATGGGCTCTCTCTATGGTGCATAGAGAGGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAA MASTPNETSLDMNAFNSFITAINERNPGISSLIWGWGTSTPSEGLPIYIKMERPSPPNSPLNLGKTILSLTFQAILASFISSPTSPPPLPTILFTAAMLMSFAVSFAGLNLPNAFPRIALLLEKFGALLAAIGICIVPSLLVHPTWICWLALGSILLPFLISLNRSQARTKEEGSVIRPLDLELVLKDREHSLQYFNLSRNKDGSIKKDGLSLWCIERNHILLKLSHPKI Homology
BLAST of Lag0029529 vs. NCBI nr
Match: KAG6601930.1 (hypothetical protein SDJN03_07163, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 170.6 bits (431), Expect = 1.5e-38 Identity = 119/230 (51.74%), Postives = 132/230 (57.39%), Query Frame = 0
BLAST of Lag0029529 vs. NCBI nr
Match: XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia]) HSP 1 Score: 166.8 bits (421), Expect = 2.2e-37 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Lag0029529 vs. NCBI nr
Match: KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus]) HSP 1 Score: 161.4 bits (407), Expect = 9.4e-36 Identity = 97/166 (58.43%), Postives = 114/166 (68.67%), Query Frame = 0
BLAST of Lag0029529 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]) HSP 1 Score: 157.5 bits (397), Expect = 1.4e-34 Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 0
BLAST of Lag0029529 vs. NCBI nr
Match: KAA0050244.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98162.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]) HSP 1 Score: 154.8 bits (390), Expect = 8.8e-34 Identity = 94/165 (56.97%), Postives = 112/165 (67.88%), Query Frame = 0
BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 4.5e-36 Identity = 97/166 (58.43%), Postives = 114/166 (68.67%), Query Frame = 0
BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 6.6e-35 Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 0
BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 4.2e-34 Identity = 94/165 (56.97%), Postives = 112/165 (67.88%), Query Frame = 0
BLAST of Lag0029529 vs. ExPASy TrEMBL
Match: A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 6.8e-32 Identity = 92/167 (55.09%), Postives = 111/167 (66.47%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|