Lag0029473 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0029473
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionprotein EARLY RESPONSIVE TO DEHYDRATION 15-like
Locationchr8: 39339246 .. 39339969 (-)
RNA-Seq ExpressionLag0029473
SyntenyLag0029473
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTATTGACTGGAAGAAGTTTTTCATTGAACCCCAATGCTCCAATCTTCATTCCTTTTGCTCTTCGTAACGTCGAGGATTTCTCTCCCGAATGGTGGGAACTAATCAAGACATCACCATGGTTCCGTGATTATTGGCTAAGCCAACATCAGGAAGACGATTTCGACAGCATTACCGACGATCTAGTCACTACAGAAGAGTTCCTTGACCCGGAAGAAGCTGAGATTGAAGCTATGATTCTATCAGCTGAAGCAGATGAAAAGCCTGAAGTCAAACCAACGGCTCATAGGAAACCTATGCCTTTGAGTTTATTTGCGCACGAGACCTTGAACCCTTCATCTCGGAAGTTGAAAGCTGCAAGAAATGAAATGTATGCCAAGAAAGTATTGGAGGATCTAGTCATTCCAAAATCTCCAAAGAAAAAAGGTCCAAAGTCCCCAGTTGGTCCTACAAAGTACAATGAGAAGCCAGCCAAGTGCATGAGCCCGAAACACGCTCCAAGGTTCATTCACCAGCCTCGTTGAAAGAGAGGTGCAAACTGGATATCAGATTGCAATTGCAGCAAGCACATGGAACGAGTAAAATTGTCGCCTCACGGTTCGTGTAAGTTACAATAAATGATGAGTTTTCTTGCATATTAGGAGTCATTCACCAGCCTCGTTGGAAGTGATGCAAACTGGATATCAGATTGCAGCTGCATTGAGCGCACGGAATGCGTAG

mRNA sequence

ATGACATTATTGACTGGAAGAAGTTTTTCATTGAACCCCAATGCTCCAATCTTCATTCCTTTTGCTCTTCGTAACGTCGAGGATTTCTCTCCCGAATGGTGGGAACTAATCAAGACATCACCATGGTTCCGTGATTATTGGCTAAGCCAACATCAGGAAGACGATTTCGACAGCATTACCGACGATCTAGTCACTACAGAAGAGTTCCTTGACCCGGAAGAAGCTGAGATTGAAGCTATGATTCTATCAGCTGAAGCAGATGAAAAGCCTGAAGTCAAACCAACGGCTCATAGGAAACCTATGCCTTTGAGTTTATTTGCGCACGAGACCTTGAACCCTTCATCTCGGAAGTTGAAAGCTGCAAGAAATGAAATGTATGCCAAGAAAGTATTGGAGGATCTAGTCATTCCAAAATCTCCAAAGAAAAAAGGTCCAAAGTCCCCAGTTGGTCCTACAAAGTACAATGAGAAGCCAGCCAAGTGCATGAGCCCGAAACACGCTCCAAGGAGTCATTCACCAGCCTCGTTGGAAGTGATGCAAACTGGATATCAGATTGCAGCTGCATTGAGCGCACGGAATGCGTAG

Coding sequence (CDS)

ATGACATTATTGACTGGAAGAAGTTTTTCATTGAACCCCAATGCTCCAATCTTCATTCCTTTTGCTCTTCGTAACGTCGAGGATTTCTCTCCCGAATGGTGGGAACTAATCAAGACATCACCATGGTTCCGTGATTATTGGCTAAGCCAACATCAGGAAGACGATTTCGACAGCATTACCGACGATCTAGTCACTACAGAAGAGTTCCTTGACCCGGAAGAAGCTGAGATTGAAGCTATGATTCTATCAGCTGAAGCAGATGAAAAGCCTGAAGTCAAACCAACGGCTCATAGGAAACCTATGCCTTTGAGTTTATTTGCGCACGAGACCTTGAACCCTTCATCTCGGAAGTTGAAAGCTGCAAGAAATGAAATGTATGCCAAGAAAGTATTGGAGGATCTAGTCATTCCAAAATCTCCAAAGAAAAAAGGTCCAAAGTCCCCAGTTGGTCCTACAAAGTACAATGAGAAGCCAGCCAAGTGCATGAGCCCGAAACACGCTCCAAGGAGTCATTCACCAGCCTCGTTGGAAGTGATGCAAACTGGATATCAGATTGCAGCTGCATTGAGCGCACGGAATGCGTAG

Protein sequence

MTLLTGRSFSLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWLSQHQEDDFDSITDDLVTTEEFLDPEEAEIEAMILSAEADEKPEVKPTAHRKPMPLSLFAHETLNPSSRKLKAARNEMYAKKVLEDLVIPKSPKKKGPKSPVGPTKYNEKPAKCMSPKHAPRSHSPASLEVMQTGYQIAAALSARNA
Homology
BLAST of Lag0029473 vs. NCBI nr
Match: KAG7032640.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.8 bits (634), Expect = 3.8e-62
Identity = 125/174 (71.84%), Postives = 139/174 (79.89%), Query Frame = 0

Query: 1   MTLLTGRSFSLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWLSQHQEDDFDSIT 60
           MTLL+GRSFSLNPNAPIF+PFA RNVEDFSPEWWEL+KTSPWFRDYWLSQHQEDDFDS++
Sbjct: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60

Query: 61  DDLVTTEEFLDPEEAEIEAMILSAEADEKPEVKPTAHRKPMPLSLFAHETLNPSSRKLKA 120
           D++VTTEEFLD EE E EAM+LS EAD+KPEVKPTAH+                   +K 
Sbjct: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHK-----------------NHIKV 120

Query: 121 ARNEMYAKKVLEDLVIPKSPKKKGPKSPVGPTKYNEKPAKCMSPKHAPR-SHSP 174
           A NEM AKKVLEDL+I  SPKK GPKSPV P K+NEKPAKC+SPKHAPR  H P
Sbjct: 121 ASNEMSAKKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQP 157

BLAST of Lag0029473 vs. NCBI nr
Match: XP_023525761.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo] >XP_023525772.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.4 bits (633), Expect = 4.9e-62
Identity = 125/174 (71.84%), Postives = 139/174 (79.89%), Query Frame = 0

Query: 1   MTLLTGRSFSLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWLSQHQEDDFDSIT 60
           MTLL+GRSFSLNPNAPIF+PFA RNVEDFSPEWWEL+KTSPWFRDYWLSQHQEDDFDS++
Sbjct: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60

Query: 61  DDLVTTEEFLDPEEAEIEAMILSAEADEKPEVKPTAHRKPMPLSLFAHETLNPSSRKLKA 120
           D++V TEEFLD EE E EAM+LS EAD+KPEVKPTAH+                   +KA
Sbjct: 61  DEIVATEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHK-----------------NHIKA 120

Query: 121 ARNEMYAKKVLEDLVIPKSPKKKGPKSPVGPTKYNEKPAKCMSPKHAPR-SHSP 174
           A NEM AKKVLEDL+I  SPKK GPKSPV P K+NEKPAKC+SPKHAPR  H P
Sbjct: 121 ASNEMSAKKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQP 157

BLAST of Lag0029473 vs. NCBI nr
Match: XP_022963214.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata] >XP_022963222.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-61
Identity = 124/174 (71.26%), Postives = 138/174 (79.31%), Query Frame = 0

Query: 1   MTLLTGRSFSLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWLSQHQEDDFDSIT 60
           MTLL+GRSFSLNPNAPIF+PFA RNVEDFSPEWWEL+KTSPWFRDYWLSQHQEDDFDS++
Sbjct: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFRDYWLSQHQEDDFDSVS 60

Query: 61  DDLVTTEEFLDPEEAEIEAMILSAEADEKPEVKPTAHRKPMPLSLFAHETLNPSSRKLKA 120
           D++V TEEFLD EE E EAM+L  EAD+KPEVKPTAH+                   +KA
Sbjct: 61  DEIVATEEFLDLEEMEFEAMVLPNEADQKPEVKPTAHK-----------------NHIKA 120

Query: 121 ARNEMYAKKVLEDLVIPKSPKKKGPKSPVGPTKYNEKPAKCMSPKHAPR-SHSP 174
           A NEM AKKVLEDL+I  SPKK GPKSPV P K+NEKPAKC+SPKHAPR  H P
Sbjct: 121 ASNEMSAKKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQP 157

BLAST of Lag0029473 vs. NCBI nr
Match: KAG6601946.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-60
Identity = 123/174 (70.69%), Postives = 138/174 (79.31%), Query Frame = 0

Query: 1   MTLLTGRSFSLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWLSQHQEDDFDSIT 60
           MTLL+GRSFSLNPNAPIF+PFA RNVEDFSPEWWEL+KTSPWF DYWLSQHQEDDFDS++
Sbjct: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSPWFWDYWLSQHQEDDFDSVS 60

Query: 61  DDLVTTEEFLDPEEAEIEAMILSAEADEKPEVKPTAHRKPMPLSLFAHETLNPSSRKLKA 120
           +++VTTEEFLD EE E EAM+LS EAD+KPEVKPTAH+                   +K 
Sbjct: 61  NEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHK-----------------NHIKV 120

Query: 121 ARNEMYAKKVLEDLVIPKSPKKKGPKSPVGPTKYNEKPAKCMSPKHAPR-SHSP 174
           A NEM AKKVLEDL+I  SPKK GPKSPV P K+NEKPAKC+SPKHAPR  H P
Sbjct: 121 ASNEMSAKKVLEDLIIQNSPKKNGPKSPVSPAKFNEKPAKCVSPKHAPRFIHQP 157

BLAST of Lag0029473 vs. NCBI nr
Match: XP_022990671.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima] >XP_022990672.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima])

HSP 1 Score: 240.0 bits (611), Expect = 1.7e-59
Identity = 122/174 (70.11%), Postives = 137/174 (78.74%), Query Frame = 0

Query: 1   MTLLTGRSFSLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWLSQHQEDDFDSIT 60
           MTLL+GRSFSLNPNAPIF+PFA RNVEDFSPEWWEL+KTS WF+DYWLSQHQEDDFDS++
Sbjct: 1   MTLLSGRSFSLNPNAPIFVPFAFRNVEDFSPEWWELVKTSLWFQDYWLSQHQEDDFDSVS 60

Query: 61  DDLVTTEEFLDPEEAEIEAMILSAEADEKPEVKPTAHRKPMPLSLFAHETLNPSSRKLKA 120
           D++VTTEEFLD EE E EAM+LS EAD+KPEVKPTAH+                   +KA
Sbjct: 61  DEIVTTEEFLDLEEMEFEAMVLSNEADQKPEVKPTAHK-----------------NHIKA 120

Query: 121 ARNEMYAKKVLEDLVIPKSPKKKGPKSPVGPTKYNEKPAKCMSPKHAPR-SHSP 174
           A NEM AKKVLEDL+I  SPKK GPKSP  P K+NEKPAKC+ PKHAPR  H P
Sbjct: 121 ASNEMSAKKVLEDLIIQNSPKKNGPKSPGNPAKFNEKPAKCVIPKHAPRFIHQP 157

BLAST of Lag0029473 vs. ExPASy Swiss-Prot
Match: Q94AR4 (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-14
Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 0

Query: 7  RSFSLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWLSQHQEDDFDSITDDLVTT 66
          R  +LNPNAP+F P   R VEDFSP+WW+L+ TS WFRD+WLS + E++F    D  V  
Sbjct: 8  RLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDFSVME 67

Query: 67 EEF 70
          EEF
Sbjct: 68 EEF 70

BLAST of Lag0029473 vs. ExPASy Swiss-Prot
Match: Q39096 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 64/176 (36.36%), Postives = 88/176 (50.00%), Query Frame = 0

Query: 1   MTLLTGRSFSLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWLSQHQEDDFDSIT 60
           M +++GR  +LNP+AP+FIP A+R VEDFSPEWW+L+ TS W+ DYW+SQ Q+       
Sbjct: 1   MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQG------ 60

Query: 61  DDLVTTEEFLDPEEAEIEAMILSAEADEKPEVKPTAHRKPMPLSLFAHETLNPSSRKLKA 120
                 + F D  E E     +   AD  PE       +    +  A        R    
Sbjct: 61  -----ADGFYDNGENENGGGHIDV-ADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQ 120

Query: 121 ARNEMYAKKVLEDLVIPKSPKKKGPKSPVGPTKYNEKPAKCMSPK--HAPRS-HSP 174
           A +E    K  E  ++ KS   + P+S V P KY EKPAK  + +   APR+ H P
Sbjct: 121 APSEFGFGKNGE--MVKKSSGNRSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQP 162

BLAST of Lag0029473 vs. ExPASy Swiss-Prot
Match: I1JIC4 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 35/65 (53.85%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 10 SLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWL------SQHQEDDFDSITDDL 69
          SLNPNAP+F+P A R VEDFS +WW L+ +SPWFRDYWL       Q Q DD      DL
Sbjct: 8  SLNPNAPMFVPLAYRTVEDFSDQWWNLVHSSPWFRDYWLRECFQDPQFQNDDAFDFDFDL 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7032640.13.8e-6271.84Protein EARLY RESPONSIVE TO DEHYDRATION 15 [Cucurbita argyrosperma subsp. argyro... [more]
XP_023525761.14.9e-6271.84protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022963214.11.9e-6171.26protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata] >XP_0229632... [more]
KAG6601946.11.2e-6070.69Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subs... [more]
XP_022990671.11.7e-5970.11protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima] >XP_022990672... [more]
Match NameE-valueIdentityDescription
Q94AR45.2e-1455.56Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3... [more]
Q390961.2e-1336.36Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
I1JIC41.3e-1253.85Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 ... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..173
NoneNo IPR availablePANTHERPTHR33790:SF10PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15coord: 1..170
IPR040414PAM2-containing protein CID1/CID2PANTHERPTHR33790OS05G0344200 PROTEINcoord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0029473.1Lag0029473.1mRNA