Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCGGAAGTGCCTCAGAAGTTCAAAATACCAACTTTTCAGCAGTACGACGAGAAGAAGGACCCGGTTCAGCATCCAGACACGTACAAACCCTGGATGGATTTCCATGGAGCGTCTGAAGCAACAAAGTGTCGAGCTTTCGCCCTCACCTTAACAGGGATGACCAAACAACAGTTTAGCAAGCTGCCTTGGAGGTCCATCGGATCGTTCAAGGAGTTAGCACGAGCATTTGTCATGCAATTTCTAGGAGCCAGGGATCGACGTAAGCCAGAGATCAACCTGTTAACCATCAAACAGGGACCAAGAGAAAGCTTACGAGACTATATATCAACGTTCAGTAACGAGGTTCTGCAGTGGAAGGATATGATGACGAAGTTGCACTAACTGTTGTTATTTCAAGTTTGTAGAATGAGAAACTGTTGAATTCAATTGGTGAGAGCCAACCACGCACCTATGTAGAATTCATGACCTGGGTGCAAAGATACATAAGCGCTGAAGAATTGTTGAAGTCGAAGTAGGCAGAAAGGGAAGCCTCGGGAATTACTGCTTACGACCGAAAGAAAGATGATAGAGAAAAAAAACGTCGAGGTGATGAGGAACATCAAGATGAAGCAGGATGCTCCACAGGTCGAGGCCGAGCAAACACCAAGGAAGGTGAGGGCCGAGGAGACTTGAAGGGGAGATTCGATAAATATACTCCACTGTCCGTCCCACCTGAGAAAATCCTGACAGTAGTGCAAAATACAGATTTGTTGAAATGCCTAGAGAAACTCAAGACAGGCCCGAACAGGTGAAATAAAAAAAAGTACTGCATGTCCCATCGAGAACTTGGGCACACCACCCAGAAATGCACACAGTTAAGGGACAAGATAGAAAACTTGATCAAAGAAGGTTACCTGAAGGAGTTTGTCAGTGATGGTAGCCGTATAAAGTCGGGCATGGCAGAATGAGACCGAGATGATGACGATCCGCCACTGGAAATTCGGACTATCTCTGGAGGTTCTGTTGGGGAAGATTCCAGTCGAAAAAGGAAGGTTGGGGCTCGAGAGGCTCGCCTTGAACCAAAACACCAAGGTATGTATTCTCTTCAGTTTGAAAAAACTACACATGCCTTAGAGTTTACAGAGAAAGAAGCTGCTGGAATACATCACCCTCACAATGACGCATTGGTGGTAACTTTGACCATCGTCAATGCAAAAGTCCATCGGATCCTGATTGACGGAGGAAGTTCAACCGATGTTCTCTCCACAACTGTGTTCGAGGCCATGAAGCTAGGAAAAGACCGCTTGAAGCCGAGTCCCACACCATTGGTGGGATTTGGGGGAGAAAAAGTGAGCCCTAAAGGAAGCATTGAACTACCAGTTACCTTTGGAGAAGGGCGACAAATACTGACAAAGATGGTCAACTTCTTGGTAGTAGATTGCGTCTCAGCTTATAACACCATACTGGGAAGGTCGACCTTGCATGAACTCAAAGCCGTGACGTCAACTCACTACCAGATCCTGAAGTTTCCTACCGAGGAAGGTGTAGGAGTGGTGCATGGAGAACAAAGAATATCTCAAGAGTGCTACTTCACAGCACTCAAAGAAACCAAGAAAAGAACCAAAGTAGTCACGTGCTCGAGCAATGGTTGA
mRNA sequence
ATGGAAGCGGAAGTGCCTCAGAAGTTCAAAATACCAACTTTTCAGCAGTACGACGAGAAGAAGGACCCGGTTCAGCATCCAGACACGTACAAACCCTGGATGGATTTCCATGGAGCGTCTGAAGCAACAAAGTGTCGAGCTTTCGCCCTCACCTTAACAGGGATGACCAAACAACAGTTTAGCAAGCTGCCTTGGAGGTCCATCGGATCGTTCAAGGAGTTAGCACGAGCATTTGTCATGCAATTTCTAGGAGCCAGGGATCGACGTAAGCCAGAGATCAACCTGTTAACCATCAAACAGGGACCAAGAGAAAGCTTACGAGACTATATATCAACGTTCAGTAACGAGGCAGAAAGGGAAGCCTCGGGAATTACTGCTTACGACCGAAAGAAAGATGATAGAGAAAAAAAACGTCGAGGTGATGAGGAACATCAAGATGAAGCAGGATGCTCCACAGGTCGAGGCCGAGCAAACACCAAGGAAGGTGAGGGCCGAGGAGACTTGAAGGGGAGATTCGATAAATATACTCCACTGTCCGTCCCACCTGAGAAAATCCTGACAGTAGTGCAAAATACAGATTTGTTGAAATGCCTAGAGAAACTCAAGACAGGCCCGAACAGTCGAAAAAGGAAGGTTGGGGCTCGAGAGGCTCGCCTTGAACCAAAACACCAAGGTATGTATTCTCTTCAGTTTGAAAAAACTACACATGCCTTAGAGTTTACAGAGAAAGAAGCTGCTGGAATACATCACCCTCACAATGACGCATTGGTGGTAACTTTGACCATCGTCAATGCAAAAGTCCATCGGATCCTGATTGACGGAGGAAGTTCAACCGATGTTCTCTCCACAACTGTGTTCGAGGCCATGAAGCTAGGAAAAGACCGCTTGAAGCCGAGTCCCACACCATTGGTGGGATTTGGGGGAGAAAAAGTGAGCCCTAAAGGAAGCATTGAACTACCAGTTACCTTTGGAGAAGGGCGACAAATACTGACAAAGATGGTCAACTTCTTGGTAGTAGATTGCGTCTCAGCTTATAACACCATACTGGGAAGGTCGACCTTGCATGAACTCAAAGCCGTGACGTCAACTCACTACCAGATCCTGAAGTTTCCTACCGAGGAAGGTGTAGGAGTGGTGCATGGAGAACAAAGAATATCTCAAGAGTGCTACTTCACAGCACTCAAAGAAACCAAGAAAAGAACCAAAGTAGTCACGTGCTCGAGCAATGGTTGA
Coding sequence (CDS)
ATGGAAGCGGAAGTGCCTCAGAAGTTCAAAATACCAACTTTTCAGCAGTACGACGAGAAGAAGGACCCGGTTCAGCATCCAGACACGTACAAACCCTGGATGGATTTCCATGGAGCGTCTGAAGCAACAAAGTGTCGAGCTTTCGCCCTCACCTTAACAGGGATGACCAAACAACAGTTTAGCAAGCTGCCTTGGAGGTCCATCGGATCGTTCAAGGAGTTAGCACGAGCATTTGTCATGCAATTTCTAGGAGCCAGGGATCGACGTAAGCCAGAGATCAACCTGTTAACCATCAAACAGGGACCAAGAGAAAGCTTACGAGACTATATATCAACGTTCAGTAACGAGGCAGAAAGGGAAGCCTCGGGAATTACTGCTTACGACCGAAAGAAAGATGATAGAGAAAAAAAACGTCGAGGTGATGAGGAACATCAAGATGAAGCAGGATGCTCCACAGGTCGAGGCCGAGCAAACACCAAGGAAGGTGAGGGCCGAGGAGACTTGAAGGGGAGATTCGATAAATATACTCCACTGTCCGTCCCACCTGAGAAAATCCTGACAGTAGTGCAAAATACAGATTTGTTGAAATGCCTAGAGAAACTCAAGACAGGCCCGAACAGTCGAAAAAGGAAGGTTGGGGCTCGAGAGGCTCGCCTTGAACCAAAACACCAAGGTATGTATTCTCTTCAGTTTGAAAAAACTACACATGCCTTAGAGTTTACAGAGAAAGAAGCTGCTGGAATACATCACCCTCACAATGACGCATTGGTGGTAACTTTGACCATCGTCAATGCAAAAGTCCATCGGATCCTGATTGACGGAGGAAGTTCAACCGATGTTCTCTCCACAACTGTGTTCGAGGCCATGAAGCTAGGAAAAGACCGCTTGAAGCCGAGTCCCACACCATTGGTGGGATTTGGGGGAGAAAAAGTGAGCCCTAAAGGAAGCATTGAACTACCAGTTACCTTTGGAGAAGGGCGACAAATACTGACAAAGATGGTCAACTTCTTGGTAGTAGATTGCGTCTCAGCTTATAACACCATACTGGGAAGGTCGACCTTGCATGAACTCAAAGCCGTGACGTCAACTCACTACCAGATCCTGAAGTTTCCTACCGAGGAAGGTGTAGGAGTGGTGCATGGAGAACAAAGAATATCTCAAGAGTGCTACTTCACAGCACTCAAAGAAACCAAGAAAAGAACCAAAGTAGTCACGTGCTCGAGCAATGGTTGA
Protein sequence
MEAEVPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLPWRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYISTFSNEAEREASGITAYDRKKDDREKKRRGDEEHQDEAGCSTGRGRANTKEGEGRGDLKGRFDKYTPLSVPPEKILTVVQNTDLLKCLEKLKTGPNSRKRKVGAREARLEPKHQGMYSLQFEKTTHALEFTEKEAAGIHHPHNDALVVTLTIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRLKPSPTPLVGFGGEKVSPKGSIELPVTFGEGRQILTKMVNFLVVDCVSAYNTILGRSTLHELKAVTSTHYQILKFPTEEGVGVVHGEQRISQECYFTALKETKKRTKVVTCSSNG
Homology
BLAST of Lag0028811 vs. NCBI nr
Match:
XP_030963881.1 (uncharacterized protein LOC115985047 [Quercus lobata])
HSP 1 Score: 250.0 bits (637), Expect = 3.6e-62
Identity = 159/445 (35.73%), Postives = 229/445 (51.46%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P KFK+P+ YD +DP H T+K M G + CRAF TL G + FSK+P
Sbjct: 34 LPSKFKLPSLDSYDGTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGSARVWFSKIP 93
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYISTFSNEA----ERE 124
S+ SF+EL++ FV F+G + ++ NLLTI+QG ESLR +I+ F+ EA E +
Sbjct: 94 PNSVSSFEELSKLFVNNFIGGQRYKRSSSNLLTIEQGENESLRSFITRFNREALSVDEAD 153
Query: 125 ASGITAYDRKKDDREKKRRGDEEHQDEAGCSTGRGRANTKEGEGRGDLKGR----FDKYT 184
+ A R ++ + E G +G T+E R K +YT
Sbjct: 154 DKLLLAAFHNGRKRSERMDANPSRHHEQGTRPKKGW--TEERRDRESKKPGPSVWNQQYT 213
Query: 185 PLSVPPEKILTVVQNTDLLKCLEKLKTGPNSRKRK-----------------------VG 244
PL+ P E++L +++ LK EK+K PN R R +
Sbjct: 214 PLNAPLEQVLMQIKDDPSLKWPEKMKGDPNKRNRNKEVEGFPWTRPEGRETEGKDGRIIA 273
Query: 245 AREARLEPKHQGMYSLQFEKTTHAL------------------------EFTEKEAAGIH 304
R + H G ++ + ++ FT+++A IH
Sbjct: 274 TTTRRDKSHHWGKFNWPVVQVQESILEGSTERPAFWTITKSKVYGRVDKTFTDEDADRIH 333
Query: 305 HPHNDALVVTLTIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRLKPSPTPLVGFGGE 364
HPH+DALV++L I N R+L+D GSS D+L F+ M+LG+D+L+P +PLVGFGG
Sbjct: 334 HPHDDALVISLLIANYTTRRVLVDNGSSADILYYPAFQQMRLGRDQLRPVNSPLVGFGGI 393
Query: 365 KVSPKGSIELPVTFGEGRQILTKMVNFLVVDCVSAYNTILGRSTLHELKAVTSTHYQILK 395
KV P G+I L V + +TK VNFLVVDC S+YN I+GR TL+ KAVTST++ +K
Sbjct: 394 KVQPVGTISLSVVVRAYPRQITKDVNFLVVDCPSSYNAIIGRPTLNSWKAVTSTYHLSVK 453
BLAST of Lag0028811 vs. NCBI nr
Match:
XP_030955724.1 (uncharacterized protein LOC115977839 [Quercus lobata])
HSP 1 Score: 241.9 bits (616), Expect = 9.7e-60
Identity = 163/497 (32.80%), Postives = 236/497 (47.48%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P KFK+P+ YD +DP H T+K M G + CRAF TL G + FSK+P
Sbjct: 41 LPSKFKLPSLDSYDGTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGPARVWFSKIP 100
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYISTFSNEA------- 124
S+ SF+EL++ FV F+G + ++ +LLTI+QG ESLR +I+ F+ EA
Sbjct: 101 PSSVSSFEELSKLFVNNFIGGQRHKRSSSSLLTIEQGENESLRSFITRFNREALSVDEVD 160
Query: 125 ----------------------EREASGITAYDRKKDDREKKRRGDEEHQDEAGCSTGRG 184
E+E + RK+ +R + H ++A
Sbjct: 161 DKLLLAAFHNGINSDLFIHKLYEKEPQTMAELKRKRAERMEAH--PVRHSEQAPRPKKGR 220
Query: 185 RANTKEGEGR--GDLKGRFDKYTPLSVPPEKILTVVQNTDLLKCLEKLKTGPNSRKRKVG 244
+ KE +GR G L GR YTPL+ P ++L +++ LK EK+K PN R +
Sbjct: 221 TEDRKERDGRKTGPL-GRSQNYTPLNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRNKNKY 280
Query: 245 AR---------------------------------EARLEPKHQG--------------- 304
R R + K +G
Sbjct: 281 CRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDEKLKGKMEESSRPPLGEIRI 340
Query: 305 ------MYSLQFEKTTH----------------------ALEFTEKEAAGIHHPHNDALV 364
M K T+ + FT+++A IHHPH+DA+V
Sbjct: 341 IVGGNPMGQSSKSKKTYLKAVQNVQLSGRPPRTRFMDEPTISFTDEDAERIHHPHDDAIV 400
Query: 365 VTLTIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRLKPSPTPLVGFGGEKVSPKGSI 395
+TL I + R+L+D GSS D+L F+ M+LG+D+L+P +PL+GF G KV P G+I
Sbjct: 401 ITLLIADYTTRRVLVDNGSSADILYYPTFQQMRLGRDQLRPVCSPLIGFKGMKVQPVGTI 460
BLAST of Lag0028811 vs. NCBI nr
Match:
XP_023916366.1 (uncharacterized protein LOC112027956 [Quercus suber])
HSP 1 Score: 235.3 bits (599), Expect = 9.1e-58
Identity = 162/510 (31.76%), Postives = 240/510 (47.06%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P KFK+P+ YD +DP H T+K M G + CRAF TL G + FSK+P
Sbjct: 147 LPPKFKMPSLDSYDGTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGPARVWFSKIP 206
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYISTFSNE-------- 124
S+ SF+EL++ FV F+G + ++ +LLTI+QG ESLR +I+ F+ +
Sbjct: 207 PNSVTSFEELSKLFVNNFIGGQRHKRSSSSLLTIEQGENESLRSFITRFNRDALAVDEVD 266
Query: 125 -----------------------------------AEREASGITAYDRKKDDREKKRRGD 184
A+ + A KK R ++ +
Sbjct: 267 DKLLLAAFHNGVHSDLFIHKLYEQAPQTMAELVHSAQNFMNAEDAIIAKKRKRLERVEAN 326
Query: 185 EEHQDEAGCSTGRGRA-NTKEGEGRGDLKGRFDKYTPLSVPPEKILTVVQNTDLLKCLEK 244
Q E G +GR + K+ + + R +YTPL++P E++L +++ LK EK
Sbjct: 327 PMRQSEQGPRPKKGRTKDRKDRDKKAGPSARNQQYTPLNMPLEQVLMQIKDEPSLKWPEK 386
Query: 245 LKTGPNSRKRKVGAR-------------------------------------EARLEPKH 304
++ PN R R R + +L+ K
Sbjct: 387 MRGDPNKRNRSKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLKNFLGRDHKDEKLKGKI 446
Query: 305 Q---------------GMYSLQFEKTTHA------------------------LEFTEKE 364
+ G + Q +T A + FT+KE
Sbjct: 447 EESSRPPLGEIRVIIGGSSAGQSSETKKAYLKEVQSVQLFGRSPRARSTDEQTITFTDKE 506
Query: 365 AAGIHHPHNDALVVTLTIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRLKPSPTPLV 395
A IHHPH+DA+V+ L I + R+L+D GSS D+L F+ M++G+++L+P +PLV
Sbjct: 507 AERIHHPHDDAIVIALLIADYTTRRVLVDNGSSADILYYPAFQQMRVGRNQLRPVHSPLV 566
BLAST of Lag0028811 vs. NCBI nr
Match:
XP_030958631.1 (uncharacterized protein LOC115980538 [Quercus lobata])
HSP 1 Score: 235.0 bits (598), Expect = 1.2e-57
Identity = 165/508 (32.48%), Postives = 234/508 (46.06%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P KFK+P+ YD +DP H T+K M G + CRAF TL G + FSK+P
Sbjct: 103 LPSKFKLPSLDSYDRTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGPARVWFSKIP 162
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYISTFSNEA------- 124
S+ +F+EL++ FV F+G + ++ +LLTI+QG ESLR +I+ F+ EA
Sbjct: 163 PSSVSTFEELSKLFVNNFIGGQRHKRSSSSLLTIEQGENESLRSFITRFNREALSVDEVD 222
Query: 125 ----------------------EREASGIT--------------AYDRKKDDREKKRRGD 184
E+E + A KK R ++
Sbjct: 223 DKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAERMEAH 282
Query: 185 EEHQDEAGCSTGRGRA-NTKEGEGR--GDLKGRFDKYTPLSVPPEKILTVVQNTDLLKCL 244
E +GR + KE +GR G L GR YTPL+ P ++L +++ LK
Sbjct: 283 PARHSEQAPRPKKGRTEDRKERDGRKTGPL-GRSQNYTPLNAPLNQVLMQIKDDPSLKWP 342
Query: 245 EKLKTGPNSRKRKVGAR---------------------------------EARLEPKHQG 304
EK+K PN R + R R + K +G
Sbjct: 343 EKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDEKQKG 402
Query: 305 ---------------------MYSLQFEKTTH----------------------ALEFTE 364
M K T+ + FT
Sbjct: 403 KMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRTPRTRPMDEPTISFTN 462
Query: 365 KEAAGIHHPHNDALVVTLTIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRLKPSPTP 391
++A IHHPH+DA+V+TL I + R+L+D GSS DVL F+ M+LG+D+L+ +P
Sbjct: 463 EDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADVLYYPAFQQMRLGRDQLRAVCSP 522
BLAST of Lag0028811 vs. NCBI nr
Match:
XP_030958629.1 (uncharacterized protein LOC115980536 [Quercus lobata])
HSP 1 Score: 235.0 bits (598), Expect = 1.2e-57
Identity = 165/508 (32.48%), Postives = 234/508 (46.06%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P KFK+P+ YD +DP H T+K M G + CRAF TL G + FSK+P
Sbjct: 146 LPSKFKLPSLDSYDRTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGPARVWFSKIP 205
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYISTFSNEA------- 124
S+ +F+EL++ FV F+G + ++ +LLTI+QG ESLR +I+ F+ EA
Sbjct: 206 PSSVSTFEELSKLFVNNFIGGQRHKRSSSSLLTIEQGENESLRSFITRFNREALSVDEVD 265
Query: 125 ----------------------EREASGIT--------------AYDRKKDDREKKRRGD 184
E+E + A KK R ++
Sbjct: 266 DKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAERMEAH 325
Query: 185 EEHQDEAGCSTGRGRA-NTKEGEGR--GDLKGRFDKYTPLSVPPEKILTVVQNTDLLKCL 244
E +GR + KE +GR G L GR YTPL+ P ++L +++ LK
Sbjct: 326 PARHSEQAPRPKKGRTEDRKERDGRKTGPL-GRSQNYTPLNAPLNQVLMQIKDDPSLKWP 385
Query: 245 EKLKTGPNSRKRKVGAR---------------------------------EARLEPKHQG 304
EK+K PN R + R R + K +G
Sbjct: 386 EKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDEKQKG 445
Query: 305 ---------------------MYSLQFEKTTH----------------------ALEFTE 364
M K T+ + FT
Sbjct: 446 KMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRTPRTRPMDEPTISFTN 505
Query: 365 KEAAGIHHPHNDALVVTLTIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRLKPSPTP 391
++A IHHPH+DA+V+TL I + R+L+D GSS DVL F+ M+LG+D+L+ +P
Sbjct: 506 EDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADVLYYPAFQQMRLGRDQLRAVCSP 565
BLAST of Lag0028811 vs. ExPASy TrEMBL
Match:
A0A2N9EKU0 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3233 PE=4 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 1.5e-61
Identity = 158/451 (35.03%), Postives = 235/451 (52.11%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P KF++P+ + +D KDP+ H +++K M G + CRAF TL G + F KL
Sbjct: 324 LPSKFRMPSLEIFDGSKDPLDHLESFKTVMCLQGVPDEIMCRAFPTTLKGPARIWFKKLM 383
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYI-----STFSN---E 124
S+GSF +L+R F F+G + +P +LL +KQ E+LR Y+ ST + E
Sbjct: 384 PSSVGSFAQLSRLFFNHFIGGQRYGRPTTHLLNVKQKEGETLRSYLTRDPPSTMTEMMYE 443
Query: 125 AEREASGITAYDRKKDDREKKRRGD------EEHQDEAGCSTGR-GRANTKEGEGRGDLK 184
A+R +G A + KKR+GD E H+ R GR + G G +
Sbjct: 444 AQRYMNGEEALLARDQATGKKRKGDHADRPAEPHETRPKAQRNRNGRQEERSGRGFNE-- 503
Query: 185 GRFDKYTPLSVPPEKILTVVQNTDLLKCLEKLKTGPNSR--------------------- 244
RF+++TPL+ P + I ++N LK KL T P+ R
Sbjct: 504 -RFNRFTPLNAPVDHIFMQIRNDPALKWPGKLLTDPDKRPRDKYCRFHRDHGHNTENCYD 563
Query: 245 -KRKV--------------------GAREARLEPKHQGMYSLQFEKTTHA----LEFTEK 304
KR++ +R+A H + + + K + FTE+
Sbjct: 564 LKRQIEELIKQGKLQRFIEKGGTSRSSRKAYARQIHNVLVTQKSNKKPRVEDLPITFTEE 623
Query: 305 EAAGIHHPHNDALVVTLTIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRLKPSPTPL 364
+A + HPH+DALVVT+ I R+LID GSS D++ T F+ MK+GKD+L+P TPL
Sbjct: 624 DACKVVHPHDDALVVTMEIAGYSTRRVLIDNGSSADIIYLTAFQQMKIGKDQLQPIETPL 683
Query: 365 VGFGGEKVSPKGSIELPVTFGEGRQILTKMVNFLVVDCVSAYNTILGRSTLHELKAVTST 395
VGF G + P G + L + G + K VNFLVVDC SAYN I+GR TL+ L+AVTST
Sbjct: 684 VGFAGTSIYPLGMVTLQIIAGTHPKQAMKKVNFLVVDCPSAYNVIIGRPTLNRLRAVTST 743
BLAST of Lag0028811 vs. ExPASy TrEMBL
Match:
A0A2N9G8B9 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23694 PE=4 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 1.5e-61
Identity = 158/451 (35.03%), Postives = 235/451 (52.11%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P KF++P+ + +D KDP+ H +++K M G + CRAF TL G + F KL
Sbjct: 246 LPSKFRMPSLEIFDGSKDPLDHLESFKTVMCLQGVPDEIMCRAFPTTLKGPARIWFKKLM 305
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYI-----STFSN---E 124
S+GSF +L+R F F+G + +P +LL +KQ E+LR Y+ ST + E
Sbjct: 306 PSSVGSFAQLSRLFFNHFIGGQRYGRPTTHLLNVKQKEGETLRSYLTRDPPSTMTEMMYE 365
Query: 125 AEREASGITAYDRKKDDREKKRRGD------EEHQDEAGCSTGR-GRANTKEGEGRGDLK 184
A+R +G A + KKR+GD E H+ R GR + G G +
Sbjct: 366 AQRYMNGEEALLARDQATGKKRKGDHADRPAEPHETRPKAQRNRNGRQEERSGRGFNE-- 425
Query: 185 GRFDKYTPLSVPPEKILTVVQNTDLLKCLEKLKTGPNSR--------------------- 244
RF+++TPL+ P + I ++N LK KL T P+ R
Sbjct: 426 -RFNRFTPLNAPVDHIFMQIRNDPALKWPGKLLTDPDKRPRDKYCRFHRDHGHNTENCYD 485
Query: 245 -KRKV--------------------GAREARLEPKHQGMYSLQFEKTTHA----LEFTEK 304
KR++ +R+A H + + + K + FTE+
Sbjct: 486 LKRQIEELIKQGKLQRFIEKGGTSRSSRKAYARQIHNVLVTQKSNKKPRVEDLPITFTEE 545
Query: 305 EAAGIHHPHNDALVVTLTIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRLKPSPTPL 364
+A + HPH+DALVVT+ I R+LID GSS D++ T F+ MK+GKD+L+P TPL
Sbjct: 546 DACKVVHPHDDALVVTMEIAGYSTRRVLIDNGSSADIIYLTAFQQMKIGKDQLQPIETPL 605
Query: 365 VGFGGEKVSPKGSIELPVTFGEGRQILTKMVNFLVVDCVSAYNTILGRSTLHELKAVTST 395
VGF G + P G + L + G + K VNFLVVDC SAYN I+GR TL+ L+AVTST
Sbjct: 606 VGFAGTSIYPLGMVTLQIIAGTHPKQAMKKVNFLVVDCPSAYNVIIGRPTLNRLRAVTST 665
BLAST of Lag0028811 vs. ExPASy TrEMBL
Match:
A0A2N9EL41 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3176 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 3.6e-60
Identity = 156/476 (32.77%), Postives = 236/476 (49.58%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P +FK+P + +D KDP + + +K M E CRAF L L G + F+KL
Sbjct: 165 LPSRFKVPLLENFDGTKDPFDYLEAFKTIMQLQAVPEEVMCRAFPLGLRGSARVWFNKLE 224
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYISTFSNEA---EREA 124
SIGSF +L+RAF+ F+G++ R +P I+LL++KQ ESLR ++ F+ EA +R
Sbjct: 225 SESIGSFVQLSRAFIDHFIGSQRRGRPPIHLLSVKQMEGESLRTFVHRFNEEAMKIDRPK 284
Query: 125 SGIT-AYDRKKDDREKKRRGDEEHQDEAGCSTGRGRANTKEGEGRGDLKGRFDKYTPLSV 184
+T A + D K+R+ E+ + E T E + +F +TPL+
Sbjct: 285 ENVTDALEAMDDPPPKRRKNTEDRKPEPAKQKVPKFTETPERKRTTAPPVKFSSFTPLNT 344
Query: 185 PPEKILTVVQNTDLLKCLEKLKTGPNSRKRKVGAREAR--------------------LE 244
P +K+L +Q+ L+ K+++ PNSR + + R R +
Sbjct: 345 PIDKLLLQIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEDCVALKEQVETLIRQ 404
Query: 245 PKHQGMYS-----------LQFEKTTH--------------------------------- 304
K Q S Q E+T H
Sbjct: 405 GKLQKYVSRPANTRPAKPPAQREQTEHNRPGPVGEIRTIIGGPASGGTSRASRKAYARQV 464
Query: 305 ------------------ALEFTEKEAAGIHHPHNDALVVTLTIVNAKVHRILIDGGSST 364
+ F+E++A G H PH+DALV+T+ I R+++D GSS
Sbjct: 465 HNIMVVQRPPKNVRLDDQIISFSEEDARGTHQPHDDALVITINIAGFTTRRVMVDNGSSA 524
Query: 365 DVLSTTVFEAMKLGKDRLKPSPTPLVGFGGEKVSPKGSIELPVTFGEGRQILTKMVNFLV 395
D+L ++ M+L KD+L+P PLVGF +KV P G + LP+T G + ++K V+FLV
Sbjct: 525 DILYLPTYQQMRLDKDKLRPMDAPLVGFTSDKVCPNGIVTLPITVGTHPKTVSKTVDFLV 584
BLAST of Lag0028811 vs. ExPASy TrEMBL
Match:
A0A2N9GGN7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26333 PE=4 SV=1)
HSP 1 Score: 241.5 bits (615), Expect = 6.1e-60
Identity = 153/458 (33.41%), Postives = 229/458 (50.00%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P +FK+P + +D KDP + + +K M E CRAF L L G + F+KL
Sbjct: 214 LPSRFKVPLLENFDGTKDPFDYLEAFKTVMQLQAVPEEVMCRAFPLGLRGSARVWFNKLE 273
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYISTFSNEA---EREA 124
SIGSF +L+RAF+ F+G++ R +P +LL++KQ ESLR ++ F+ EA +R
Sbjct: 274 SESIGSFVQLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNEEAMKIDRPK 333
Query: 125 SGIT----------------------------------------AYDRKKDDREKKRRGD 184
+T A + +D K+R+
Sbjct: 334 EDVTVTAFMAGLRKGDFLYELCKDPLETMSEFMYEATKHMNAEDALEAMEDPPPKRRKEA 393
Query: 185 EEHQDEAGCSTGRGRANTKEGEGRGDLKGRFDKYTPLSVPPEKILTVVQNTDLLKCLEKL 244
E H+ E T E + +F +TPL+ P +K+L +Q+ L+ K
Sbjct: 394 ENHKPEPAKQKVPKFTETPERKRTTAPPVKFSSFTPLNTPIDKLLLQIQDDPSLRWPAKP 453
Query: 245 KT---------------------GPNSRKRKVGAREARLEPKHQGMYSLQFEKT----TH 304
T GP S +R+A H M + K
Sbjct: 454 PTPREQAEHNRPGPVGEIRTIVGGPASGGTSKASRKAYARQIHNIMVVQRPPKNIRLDDQ 513
Query: 305 ALEFTEKEAAGIHHPHNDALVVTLTIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRL 364
+ F+E++A G H PH+DALV+T+ I R+++D GSS D+L ++ M+L KD+L
Sbjct: 514 IISFSEEDARGTHQPHDDALVITINIAGFTTRRVMVDNGSSADILYLPAYQQMRLDKDKL 573
Query: 365 KPSPTPLVGFGGEKVSPKGSIELPVTFGEGRQILTKMVNFLVVDCVSAYNTILGRSTLHE 395
+P PLVGF G+KV P G + LP+T G + ++K VNFLVV+C SAYN I+GR TL+
Sbjct: 574 RPMDAPLVGFTGDKVCPVGIVTLPITVGTHPKTVSKTVNFLVVNCPSAYNAIIGRPTLNR 633
BLAST of Lag0028811 vs. ExPASy TrEMBL
Match:
A0A2N9FSH1 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17781 PE=4 SV=1)
HSP 1 Score: 240.7 bits (613), Expect = 1.0e-59
Identity = 150/434 (34.56%), Postives = 228/434 (52.53%), Query Frame = 0
Query: 5 VPQKFKIPTFQQYDEKKDPVQHPDTYKPWMDFHGASEATKCRAFALTLTGMTKQQFSKLP 64
+P +FK+P + +D KDP + + +K M E CRAF L L G + F+KL
Sbjct: 149 LPSRFKVPLLENFDGTKDPFDYLEAFKTIMQLQAVPEEVMCRAFPLGLRGSARVWFNKLE 208
Query: 65 WRSIGSFKELARAFVMQFLGARDRRKPEINLLTIKQGPRESLRDYISTFSNEA-----ER 124
SIGSF +L+RAF+ F+G++ R +P +LL++KQ ESLR ++ F+ EA +
Sbjct: 209 SESIGSFVQLSRAFIDHFIGSQRRGRPPTHLLSVKQMEGESLRTFVHRFNEEAMKIDRPK 268
Query: 125 EASGITAY-----------DRKKDDREKKRRGDEEHQDEAGCSTGRGRANTKEGEGRGDL 184
E +TA+ +K R+ K R E + + T T E +
Sbjct: 269 EDVTVTAFMAGRPRGYGTTHHRKGGRKLKDRKPEPSKQKVPKFT-----ETPERKRTTAP 328
Query: 185 KGRFDKYTPLSVPPEKILTVVQNTDLLKCLEKLKT--GPNSRKRKVG-----AREARLEP 244
+F +TPL+ P +K+ + ++++ G N G E LE
Sbjct: 329 PVKFSSFTPLNTPIDKLTLADTRRPITSVARRVRSLEGTNRDTHPAGQTAEEKSEPSLED 388
Query: 245 KHQ------------GMYSLQFE---------KTTHALEFTEKEAAGIHHPHNDALVVTL 304
+HQ G Y+ + TT + +K+A G H PH+DALV+T+
Sbjct: 389 QHQEEPQEPQGKHMRGKYTTSWSSSAHQRTSASTTRSSLSAKKDARGTHQPHDDALVITI 448
Query: 305 TIVNAKVHRILIDGGSSTDVLSTTVFEAMKLGKDRLKPSPTPLVGFGGEKVSPKGSIELP 364
I R+++D GSS D+L ++ M+L KD+L+P PLVGF G+KV P G + LP
Sbjct: 449 NIAGFTTRRVMVDNGSSADILYLPAYQQMRLDKDKLRPMDAPLVGFTGDKVCPVGIVTLP 508
Query: 365 VTFGEGRQILTKMVNFLVVDCVSAYNTILGRSTLHELKAVTSTHYQILKFPTEEGVGVVH 395
+T G + ++K V+FLVV+C SAYN I+GR TL+ L+AVTST++ +LKFPTE G+G V
Sbjct: 509 ITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTYHLLLKFPTEHGIGEVR 568
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9EKU0 | 1.5e-61 | 35.03 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3233 PE=4 SV=1 | [more] |
A0A2N9G8B9 | 1.5e-61 | 35.03 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23694 PE=4 SV=1 | [more] |
A0A2N9EL41 | 3.6e-60 | 32.77 | Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3176 PE=4 SV=1 | [more] |
A0A2N9GGN7 | 6.1e-60 | 33.41 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26333 PE=4 SV=1 | [more] |
A0A2N9FSH1 | 1.0e-59 | 34.56 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17781 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |