Lag0029232 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029232
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	TLC domain-containing protein
Location	chr8: 36750623 .. 36753856 (+)
RNA-Seq Expression	Lag0029232
Synteny	Lag0029232

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAATGGGCCGAACAAACAGCCCAACCTTCGGAATCGCTCGATCCTCAACTCGCAAGCATTATCTGGTTACCGTTTACCGTGAGGACCGGTGCCTCCCCCTCCTCTCTCCGGTCTCTTCCTTTCTGTTGCTGTCCATCGTCGTCGTCATCACCAGCAGATACAGAACGGACGATCGAGCTTCATAGCGAATCCATGGCCGGTAGGACAGCGTTGAAGGAGAAGAGCAGGGCAGGAAGCTTCTTCTCTGCGACATTAGTGCTTTGGACAGTCTCTCTTTGGTTCGAAATTCTGTTCGACCGGCGCTTCGAGCTCCTCTACCTCGTTTTCGGAGCTCTGTTCTACCAATCCGCCAATTGGATCATTCGAGTTCTTGTTTCAAAGGATCCTCTCTTAGTCAACACCTCTGTCTCTCTCCTTCACTCCATTATCACCTCTTCTTCAGGTTCTGTGCTGCTCTTTTACCCTTTCGTTTCTTTTGGTCTCTTTTTTTTATTTTATTTTGATTCTACTTCTCTGTGAGTTATTTTATACCTTGATTTTGTTTTTTTCATTACACGCGACTGCCTTACTGTTTGATTCTTTGTTTGAGGGTCACTTCTTCTGCTTGCTTGAGGGTTTTACTGAATGGAATAAGAAACTTTATTTGCACTATAAGAAAGACTGAGTGTAGGTAGTGTTTCGTTGTTGTAAGTTTTTGTGTTGTAAATAGTGTCAATTATTAGTTATTAATGGTGACTGAGAGTTTGTAAGCTTGGTGTTGTTTCTGGGAATCGGGTGTGATTTAATGCGAATGCTATAGTGAGTTTTTTGAGCCGATGAACCGAGCAGAAAAGAATTTTTAGAAGTTTTTTTCCAGCACCAAAAATTTTAAGAACTTGTTCTTTACTCCTGTAGTATTTCTTTGATCAAATTATAAAACTAAACCCCAATTTTTCGGAGATTCTGTTTTCCCATGTTTTCTTCAAGTGTGAGTATGCAAAAGGAAAGGGTGTTTAAAGAAACTCTGGATGTTGCTGTTTGTTCTGGTTTAATGGGAGAGAAAAGATAAACTAAAATTTAATTAGTAGACAAGAAAAGGGAAGGTTGATAGATAAATAGATAGTGTTGGGGATCTGTTTTTAAGTTGTTTCCCCATATCTGTATAGGAAAAGAAGCTTACCAATATACACAAGGGCCATCCATATGCCTCTAACCTCAATATGTCGCTTAATTCAAACAAGTCAGTTTCAATGGGGAGATATTGTATTATAAGTATGCTTGCCGAAAGAACCCGAACTATTATGCGATGAAAGGTTGTTTTGCAATCAAGAAAATGTCTAATACTCATGAATTATGTGAGAGATTTTCTCTTGGTTTCATTAGCAACTCCTTTATATTATTGAAGGTTGTTGAGGATCCCACATCGAAAAGTTTGGTGGAGACCTCACAATATATAAGCTTCAAGGGTCACTCCACTCATTGCCAATTGGTTTTGAGATGGAAGCCCATATAATATAATATGATATCAGAGTCCATTAAACCCAAAAATCAATTGCTTAACGTTGCTATTGCCAATTGGTTTTGAGATGGAAGCTCATATAATATAATAAAGGTTGAGGAAATGTGGTTCAAAGCCTAAAGATAAACCATCTTTTTAATGCTAGATTTGGATGAAGGCGTTGTTCCTATTGTTCATAATAGAGGAAGGCTGCTAGGTTGGCCTTGGTTGCGTTATGATCCTAACCTGAAGCGCTGTGATAGCTCAAATGTTTTCTAAATTTCAAGAGTTTATTCTCTTTGAGCCATCTAGTTAAGTTATCTTTGCAATGATTTGATTGCAGTGCTGTTTGTTTTGGTGAATCGATGGCTGAGTAATGGTTCGGAAGGGATGTTCGAGCACTCACAATTGTTTGGAGGAACATGGCCATGGGCGTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCGTATGATCAGTGGGATATGCTGCTATACCGATTATACAGTGGTTGGATCCCTGCAATCTTGGTTCATCATCTCGTTCTCCTGATTTGCTTTACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATCCTCACTCTCATTTGCGAGGTATGCATTAGTTTCTTCATGCAAGATGTGTCATGAATATGCTGCTTTCTTTTCGTTTACATCCTTTCTGGATTTAAATCACTCTTAAAAAAAAAATAAAATAAAATAAAAATAAAATAATAAAATCATTGATAGATGCTCTATCAAGCCTACCAACGTGAGTATAGCTCAATAGTATGACATTTCTACTTCCTTTAAGGAGACTTAGGTTCAAATCTCCACTCATGCCTGTTGTAATATTCTTAAATATTTTACGTAGGGTTATTGACTACATTGCAATATTACGAGAAATTACAACATCGATAACCTTTCAAGAGGGCTATGTCTCTCCCTAAAGTCTTACATTGGACAATACCAAAATAATTCCCCCCCTAAGGTTCCAACTCCCTCTCTTTATAATCAAGACACTCCTAACGAATTGCCACTATGTCCTTATTAATAATATACTAATATTCCCTTACTAGTATTCACACATCTATCTCTACACATTTCTCTCACTAAAATATCTCTCTAAACACCATCTCTCGTAGTTTGTAAAATAATTTCTCGATCTAGTGATGCACGCTCATATGCCGAATATAATGCTTAAATCAAAGAATATGCCTTCTTTGAGGAAAAAGACAGTCATCTTAGGTAGCAAATGCAAGAGAGCGAGCTTGCAGTTTCTTTGCACGTTTGGAAGGACTTTGGAGGCAAATCAGATTCTATTCTTAGAACTACCACACTCCATTATGATCAAACCAAGTTTTCATGTCATATTTTACTTCCAGCTTTTGATATGCAAAACTGAAACAAGAATCATTGTGATGTTCCAGCTGCATTCTATCTTTCTCCACGTAAGGCGATTGCGAAGGATGGCTGGTGTTCGTGACGCCAAGAGCATCATCGTGAAGGTCGAATGGATTCTGAACTGGCTAACGTTCGTTTTCGCAAGGTTCGTGCCGCACATTCTCATCACGGTCAAGCTCGTCATGGATGCTTCGAAGTTTGATAGCGGCGTAGAGCTGCCGCTCGCACTGTTTGGGATGGCTGGCATGAACCTGTTGAATGCTTTTCTTGGCATTGATCTCCTAAACGCTGTTAGGAAAGAGACTAATTACCAGAAAAGTGATCGCCCTCATCATGAATGA

mRNA sequence

ATGGAGAAATGGGCCGAACAAACAGCCCAACCTTCGGAATCGCTCGATCCTCAACTCGCAAGCATTATCTGGTTACCGTTTACCGTGAGGACCGGTGCCTCCCCCTCCTCTCTCCGGTCTCTTCCTTTCTGTTGCTGTCCATCGTCGTCGTCATCACCAGCAGATACAGAACGGACGATCGAGCTTCATAGCGAATCCATGGCCGGTAGGACAGCGTTGAAGGAGAAGAGCAGGGCAGGAAGCTTCTTCTCTGCGACATTAGTGCTTTGGACAGTCTCTCTTTGGTTCGAAATTCTGTTCGACCGGCGCTTCGAGCTCCTCTACCTCGTTTTCGGAGCTCTGTTCTACCAATCCGCCAATTGGATCATTCGAGTTCTTGTTTCAAAGGATCCTCTCTTAGTCAACACCTCTGTCTCTCTCCTTCACTCCATTATCACCTCTTCTTCAGTGCTGTTTGTTTTGGTGAATCGATGGCTGAGTAATGGTTCGGAAGGGATGTTCGAGCACTCACAATTGTTTGGAGGAACATGGCCATGGGCGTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCGTATGATCAGTGGGATATGCTGCTATACCGATTATACAGTGGTTGGATCCCTGCAATCTTGGTTCATCATCTCGTTCTCCTGATTTGCTTTACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATCCTCACTCTCATTTGCGAGCTGCATTCTATCTTTCTCCACGTAAGGCGATTGCGAAGGATGGCTGGTGTTCGTGACGCCAAGAGCATCATCGTGAAGGTCGAATGGATTCTGAACTGGCTAACGTTCGTTTTCGCAAGGTTCGTGCCGCACATTCTCATCACGGTCAAGCTCGTCATGGATGCTTCGAAGTTTGATAGCGGCGTAGAGCTGCCGCTCGCACTGTTTGGGATGGCTGGCATGAACCTGTTGAATGCTTTTCTTGGCATTGATCTCCTAAACGCTGTTAGGAAAGAGACTAATTACCAGAAAAGTGATCGCCCTCATCATGAATGA

Coding sequence (CDS)

ATGGAGAAATGGGCCGAACAAACAGCCCAACCTTCGGAATCGCTCGATCCTCAACTCGCAAGCATTATCTGGTTACCGTTTACCGTGAGGACCGGTGCCTCCCCCTCCTCTCTCCGGTCTCTTCCTTTCTGTTGCTGTCCATCGTCGTCGTCATCACCAGCAGATACAGAACGGACGATCGAGCTTCATAGCGAATCCATGGCCGGTAGGACAGCGTTGAAGGAGAAGAGCAGGGCAGGAAGCTTCTTCTCTGCGACATTAGTGCTTTGGACAGTCTCTCTTTGGTTCGAAATTCTGTTCGACCGGCGCTTCGAGCTCCTCTACCTCGTTTTCGGAGCTCTGTTCTACCAATCCGCCAATTGGATCATTCGAGTTCTTGTTTCAAAGGATCCTCTCTTAGTCAACACCTCTGTCTCTCTCCTTCACTCCATTATCACCTCTTCTTCAGTGCTGTTTGTTTTGGTGAATCGATGGCTGAGTAATGGTTCGGAAGGGATGTTCGAGCACTCACAATTGTTTGGAGGAACATGGCCATGGGCGTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCGTATGATCAGTGGGATATGCTGCTATACCGATTATACAGTGGTTGGATCCCTGCAATCTTGGTTCATCATCTCGTTCTCCTGATTTGCTTTACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATCCTCACTCTCATTTGCGAGCTGCATTCTATCTTTCTCCACGTAAGGCGATTGCGAAGGATGGCTGGTGTTCGTGACGCCAAGAGCATCATCGTGAAGGTCGAATGGATTCTGAACTGGCTAACGTTCGTTTTCGCAAGGTTCGTGCCGCACATTCTCATCACGGTCAAGCTCGTCATGGATGCTTCGAAGTTTGATAGCGGCGTAGAGCTGCCGCTCGCACTGTTTGGGATGGCTGGCATGAACCTGTTGAATGCTTTTCTTGGCATTGATCTCCTAAACGCTGTTAGGAAAGAGACTAATTACCAGAAAAGTGATCGCCCTCATCATGAATGA

Protein sequence

MEKWAEQTAQPSESLDPQLASIIWLPFTVRTGASPSSLRSLPFCCCPSSSSSPADTERTIELHSESMAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVLVSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCFSCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVELPLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE

Homology

[Close]

BLAST of Lag0029232 vs. NCBI nr
Match: XP_022939854.1 (TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016488.1 TLC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 500.0 bits (1286), Expect = 1.7e-137
Identity = 252/280 (90.00%), Postives = 264/280 (94.29%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGRT LKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSAN  IR L
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCF 186
           +SK+PL+VNT+VSLLHSIITS+SVLFVL NRWLS+GS+GMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGSDGMFEHSQLFGGTWPWAYAALCF 120

Query: 187 SCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 246
           SCGYFAYDQWDML YRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 247 FLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVEL 306
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF FARFVPHILIT KL+MDASKFD GVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFTFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 307 PLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           PLALFGMA MNLLN FLGIDL NAV+KE+NYQK+D  HHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHHE 280

[Close]

BLAST of Lag0029232 vs. NCBI nr
Match: XP_023550889.1 (TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499.6 bits (1285), Expect = 2.2e-137
Identity = 252/280 (90.00%), Postives = 266/280 (95.00%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGRT LKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSAN  IR L
Sbjct: 1   MAGRTMLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCF 186
           +SK+PL+VNT+VSLLHSIITS+SVLFVLVNRWLS+GS+GMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLVNRWLSHGSDGMFEHSQLFGGTWPWAYAALCF 120

Query: 187 SCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 246
           SCGYFAYDQWDML YRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 247 FLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVEL 306
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILIT KL+MDASKFD GVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 307 PLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           PLALFGMA MNLLN FLGIDL NAV+KE+NYQK+D  H+E
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHNE 280

[Close]

BLAST of Lag0029232 vs. NCBI nr
Match: XP_022992953.1 (TLC domain-containing protein 2 [Cucurbita maxima])

HSP 1 Score: 498.0 bits (1281), Expect = 6.4e-137
Identity = 250/280 (89.29%), Postives = 265/280 (94.64%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGRT LKE+SRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSAN  IR L
Sbjct: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCF 186
           +SK+PL+VNT+VSLLHSIITS+SVLF+LVNRWLS+G +GMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120

Query: 187 SCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 246
           SCGYFAYDQWDML YRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 247 FLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVEL 306
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILIT KL+MDASKFD GVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 307 PLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           PLALFGMA MNLLN FLGIDL NAV+KE+NYQK+D  HHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 280

[Close]

BLAST of Lag0029232 vs. NCBI nr
Match: XP_008466713.1 (PREDICTED: TLC domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 493.0 bits (1268), Expect = 2.0e-135
Identity = 253/282 (89.72%), Postives = 266/282 (94.33%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGRT LKEKSRAGSFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSAN  IRVL
Sbjct: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLS--NGSEGMFEHSQLFGGTWPWAYAAL 186
           VSKDPLLVNTSVSLLHSI+TS+SVLFVLVNRWLS  + SEGMFEHSQLFGGTWPWAYAAL
Sbjct: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120

Query: 187 CFSCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 246
           CFSCGYFAYDQWDML Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CE+H
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180

Query: 247 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGV 306
           SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKL++DA KFD GV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240

Query: 307 ELPLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           ELPLAL GM GMNLLNA LGIDLLNAVRKE+NY+K+D  HHE
Sbjct: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282

[Close]

BLAST of Lag0029232 vs. NCBI nr
Match: XP_038884583.1 (TLC domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 490.7 bits (1262), Expect = 1.0e-134
Identity = 251/280 (89.64%), Postives = 263/280 (93.93%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGRT LKEK RAGSFFSATLVLW+VSL FEILFDRRFELLY+VFGALFYQSAN  IR L
Sbjct: 1   MAGRTVLKEKRRAGSFFSATLVLWSVSLCFEILFDRRFELLYVVFGALFYQSANSAIRFL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCF 186
           VSKDPLLVNTSVSLLHS ITS+SVLFVLVNRWLS GSEG+FEHSQLFGGTWPWAYAALCF
Sbjct: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGIFEHSQLFGGTWPWAYAALCF 120

Query: 187 SCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 246
           SCGYFAYDQWDML Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE+HSI
Sbjct: 121 SCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI 180

Query: 247 FLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVEL 306
           FLHVRRLRRMAGVRDAKS+IVKVEWILNWLTFVFARFVPHILIT KL+MDASKFD G+EL
Sbjct: 181 FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL 240

Query: 307 PLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           PLAL GMAGMNLLNA LG+DLL+AVRKE+ YQK+D  HHE
Sbjct: 241 PLALSGMAGMNLLNALLGMDLLSAVRKESYYQKTDHSHHE 280

[Close]

BLAST of Lag0029232 vs. ExPASy Swiss-Prot
Match: A8WGS4 (TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 59/213 (27.70%), Postives = 105/213 (49.30%), Query Frame = 0


Query: 135 NTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCFSCGYFAYD 194
           N S S +HS+IT   V  VL        +E + E   +F      ++A +  S GYF YD
Sbjct: 42  NISTSFVHSLIT--GVWSVLCFCMHPQMAEDLIETHSVF------SHALVSVSIGYFIYD 101

Query: 195 QWDMLL-YRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRRL 254
             DM++  ++   W   +L HH+V++ CF +++     + + ++ L+ E++S+FLH+R++
Sbjct: 102 FLDMVINQKIIHSW--ELLFHHVVVITCFGISVLTCRYVGFAVVALLVEINSVFLHLRQV 161

Query: 255 RRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVELPLALFGM 314
            RMA +  AKS   +V  ++N  T+V  R      +T  LV++           +   G+
Sbjct: 162 LRMANL--AKSTFYRVNSMINLGTYVVFRINTLAWMTRWLVLNRDLIPL-FSYTIGSVGL 221

Query: 315 AGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           A M  +N  L   L+ +   + + +K  R   E
Sbjct: 222 AIMTAMNIVLFYRLMRSDFMKASREKELRKEKE 241

[Close]

BLAST of Lag0029232 vs. ExPASy Swiss-Prot
Match: A6NGC4 (TLC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=TLCD2 PE=3 SV=3)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 64/244 (26.23%), Postives = 113/244 (46.31%), Query Frame = 0


Query: 109 LVFGALF--YQSANWIIRVLVSKDPLL------VNTSVSLLHSIITSSSVLFVLVNRWLS 168
           LV GA F  ++  +W +R L + +          N  VSL HS+++ +  L  L + +  
Sbjct: 7   LVAGASFLAFRGLHWGLRRLPTPESAARDRWQWWNLCVSLAHSLLSGTGALLGL-SLYPQ 66

Query: 169 NGSEGMFEHSQLFGGTWPWAYAALCFSCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLI 228
             ++ +  H +       WA   +  S GYF  D  D LL+    G    +L HHLV++ 
Sbjct: 67  MAADPIHGHPR-------WALVLVAVSVGYFLADGAD-LLWNQTLGKTWDLLCHHLVVVS 126

Query: 229 CFTLALYRNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVF 288
           C + A+     + + +++L+ EL+S  LH+R+L  ++  R A S+   V    +  T   
Sbjct: 127 CLSTAVLSGHYVGFSMVSLLLELNSACLHLRKLLLLS--RQAPSLAFSVTSWASLATLAL 186

Query: 289 ARFVPHILITVKLVMDASKFDSGVELPLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKS 345
            R VP   +++ L      F    ++PLAL  + G+ L+   + + ++  +R   N    
Sbjct: 187 FRLVPLGWMSLWL------FRQHHQVPLALVTLGGIGLVTVGI-MSIILGIRILVNDVLQ 232

[Close]

BLAST of Lag0029232 vs. ExPASy TrEMBL
Match: A0A6J1FID3 (TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 8.1e-138
Identity = 252/280 (90.00%), Postives = 264/280 (94.29%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGRT LKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSAN  IR L
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCF 186
           +SK+PL+VNT+VSLLHSIITS+SVLFVL NRWLS+GS+GMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGSDGMFEHSQLFGGTWPWAYAALCF 120

Query: 187 SCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 246
           SCGYFAYDQWDML YRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 247 FLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVEL 306
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF FARFVPHILIT KL+MDASKFD GVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFTFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 307 PLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           PLALFGMA MNLLN FLGIDL NAV+KE+NYQK+D  HHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHHE 280

[Close]

BLAST of Lag0029232 vs. ExPASy TrEMBL
Match: A0A6J1K0R9 (TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 3.1e-137
Identity = 250/280 (89.29%), Postives = 265/280 (94.64%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGRT LKE+SRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSAN  IR L
Sbjct: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCF 186
           +SK+PL+VNT+VSLLHSIITS+SVLF+LVNRWLS+G +GMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120

Query: 187 SCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 246
           SCGYFAYDQWDML YRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 247 FLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVEL 306
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILIT KL+MDASKFD GVEL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 307 PLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           PLALFGMA MNLLN FLGIDL NAV+KE+NYQK+D  HHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 280

[Close]

BLAST of Lag0029232 vs. ExPASy TrEMBL
Match: A0A1S3CRX5 (TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 9.9e-136
Identity = 253/282 (89.72%), Postives = 266/282 (94.33%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGRT LKEKSRAGSFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSAN  IRVL
Sbjct: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLS--NGSEGMFEHSQLFGGTWPWAYAAL 186
           VSKDPLLVNTSVSLLHSI+TS+SVLFVLVNRWLS  + SEGMFEHSQLFGGTWPWAYAAL
Sbjct: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120

Query: 187 CFSCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 246
           CFSCGYFAYDQWDML Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CE+H
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180

Query: 247 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGV 306
           SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKL++DA KFD GV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240

Query: 307 ELPLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           ELPLAL GM GMNLLNA LGIDLLNAVRKE+NY+K+D  HHE
Sbjct: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282

[Close]

BLAST of Lag0029232 vs. ExPASy TrEMBL
Match: A0A0A0KH54 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.4e-134
Identity = 252/282 (89.36%), Postives = 267/282 (94.68%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGRT LKEKSRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSAN  IR+L
Sbjct: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLS--NGSEGMFEHSQLFGGTWPWAYAAL 186
           +SKDPLLVNTSVSLLHSIITS+SVLFVLVNRWLS  +GSEGMFEHSQLFGGTWPWA+AAL
Sbjct: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120

Query: 187 CFSCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 246
           CFSCGYFAYDQWDML Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE+H
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMH 180

Query: 247 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGV 306
           SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKL++DASKFD GV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGV 240

Query: 307 ELPLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           ELPLAL GMAGMNLLNA LGIDLLNAV+KE+NY+K+D  HHE
Sbjct: 241 ELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE 282

[Close]

BLAST of Lag0029232 vs. ExPASy TrEMBL
Match: A0A6J1CKF5 (TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011955 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 4.8e-130
Identity = 243/280 (86.79%), Postives = 256/280 (91.43%), Query Frame = 0


Query: 67  MAGRTALKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVL 126
           MAGR   KEKSRAGSFFSATLVLW VS+WFEILF RR ELLY+VFGALFYQSANW +R L
Sbjct: 1   MAGRRVPKEKSRAGSFFSATLVLWIVSIWFEILFYRRSELLYVVFGALFYQSANWTVRAL 60

Query: 127 VSKDPLLVNTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCF 186
           VSKDPL VNTSVSLLHS ITS+SVLF+LV++WLS GS GMFEHSQL GGTW  AYAALCF
Sbjct: 61  VSKDPLFVNTSVSLLHSTITSASVLFILVSQWLSYGSHGMFEHSQLVGGTWSGAYAALCF 120

Query: 187 SCGYFAYDQWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 246
           SCGYFAYDQWDMLLY+LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI
Sbjct: 121 SCGYFAYDQWDMLLYQLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 247 FLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVEL 306
           FLHVRRLRRMAGVRDAKSI+VKVEWILNWLTFVFAR VPHILIT KLV+DASKFD GVEL
Sbjct: 181 FLHVRRLRRMAGVRDAKSIVVKVEWILNWLTFVFARVVPHILITAKLVVDASKFDRGVEL 240

Query: 307 PLALFGMAGMNLLNAFLGIDLLNAVRKETNYQKSDRPHHE 347
           PLAL GMAGMNLLNAFLGIDL+NAV+KE+ YQK D P  E
Sbjct: 241 PLALSGMAGMNLLNAFLGIDLINAVKKESKYQKRDHPRRE 280

[Close]

BLAST of Lag0029232 vs. TAIR 10
Match: AT1G21790.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 372.9 bits (956), Expect = 2.9e-103
Identity = 181/266 (68.05%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 75  EKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANWIIRVLVSKDPLLV 134
           +K+ AG FF ATL+LW VS+ FEI F+ R ELL+++ G  F+Q  NW++R  +S+DP+ V
Sbjct: 12  KKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPIFV 71

Query: 135 NTSVSLLHSIITSSSVLFVLVNRWLSNGSEGMFEHSQLFGGTWPWAYAALCFSCGYFAYD 194
           NTSVSLLHSIITS+SV+F+L+N+ L+ G + MF+HS+L GGTW WAY ALCFSCGYFAYD
Sbjct: 72  NTSVSLLHSIITSASVVFILLNQCLAKGLDEMFDHSELVGGTWKWAYPALCFSCGYFAYD 131

Query: 195 QWDMLLYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRRLR 254
           QWDML YRLYSG IP+ILVHHLVLL+CFTLALYRNVTINYLILTLICE+HSIFLHVR+LR
Sbjct: 132 QWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLILTLICEMHSIFLHVRKLR 191

Query: 255 RMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLVMDASKFDSGVELPLALFGMA 314
           RMAG+RD+ + +VK+EW+LNW  FVFAR +PHILIT+KL+ DA KF  GVELPLAL GMA
Sbjct: 192 RMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKLIKDAHKFGKGVELPLALSGMA 251

Query: 315 GMNLLNAFLGIDLLNAVRKETNYQKS 341
           GMN+LN  LG+DL +A R+E +++++
Sbjct: 252 GMNILNVGLGLDLFHAFRRERSHRRN 277

The following BLAST results are available for this feature:

BLAST of Lag0029232 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939854.1	1.7e-137	90.00	TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-co...	[more]
XP_023550889.1	2.2e-137	90.00	TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022992953.1	6.4e-137	89.29	TLC domain-containing protein 2 [Cucurbita maxima]	[more]
XP_008466713.1	2.0e-135	89.72	PREDICTED: TLC domain-containing protein 2 [Cucumis melo]	[more]
XP_038884583.1	1.0e-134	89.64	TLC domain-containing protein 2 [Benincasa hispida]	[more]

BLAST of Lag0029232 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8WGS4	1.3e-07	27.70	TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1	[more]
A6NGC4	1.3e-04	26.23	TLC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=TLCD2 PE=3 SV=3	[more]

BLAST of Lag0029232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FID3	8.1e-138	90.00	TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE...	[more]
A0A6J1K0R9	3.1e-137	89.29	TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4...	[more]
A0A1S3CRX5	9.9e-136	89.72	TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=...	[more]
A0A0A0KH54	1.4e-134	89.36	TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV...	[more]
A0A6J1CKF5	4.8e-130	86.79	TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Lag0029232 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21790.1	2.9e-103	68.05	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 128..333 e-value: 1.3E-31 score: 121.0
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 135..324 e-value: 2.1E-18 score: 66.8
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 128..336 score: 15.198283
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 82..343
None	No IPR available	PANTHER	PTHR13439:SF4	TLC DOMAIN-CONTAINING PROTEIN FLD-1	coord: 82..343

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029232.1	Lag0029232.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071709	membrane assembly
biological_process	GO:0055091	phospholipid homeostasis
biological_process	GO:0007009	plasma membrane organization
biological_process	GO:0097035	regulation of membrane lipid distribution
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane