Lag0029453 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029453
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein SENSITIVITY TO RED LIGHT REDUCED 1
Location	chr8: 39140484 .. 39141317 (+)
RNA-Seq Expression	Lag0029453
Synteny	Lag0029453

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCGTCTGCAAAAACTCTCGCTATTCCGGATCAGTCGAATAATGGCGACTGGACGGTTGTTTTACCTCGTCGTGGCAGGCAGAGGAAAATTTTTCCGAAGCTCAAAAAACTAGAAAATCAGCGGACTTGGTCTCCCACTGATCAGACCAACGATACAATCAGGGAATCGAAACTGTTGCAGAAGATGGAAATCTGTATTAAGAAAGTTGAGAGCTCCCAATTTTATCAAACTCTCGTTGATGAGCTTGGAACGATGCCGGTCTTGGAATCCTTGAATAGGGTTTTGGCCTTGGAGTCAAAGATGGGGATGGTTATCTATGGCGTGGGAAGCATTGAGAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCAATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGTTTAGAGGTGTTCGATCCAATTCTTTCTGCAACCGAATGTCGGGTAATGGAGTCCTTCGGTTGTTCTGTTCTATCAGTAAACGAGCAAGGAAGGCGATGTGCACAGAAGCCAACAATGTTTTTTATGCCCCATTGCGAGGCAGAGTTGTACAATAATCTTTTACAGGAAAATTGGACAGTGGAGCTATTGAATCGTGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTATCTGAATTCAAAAACTCACCCGTTGTTGATTCGGCGAAGTACATCTTGGCCTCTAGAAAGTTCACACGCGAGATCAAAATCAAGACACTTTCAGATGATTATTTTGGTGCTTTCCATGATTCAAGTTGGCATTTTTTCAGCCCTGTTTTACCGACAGAGCTGCAATTCACAGATCTTTAA

mRNA sequence

ATGGCAGCGTCTGCAAAAACTCTCGCTATTCCGGATCAGTCGAATAATGGCGACTGGACGGTTGTTTTACCTCGTCGTGGCAGGCAGAGGAAAATTTTTCCGAAGCTCAAAAAACTAGAAAATCAGCGGACTTGGTCTCCCACTGATCAGACCAACGATACAATCAGGGAATCGAAACTGTTGCAGAAGATGGAAATCTGTATTAAGAAAGTTGAGAGCTCCCAATTTTATCAAACTCTCGTTGATGAGCTTGGAACGATGCCGGTCTTGGAATCCTTGAATAGGGTTTTGGCCTTGGAGTCAAAGATGGGGATGGTTATCTATGGCGTGGGAAGCATTGAGAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCAATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGTTTAGAGGTGTTCGATCCAATTCTTTCTGCAACCGAATGTCGGGTAATGGAGTCCTTCGGTTGTTCTGTTCTATCAGTAAACGAGCAAGGAAGGCGATGTGCACAGAAGCCAACAATGTTTTTTATGCCCCATTGCGAGGCAGAGTTGTACAATAATCTTTTACAGGAAAATTGGACAGTGGAGCTATTGAATCGTGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTATCTGAATTCAAAAACTCACCCGTTGTTGATTCGGCGAAGTACATCTTGGCCTCTAGAAAGTTCACACGCGAGATCAAAATCAAGACACTTTCAGATGATTATTTTGGTGCTTTCCATGATTCAAGTTGGCATTTTTTCAGCCCTGTTTTACCGACAGAGCTGCAATTCACAGATCTTTAA

Coding sequence (CDS)

ATGGCAGCGTCTGCAAAAACTCTCGCTATTCCGGATCAGTCGAATAATGGCGACTGGACGGTTGTTTTACCTCGTCGTGGCAGGCAGAGGAAAATTTTTCCGAAGCTCAAAAAACTAGAAAATCAGCGGACTTGGTCTCCCACTGATCAGACCAACGATACAATCAGGGAATCGAAACTGTTGCAGAAGATGGAAATCTGTATTAAGAAAGTTGAGAGCTCCCAATTTTATCAAACTCTCGTTGATGAGCTTGGAACGATGCCGGTCTTGGAATCCTTGAATAGGGTTTTGGCCTTGGAGTCAAAGATGGGGATGGTTATCTATGGCGTGGGAAGCATTGAGAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCAATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGTTTAGAGGTGTTCGATCCAATTCTTTCTGCAACCGAATGTCGGGTAATGGAGTCCTTCGGTTGTTCTGTTCTATCAGTAAACGAGCAAGGAAGGCGATGTGCACAGAAGCCAACAATGTTTTTTATGCCCCATTGCGAGGCAGAGTTGTACAATAATCTTTTACAGGAAAATTGGACAGTGGAGCTATTGAATCGTGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTATCTGAATTCAAAAACTCACCCGTTGTTGATTCGGCGAAGTACATCTTGGCCTCTAGAAAGTTCACACGCGAGATCAAAATCAAGACACTTTCAGATGATTATTTTGGTGCTTTCCATGATTCAAGTTGGCATTTTTTCAGCCCTGTTTTACCGACAGAGCTGCAATTCACAGATCTTTAA

Protein sequence

MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKLLQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPRLQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFMPHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFTREIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL

Homology

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BLAST of Lag0029453 vs. NCBI nr
Match: KAG6579107.1 (Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144
Identity = 258/277 (93.14%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAKTLA+PDQSNNGDWTVVLPRRGRQRK FPKL+  E+QRTWSPTDQ NDTIRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           LQKMEICIKKVESSQFY+TL+DELGT PVLESLNRVLA ESKM MVIYGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNRVLASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSATECRVM SFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMASFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEAELYNNLLQENWTVELLN VVLFGNSFEIYEQFVSEFK+SPVVDSAKYILASRKFT
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           REIKIKTLSDDYFGAFHDSSWHFFSPV PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]

BLAST of Lag0029453 vs. NCBI nr
Match: XP_023550156.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550157.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550158.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550159.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 522.7 bits (1345), Expect = 1.9e-144
Identity = 257/277 (92.78%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAKTLA+PDQSNNGDWTVVLPRRGRQRK FPKL+  E+QRTWSPTDQ NDTIRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           LQKMEICIKKVESSQF++TL+DELGT PVLESLNR LA ESKM MVIYGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFFRTLIDELGTTPVLESLNRALASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEAELYNNLLQENWTVELLN VVLFGNSFEIYEQFVSEFK+SPVVDSAKYILASRKFT
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           REIKIKTLSDDYFGAFHDSSWHFFSPV PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]

BLAST of Lag0029453 vs. NCBI nr
Match: XP_022939448.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939449.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939450.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939451.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939452.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata])

HSP 1 Score: 521.9 bits (1343), Expect = 3.3e-144
Identity = 257/277 (92.78%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAKTLA+PDQSNNGDWTVVLPRRGRQRK FPKL+  E+QRTWSPTDQ ND IRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDAIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           LQKMEICIKKVESSQFY+TL+DELGT PVLESLNRVLA ESKM MVIYGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNRVLASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEAELY+NLLQENWTVELLN VVLFGNSFEIYEQFVSEFK+SPVVDSAKYILASRKFT
Sbjct: 181 PHCEAELYDNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           REIKIKTLSDDYFGAFHDSSWHFFSPV PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]

BLAST of Lag0029453 vs. NCBI nr
Match: XP_038876148.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1 [Benincasa hispida] >XP_038876149.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Benincasa hispida] >XP_038876150.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Benincasa hispida])

HSP 1 Score: 520.8 bits (1340), Expect = 7.3e-144
Identity = 257/277 (92.78%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIF KL   E+QRTWSPTDQ NDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFRKLSNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           LQKMEICIKKVESSQF+QTLV+ELGT PVLESLNRVLA ESKMGMVIYGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFFQTLVEELGTKPVLESLNRVLASESKMGMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQL LAILLKRKFSWIGSLEVFDPILSATECR+MESFGCSV+SVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLGLAILLKRKFSWIGSLEVFDPILSATECRLMESFGCSVISVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEAELYNNLLQENWTVELLN VVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           +EIKIKT+SDDYF AFHDSSWHFFSPV P ELQF+DL
Sbjct: 241 KEIKIKTVSDDYFDAFHDSSWHFFSPVSPMELQFSDL 277

[Close]

BLAST of Lag0029453 vs. NCBI nr
Match: KAG7032652.1 (Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 518.5 bits (1334), Expect = 3.6e-143
Identity = 257/277 (92.78%), Postives = 264/277 (95.31%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAKTLAIPDQSNNGDWTVVLPRRGRQRK  PKL+K E+QRTWSP+DQ NDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           L KMEICIKKVE SQFY+TLV EL TMPVLESLNRVLA ESKMGMV YGVGSIENYENPR
Sbjct: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSA ECRV+ESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEAELYNNLLQENWTVELLN VVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKF+
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           REIKIKTLSD+YFGAFHDSSWHFFSP LPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277

[Close]

BLAST of Lag0029453 vs. ExPASy Swiss-Prot
Match: Q8GWZ6 (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SRR1 PE=2 SV=2)

HSP 1 Score: 285.0 bits (728), Expect = 8.9e-76
Identity = 141/267 (52.81%), Postives = 197/267 (73.78%), Query Frame = 0


Query: 10  IPDQSNNGDWTVVLP---RRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKLLQKMEI 69
           + + S++G+W VVLP   R+GR+RK  PK +  E ++ W   D   D  R+++L QKMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPRLQLSLA 129
            +KK+ESS FY   +++L +  V   +  VL  E+++ MV+YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSATE   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFTREIKI 249
            LY+NLLQ NW ++ L+++ LFGNSF++YE+ VS   ++ V+ + K I+A+++ T E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDDYFGAFHDSSWHFFSPVLPTEL 273
           +T SDDYF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

[Close]

BLAST of Lag0029453 vs. ExPASy Swiss-Prot
Match: Q8K2M3 (SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4)

HSP 1 Score: 100.5 bits (249), Expect = 3.1e-20
Identity = 72/218 (33.03%), Postives = 111/218 (50.92%), Query Frame = 0


Query: 19  WTVVLPRRGRQRKIFPKLKKLENQRTWSPTD---------QTNDTIRE----SKLLQKME 78
           W+ V PRR R+R    + +  E  R     D         +  + +R     S  L+ + 
Sbjct: 9   WSAVAPRR-RKRAAGRRPRPGEGPRAEPEADGEAVLRRLREAEEDLRISDFCSSALETIT 68

Query: 79  ICIKKVESSQFYQTLVDELGTMPVLESL-----NRVLALESKMGMVIYGVGSIENYENPR 138
            C++K    +  Q L + LG + +  SL       + +  S +  V YG+G+  +    R
Sbjct: 69  ECLRK--QLEQLQPLTEALGRLHLGSSLPSASQEPLASSASHVKCVCYGLGTFASCPTAR 128

Query: 139 LQLSLAILLKRKFSWIGS-LEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQ-KPTMF 198
           +QL+  +L   K     S   V+DP+ S TE  V+ S G +VLS NE+G+R  Q +PT+F
Sbjct: 129 IQLAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSENEEGKRSVQGQPTVF 188

Query: 199 FMPHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQ 217
           +MPHC   LYNNLL  NW+ + L+RV++ GNSF   E+
Sbjct: 189 YMPHCGTALYNNLLWSNWSADALSRVLIIGNSFRGLEE 223

[Close]

BLAST of Lag0029453 vs. ExPASy Swiss-Prot
Match: Q9UH36 (SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.5e-19
Identity = 65/177 (36.72%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 106 VIYGVGSIENYENPRLQLSLAILLKRKFSWIGS-LEVFDPILSATECRVMESFGCSVLSV 165
           V YG+G+       R QL+  +LL  K     S   V+DP+ S  E  V+ + G +VLS 
Sbjct: 142 VCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTVLSE 201

Query: 166 NEQGRRCAQ-KPTMFFMPHCEAELYNNLLQENWTVELLNRVVLFGNSFE-IYEQFVSEF- 225
           NE+G+R  + +PT+F+M HC   LYNNLL  NW+V+ L+++V+ GNSF+ + E+ ++   
Sbjct: 202 NEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLLARIL 261

Query: 226 -KNSPVVDSAKYILASRKFTREIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
            KN P      YI    K   E++    S  Y   F+D+S H+F PV   E    D+
Sbjct: 262 QKNYP------YIAKILKGLEELEFPQTS-QYMDIFNDTSVHWF-PVQKLEQLSIDI 310

[Close]

BLAST of Lag0029453 vs. ExPASy Swiss-Prot
Match: Q9VEB5 (SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.1e-08
Identity = 54/202 (26.73%), Postives = 90/202 (44.55%), Query Frame = 0


Query: 14  SNNG-DWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKLLQKME-ICIKKV 73
           SN+G D+ VV  ++   RK    L++ +  ++ S        +   K   ++E +C +  
Sbjct: 2   SNSGEDFQVVTRKKWMARKC---LRRRDRHKSESDYLIDCPDVNVEKFQPRLENLCTEMC 61

Query: 74  ESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPRLQLSLAILLKR 133
           +S  F   LV        LE + + L       +V  G+G      +   Q +  I L R
Sbjct: 62  QSDYF---LVAMEALQQQLEGIRKPLE-----RIVCLGLGPFSRTYHALHQAAFVIGLHR 121

Query: 134 KFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFMPHCEAELYNNL 193
               I     FDP+   +E  ++  F   ++S +  G+  A  PT++++PHC   L +N+
Sbjct: 122 HHK-IREALYFDPVFRDSEKELIRLFDGCIMSKDCAGKHEATVPTLYYLPHCPYALMHNI 181

Query: 194 LQENWTVELLNRVVLFGNSFEI 214
           L  NW  E L  V L  NSFE+
Sbjct: 182 LWSNWKRETLPNVFLISNSFEM 191

[Close]

BLAST of Lag0029453 vs. ExPASy TrEMBL
Match: A0A6J1FGU7 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita moschata OX=3662 GN=LOC111445349 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.6e-144
Identity = 257/277 (92.78%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAKTLA+PDQSNNGDWTVVLPRRGRQRK FPKL+  E+QRTWSPTDQ ND IRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDAIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           LQKMEICIKKVESSQFY+TL+DELGT PVLESLNRVLA ESKM MVIYGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNRVLASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEAELY+NLLQENWTVELLN VVLFGNSFEIYEQFVSEFK+SPVVDSAKYILASRKFT
Sbjct: 181 PHCEAELYDNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           REIKIKTLSDDYFGAFHDSSWHFFSPV PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]

BLAST of Lag0029453 vs. ExPASy TrEMBL
Match: A0A6J1JWJ0 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita maxima OX=3661 GN=LOC111488981 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.2e-141
Identity = 252/277 (90.97%), Postives = 262/277 (94.58%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAK LA+ DQSNNGDWTVVLPRRGRQRK FPKL+  E+QRTWSPTDQ NDTIRESKL
Sbjct: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           LQKMEICIKKVESSQFY+TL+DELGT PVLESLN+ LA ESKM MVIYGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCS+LSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEA LYNNLLQENWTVELLN VVLFGNSFEIY QFVSEFK+SPVVDSAKYILASRKFT
Sbjct: 181 PHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           REIKIKTLSDDYFGAFHDSSWHFFSPV PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]

BLAST of Lag0029453 vs. ExPASy TrEMBL
Match: A0A6J1HK12 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464256 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.0e-138
Identity = 251/277 (90.61%), Postives = 260/277 (93.86%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAKTLAIPDQSNNGDWTVVLPRRGRQRK  PKL+K E+QRTWSP+DQ NDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           L KMEICIKKVESSQFY+TLVDEL  MPVLESLNRVLA ESKMGMV YGVGSIENYENPR
Sbjct: 61  LHKMEICIKKVESSQFYRTLVDELEMMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIG LEVFDPILSA EC+V+ESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGRLEVFDPILSAIECQVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEAELY+NLLQENWTVELLN VVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKF+
Sbjct: 181 PHCEAELYSNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           REIKIKTLSD+YFGA   SSWH FSP LPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGA---SSWHVFSPFLPTELQFTDL 274

[Close]

BLAST of Lag0029453 vs. ExPASy TrEMBL
Match: A0A5A7VEC7 (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00470 PE=3 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.2e-137
Identity = 242/277 (87.36%), Postives = 261/277 (94.22%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAKT+AIPDQSNNGDWTVVLPRRG+QRK FPKL+  E+QRTWSPTDQ NDTIRESKL
Sbjct: 1   MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           LQKME+CIKK+ESSQFY+TLV+EL T+P LESLNRVL  ESKMG+VIYGVGSIENYENPR
Sbjct: 61  LQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSATECR+MESFGCSVLSVNEQGRRCA+KPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEAELYNNLLQENW V+LLN ++LFGNSFEIYEQFVSEFKNSPVVDS+ +ILASRKF 
Sbjct: 181 PHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFV 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           REIKIKT+SDDYFGAFHDSSWHFFSPV P EL+F DL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL 277

[Close]

BLAST of Lag0029453 vs. ExPASy TrEMBL
Match: A0A1S3CQQ4 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo OX=3656 GN=LOC103503243 PE=3 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.2e-137
Identity = 242/277 (87.36%), Postives = 261/277 (94.22%), Query Frame = 0


Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKL 60
           MAASAKT+AIPDQSNNGDWTVVLPRRG+QRK FPKL+  E+QRTWSPTDQ NDTIRESKL
Sbjct: 1   MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPR 120
           LQKME+CIKK+ESSQFY+TLV+EL T+P LESLNRVL  ESKMG+VIYGVGSIENYENPR
Sbjct: 61  LQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSATECR+MESFGCSVLSVNEQGRRCA+KPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFT 240
           PHCEAELYNNLLQENW V+LLN ++LFGNSFEIYEQFVSEFKNSPVVDS+ +ILASRKF 
Sbjct: 181 PHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFV 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVLPTELQFTDL 278
           REIKIKT+SDDYFGAFHDSSWHFFSPV P EL+F DL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL 277

[Close]

BLAST of Lag0029453 vs. TAIR 10
Match: AT5G59560.1 (sensitivity to red light reduced protein (SRR1) )

HSP 1 Score: 285.0 bits (728), Expect = 6.3e-77
Identity = 141/267 (52.81%), Postives = 197/267 (73.78%), Query Frame = 0


Query: 10  IPDQSNNGDWTVVLP---RRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKLLQKMEI 69
           + + S++G+W VVLP   R+GR+RK  PK +  E ++ W   D   D  R+++L QKMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPRLQLSLA 129
            +KK+ESS FY   +++L +  V   +  VL  E+++ MV+YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSATE   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFTREIKI 249
            LY+NLLQ NW ++ L+++ LFGNSF++YE+ VS   ++ V+ + K I+A+++ T E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDDYFGAFHDSSWHFFSPVLPTEL 273
           +T SDDYF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

[Close]

BLAST of Lag0029453 vs. TAIR 10
Match: AT5G59560.2 (sensitivity to red light reduced protein (SRR1) )

HSP 1 Score: 285.0 bits (728), Expect = 6.3e-77
Identity = 141/267 (52.81%), Postives = 197/267 (73.78%), Query Frame = 0


Query: 10  IPDQSNNGDWTVVLP---RRGRQRKIFPKLKKLENQRTWSPTDQTNDTIRESKLLQKMEI 69
           + + S++G+W VVLP   R+GR+RK  PK +  E ++ W   D   D  R+++L QKMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVESSQFYQTLVDELGTMPVLESLNRVLALESKMGMVIYGVGSIENYENPRLQLSLA 129
            +KK+ESS FY   +++L +  V   +  VL  E+++ MV+YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSATECRVMESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSATE   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNRVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFTREIKI 249
            LY+NLLQ NW ++ L+++ LFGNSF++YE+ VS   ++ V+ + K I+A+++ T E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDDYFGAFHDSSWHFFSPVLPTEL 273
           +T SDDYF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

The following BLAST results are available for this feature:

BLAST of Lag0029453 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579107.1	1.1e-144	93.14	Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subs...	[more]
XP_023550156.1	1.9e-144	92.78	protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022939448.1	3.3e-144	92.78	protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939449.1 ...	[more]
XP_038876148.1	7.3e-144	92.78	protein SENSITIVITY TO RED LIGHT REDUCED 1 [Benincasa hispida] >XP_038876149.1 p...	[more]
KAG7032652.1	3.6e-143	92.78	Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Lag0029453 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWZ6	8.9e-76	52.81	Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
Q8K2M3	3.1e-20	33.03	SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4	[more]
Q9UH36	4.5e-19	36.72	SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1	[more]
Q9VEB5	6.1e-08	26.73	SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1	[more]

BLAST of Lag0029453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGU7	1.6e-144	92.78	protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JWJ0	2.2e-141	90.97	protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1HK12	5.0e-138	90.61	protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7VEC7	4.2e-137	87.36	Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CQQ4	4.2e-137	87.36	protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo OX=3656 GN=LOC1035032...	[more]

BLAST of Lag0029453 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59560.1	6.3e-77	52.81	sensitivity to red light reduced protein (SRR1)	[more]
AT5G59560.2	6.3e-77	52.81	sensitivity to red light reduced protein (SRR1)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012942	SRR1-like domain	PFAM	PF07985	SRR1	coord: 105..157 e-value: 1.7E-10 score: 40.8
IPR040044	SRR1-like protein	PANTHER	PTHR28626	SRR1-LIKE PROTEIN	coord: 14..265
None	No IPR available	PANTHER	PTHR28626:SF3	SRR1-LIKE PROTEIN	coord: 14..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029453.1	Lag0029453.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus