Lag0029473 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATTATTGACTGGAAGAAGTTTTTCATTGAACCCCAATGCTCCAATCTTCATTCCTTTTGCTCTTCGTAACGTCGAGGATTTCTCTCCCGAATGGTGGGAACTAATCAAGACATCACCATGGTTCCGTGATTATTGGCTAAGCCAACATCAGGAAGACGATTTCGACAGCATTACCGACGATCTAGTCACTACAGAAGAGTTCCTTGACCCGGAAGAAGCTGAGATTGAAGCTATGATTCTATCAGCTGAAGCAGATGAAAAGCCTGAAGTCAAACCAACGGCTCATAGGAAACCTATGCCTTTGAGTTTATTTGCGCACGAGACCTTGAACCCTTCATCTCGGAAGTTGAAAGCTGCAAGAAATGAAATGTATGCCAAGAAAGTATTGGAGGATCTAGTCATTCCAAAATCTCCAAAGAAAAAAGGTCCAAAGTCCCCAGTTGGTCCTACAAAGTACAATGAGAAGCCAGCCAAGTGCATGAGCCCGAAACACGCTCCAAGGTTCATTCACCAGCCTCGTTGAAAGAGAGGTGCAAACTGGATATCAGATTGCAATTGCAGCAAGCACATGGAACGAGTAAAATTGTCGCCTCACGGTTCGTGTAAGTTACAATAAATGATGAGTTTTCTTGCATATTAGGAGTCATTCACCAGCCTCGTTGGAAGTGATGCAAACTGGATATCAGATTGCAGCTGCATTGAGCGCACGGAATGCGTAG ATGACATTATTGACTGGAAGAAGTTTTTCATTGAACCCCAATGCTCCAATCTTCATTCCTTTTGCTCTTCGTAACGTCGAGGATTTCTCTCCCGAATGGTGGGAACTAATCAAGACATCACCATGGTTCCGTGATTATTGGCTAAGCCAACATCAGGAAGACGATTTCGACAGCATTACCGACGATCTAGTCACTACAGAAGAGTTCCTTGACCCGGAAGAAGCTGAGATTGAAGCTATGATTCTATCAGCTGAAGCAGATGAAAAGCCTGAAGTCAAACCAACGGCTCATAGGAAACCTATGCCTTTGAGTTTATTTGCGCACGAGACCTTGAACCCTTCATCTCGGAAGTTGAAAGCTGCAAGAAATGAAATGTATGCCAAGAAAGTATTGGAGGATCTAGTCATTCCAAAATCTCCAAAGAAAAAAGGTCCAAAGTCCCCAGTTGGTCCTACAAAGTACAATGAGAAGCCAGCCAAGTGCATGAGCCCGAAACACGCTCCAAGGAGTCATTCACCAGCCTCGTTGGAAGTGATGCAAACTGGATATCAGATTGCAGCTGCATTGAGCGCACGGAATGCGTAG ATGACATTATTGACTGGAAGAAGTTTTTCATTGAACCCCAATGCTCCAATCTTCATTCCTTTTGCTCTTCGTAACGTCGAGGATTTCTCTCCCGAATGGTGGGAACTAATCAAGACATCACCATGGTTCCGTGATTATTGGCTAAGCCAACATCAGGAAGACGATTTCGACAGCATTACCGACGATCTAGTCACTACAGAAGAGTTCCTTGACCCGGAAGAAGCTGAGATTGAAGCTATGATTCTATCAGCTGAAGCAGATGAAAAGCCTGAAGTCAAACCAACGGCTCATAGGAAACCTATGCCTTTGAGTTTATTTGCGCACGAGACCTTGAACCCTTCATCTCGGAAGTTGAAAGCTGCAAGAAATGAAATGTATGCCAAGAAAGTATTGGAGGATCTAGTCATTCCAAAATCTCCAAAGAAAAAAGGTCCAAAGTCCCCAGTTGGTCCTACAAAGTACAATGAGAAGCCAGCCAAGTGCATGAGCCCGAAACACGCTCCAAGGAGTCATTCACCAGCCTCGTTGGAAGTGATGCAAACTGGATATCAGATTGCAGCTGCATTGAGCGCACGGAATGCGTAG MTLLTGRSFSLNPNAPIFIPFALRNVEDFSPEWWELIKTSPWFRDYWLSQHQEDDFDSITDDLVTTEEFLDPEEAEIEAMILSAEADEKPEVKPTAHRKPMPLSLFAHETLNPSSRKLKAARNEMYAKKVLEDLVIPKSPKKKGPKSPVGPTKYNEKPAKCMSPKHAPRSHSPASLEVMQTGYQIAAALSARNA Homology
BLAST of Lag0029473 vs. NCBI nr
Match: KAG7032640.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 248.8 bits (634), Expect = 3.8e-62 Identity = 125/174 (71.84%), Postives = 139/174 (79.89%), Query Frame = 0
BLAST of Lag0029473 vs. NCBI nr
Match: XP_023525761.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo] >XP_023525772.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 248.4 bits (633), Expect = 4.9e-62 Identity = 125/174 (71.84%), Postives = 139/174 (79.89%), Query Frame = 0
BLAST of Lag0029473 vs. NCBI nr
Match: XP_022963214.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata] >XP_022963222.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata]) HSP 1 Score: 246.5 bits (628), Expect = 1.9e-61 Identity = 124/174 (71.26%), Postives = 138/174 (79.31%), Query Frame = 0
BLAST of Lag0029473 vs. NCBI nr
Match: KAG6601946.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 243.8 bits (621), Expect = 1.2e-60 Identity = 123/174 (70.69%), Postives = 138/174 (79.31%), Query Frame = 0
BLAST of Lag0029473 vs. NCBI nr
Match: XP_022990671.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima] >XP_022990672.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]) HSP 1 Score: 240.0 bits (611), Expect = 1.7e-59 Identity = 122/174 (70.11%), Postives = 137/174 (78.74%), Query Frame = 0
BLAST of Lag0029473 vs. ExPASy Swiss-Prot
Match: Q94AR4 (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.2e-14 Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Lag0029473 vs. ExPASy Swiss-Prot
Match: Q39096 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13 Identity = 64/176 (36.36%), Postives = 88/176 (50.00%), Query Frame = 0
BLAST of Lag0029473 vs. ExPASy Swiss-Prot
Match: I1JIC4 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12 Identity = 35/65 (53.85%), Postives = 41/65 (63.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|