Lag0028769 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028769
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase
Locationchr8: 30335337 .. 30336589 (-)
RNA-Seq ExpressionLag0028769
SyntenyLag0028769
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAGGGCAAGGGAGGAGCTTGGGGAATAGTGTTAGGGGAGGATGTTTGGTTGGGGAAGCGGAGTGTGAGTGTGGAGAAATGTGCGATGGCTGTAGAGGGTGAAGGGGTGAAGGGAAAAAGGCAAAAGAGTAACGTTGAGGGTGTTGAGGGGTAAAAAGTTTCGGTGAAACCTGTGAATCAGGGTCGCCGAGAGTTATGAAAATCATATGCTGGAATGTTCTGGGGTTGGAGAGCGCCCGAGCATTCAATGTACTGCACCAAGTGGTGCAAACTAATAATCCCCAACTTTTGTTTGTGACAGAATCGAAGATCACGAATCTAAAAGCGAATATGTATAAGGTGAAGATGAGGTTCGATGGAGTCCTTGTGGTGGATCGTGTGGGGAAGAGCGGGGGACTATGTCTGTTTTGGAAGGAGAGCCTGGATGTAGTATTGAGATCTTTCAATAGATTTCGTATAGATGTGGGGGTGAAAGCTGAGTTAGAACACTGGCCGTTTACAGGTTTTTATGGGGACCCAGAGGTGGCCAACATGGGTTATTCATGGGACTTGCTGCGGAGGCTGAGTAACTCCTCTTCCCTGCCATGGGTGATAGGAAGTGATTTTAATGAGATTGTTAGCATGAAAGAAAAGTGAGGTGGGAATGTTCGAAGCCAGAGTCAAATGCAAGCTTTTAGAGACGCGATTGATGACAGTGATTTGGTTGATATGAGCTTTAAAGGTTTTCCCTTCACGTGGTATAAAATGAAGGCGCGAGTGTTTATGTGCAGGAAAGGTTGGATCGAAGGTTATGCAATGTTGCCTTCTATAAGATGTTTCCATTCTCAGAGGTCCGCCATTTAGATTTTCAATTGTCTGATCACTGTCCCATTTTGATATAGGCTAAAATCTGTGCATCAGGGACTCGAAGGTATGGAAAACAAATATTCAGATTTGAGGAAGTGTGGACTCAGTTTGAGGAGTGTAGGGAGGTTGTGGAGAGAGAATGGGCCTTACCTAATCAGGTGTCAATGTTGGAGTAGAATCCTATTGTTGAAGTCTGGAATCATAGAGTTAAAAGGTATGCGGAGGAGTTGGCAAGTTGGGGAAAGACGAGATGTGGAAATTTTGAGTGAAGGATCTCAATGGCCAGCCATTAGTTACAAGCTACGCTTGATAGTAAGGGGATGTCTAGGGGGCAAGAAGGACGTTGGAGAATGTGTTGGGAGAAGAGGAAATCTACTGGCGGCAAAGGGCTTGAGTTGA

mRNA sequence

ATGGAAGAAGAGGGCAAGGGAGGAGCTTGGGGAATAGTGTTAGGGGAGGATGTTTGGTTGGGGAAGCGGAGTGTGAGTGTGGAGAAATGTGCGATGGCTGTAGAGGGGTCGCCGAGAGTTATGAAAATCATATGCTGGAATGTTCTGGGGTTGGAGAGCGCCCGAGCATTCAATGTACTGCACCAAGTGGTGCAAACTAATAATCCCCAACTTTTGTTTGTGACAGAATCGAAGATCACGAATCTAAAAGCGAATATGTATAAGGTGAAGATGAGGTTCGATGGAGTCCTTGTGGTGGATCGTGTGGGGAAGAGCGGGGGACTATGTCTGTTTTGGAAGGAGAGCCTGGATGTAGTATTGAGATCTTTCAATAGATTTCGTATAGATGTGGGGGTGAAAGCTGAGTTAGAACACTGGCCGTTTACAGGTTTTTATGGGGACCCAGAGGTGGCCAACATGGGTTATTCATGGGACTTGCTGCGGAGGCTGAGTAACTCCTCTTCCCTGCCATGGGTGATAGGAAGTGATTTTAATGAGATTGTTAGCATGAAAGAAAAGCTAAAATCTGTGCATCAGGGACTCGAAGGTATGGAAAACAAATATTCAGATTTGAGGAAGTGTGGACTCAGTTTGAGGAGTGTAGGGAGGTTGTGGAGAGAGAATGGGCCTTACCTAATCAGGTGTCAATGTTGGAGTAGAATCCTATTGTTGAAGTCTGGAATCATAGAGTTAAAAGGTATGCGGAGGAGTTGGCAAGTTGGGGAAAGACGAGATGTGGAAATTTTGAGTGAAGGATCTCAATGGCCAGCCATTAGTTACAAGCTACGCTTGATAGTAAGGGGATGTCTAGGGGGCAAGAAGGACGTTGGAGAATGTGTTGGGAGAAGAGGAAATCTACTGGCGGCAAAGGGCTTGAGTTGA

Coding sequence (CDS)

ATGGAAGAAGAGGGCAAGGGAGGAGCTTGGGGAATAGTGTTAGGGGAGGATGTTTGGTTGGGGAAGCGGAGTGTGAGTGTGGAGAAATGTGCGATGGCTGTAGAGGGGTCGCCGAGAGTTATGAAAATCATATGCTGGAATGTTCTGGGGTTGGAGAGCGCCCGAGCATTCAATGTACTGCACCAAGTGGTGCAAACTAATAATCCCCAACTTTTGTTTGTGACAGAATCGAAGATCACGAATCTAAAAGCGAATATGTATAAGGTGAAGATGAGGTTCGATGGAGTCCTTGTGGTGGATCGTGTGGGGAAGAGCGGGGGACTATGTCTGTTTTGGAAGGAGAGCCTGGATGTAGTATTGAGATCTTTCAATAGATTTCGTATAGATGTGGGGGTGAAAGCTGAGTTAGAACACTGGCCGTTTACAGGTTTTTATGGGGACCCAGAGGTGGCCAACATGGGTTATTCATGGGACTTGCTGCGGAGGCTGAGTAACTCCTCTTCCCTGCCATGGGTGATAGGAAGTGATTTTAATGAGATTGTTAGCATGAAAGAAAAGCTAAAATCTGTGCATCAGGGACTCGAAGGTATGGAAAACAAATATTCAGATTTGAGGAAGTGTGGACTCAGTTTGAGGAGTGTAGGGAGGTTGTGGAGAGAGAATGGGCCTTACCTAATCAGGTGTCAATGTTGGAGTAGAATCCTATTGTTGAAGTCTGGAATCATAGAGTTAAAAGGTATGCGGAGGAGTTGGCAAGTTGGGGAAAGACGAGATGTGGAAATTTTGAGTGAAGGATCTCAATGGCCAGCCATTAGTTACAAGCTACGCTTGATAGTAAGGGGATGTCTAGGGGGCAAGAAGGACGTTGGAGAATGTGTTGGGAGAAGAGGAAATCTACTGGCGGCAAAGGGCTTGAGTTGA

Protein sequence

MEEEGKGGAWGIVLGEDVWLGKRSVSVEKCAMAVEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAELEHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGLSLRSVGRLWRENGPYLIRCQCWSRILLLKSGIIELKGMRRSWQVGERRDVEILSEGSQWPAISYKLRLIVRGCLGGKKDVGECVGRRGNLLAAKGLS
Homology
BLAST of Lag0028769 vs. NCBI nr
Match: TXG69190.1 (hypothetical protein EZV62_004125 [Acer yangbiense])

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-29
Identity = 71/161 (44.10%), Postives = 93/161 (57.76%), Query Frame = 0

Query: 50  GLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLC 109
           GL   RAF VLH ++Q N+P ++F+ E    +      ++K+ FD  LVVDR G SGGLC
Sbjct: 368 GLGGDRAFRVLHSLLQVNHPDIVFLIEIICVHKAMESVRIKLGFDAKLVVDRKGHSGGLC 427

Query: 110 LFWKESLDVVLRSFNRFRIDVGVKAELEH-WPFTGFYGDPEVANMGYSWDLLRRLSNSSS 169
           L WK  +DV L S++RF ID  V    +  W  TGFYG P +    + W+LLRRL+  S 
Sbjct: 428 LLWKAEIDVALLSYSRFHIDTVVTLRNDKVWRLTGFYGHPNLTQRIHGWNLLRRLAGMSP 487

Query: 170 LPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL 210
           LPW +G DFNEIV + EK+    +    M N    L  CGL
Sbjct: 488 LPWFVGGDFNEIVGLSEKVGGNTRHECFMGNFQEALEDCGL 528

BLAST of Lag0028769 vs. NCBI nr
Match: KAA3484396.1 (reverse transcriptase [Gossypium australe])

HSP 1 Score: 138.7 bits (348), Expect = 8.7e-29
Identity = 70/171 (40.94%), Postives = 101/171 (59.06%), Query Frame = 0

Query: 41  MKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVD 100
           MK +CWNV GL S+RA   L  +++ ++PQL+F+ E+K+   +    + +  FD  + V+
Sbjct: 1   MKSLCWNVRGLGSSRAVRRLRFLIKQHHPQLVFLMETKLNKQRMGTVRRRCGFDFGIEVE 60

Query: 101 RVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAE--LEHWPFTGFYGDPEVANMGYSWD 160
             G  GGLCL WK+ LDV L+SF+++ IDV +K E   E W FTGFYG P   +    WD
Sbjct: 61  AEGSKGGLCLAWKKDLDVKLKSFSKWHIDVLIKEENVEEDWKFTGFYGSPYSKDKNLVWD 120

Query: 161 LLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL 210
           LL+RL+  S  PW++  DFNEI+   EK   + +  + ME     L  C L
Sbjct: 121 LLKRLAQESDYPWLVEGDFNEILYSFEKCGGIPRDSKRMEVFRETLVDCQL 171

BLAST of Lag0028769 vs. NCBI nr
Match: VFQ82721.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-27
Identity = 75/177 (42.37%), Postives = 97/177 (54.80%), Query Frame = 0

Query: 34  VEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRF 93
           V G PR M II WN  GL + R    + ++V    P  +F+ E+K    KA + +VK+ F
Sbjct: 223 VPGPPRAMSIISWNCRGLGNLRTVQEVAELVFAKKPDFVFLMETKGARDKAEVLRVKIGF 282

Query: 94  DGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVK-AELEHWPFTGFYGDPEVAN 153
           +G+L VD VG SGGL L W+ +  V L S++RF +DV V       W  TGFYG+P    
Sbjct: 283 EGLLAVDSVGTSGGLALLWRSNRSVNLISYSRFHVDVMVSLGGALPWRLTGFYGNPRRDL 342

Query: 154 MGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL 210
              SWDLLR L   SSLPWV  SDFN + +  EK     Q L  +    S L +CGL
Sbjct: 343 RQTSWDLLRSLKVRSSLPWVAISDFNAVCASSEKRGGQPQPLSLISAFNSTLEECGL 399

BLAST of Lag0028769 vs. NCBI nr
Match: TXG68544.1 (hypothetical protein EZV62_003479 [Acer yangbiense])

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-27
Identity = 64/155 (41.29%), Postives = 97/155 (62.58%), Query Frame = 0

Query: 44  ICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVG 103
           +CWNVLGL + RAF  L ++++ ++P L+F++++K    KA+  KV + F+    VD  G
Sbjct: 4   LCWNVLGLGNPRAFAALRRLMKKHSPDLVFLSKTKSNGFKADNVKVSLGFNNCFSVDSCG 63

Query: 104 KSGGLCLFWKESLDVVLRSFNRFRIDVGVK-AELEHWPFTGFYGDPEVANMGYSWDLLRR 163
            SGGL L WK+S+ V + SF+   ID  +  ++   W F+GFYGDP      +SW LLRR
Sbjct: 64  NSGGLLLLWKDSIVVSVLSFSSGHIDARISMSDGFVWHFSGFYGDPNPNKRRFSWSLLRR 123

Query: 164 LSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGM 198
           L +++SL WV G +FNE++SM +K     +   GM
Sbjct: 124 LRDTNSLSWVYGDNFNELLSMSDKAGGSDKSFSGM 158

BLAST of Lag0028769 vs. NCBI nr
Match: VFQ58504.1 (unnamed protein product [Cuscuta campestris])

HSP 1 Score: 133.3 bits (334), Expect = 3.6e-27
Identity = 74/177 (41.81%), Postives = 97/177 (54.80%), Query Frame = 0

Query: 34  VEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRF 93
           V G PR M II WN  GL + R    + ++V    P  +F+ E+K    KA + +VK+ F
Sbjct: 195 VPGPPRAMSIISWNCRGLGNLRIVQEVAELVFAKKPDFVFLMETKGARDKAEVLRVKIGF 254

Query: 94  DGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAE-LEHWPFTGFYGDPEVAN 153
           +G+ VVD VG SGGL L W+ +  V L S++RF +DV V  E    W  TGFYG+P    
Sbjct: 255 EGLFVVDSVGASGGLALLWRSNRSVNLISYSRFHVDVMVSLEGALPWRLTGFYGNPRRDL 314

Query: 154 MGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL 210
              SWDLLR L   SSLPWV+  DFN + +  EK     Q L  +    S L +C L
Sbjct: 315 RQTSWDLLRSLKVRSSLPWVVIGDFNAVCASSEKRGGQPQPLSLISAFNSTLAECRL 371

BLAST of Lag0028769 vs. ExPASy TrEMBL
Match: A0A5C7IIT4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.4e-30
Identity = 71/161 (44.10%), Postives = 93/161 (57.76%), Query Frame = 0

Query: 50  GLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVDRVGKSGGLC 109
           GL   RAF VLH ++Q N+P ++F+ E    +      ++K+ FD  LVVDR G SGGLC
Sbjct: 368 GLGGDRAFRVLHSLLQVNHPDIVFLIEIICVHKAMESVRIKLGFDAKLVVDRKGHSGGLC 427

Query: 110 LFWKESLDVVLRSFNRFRIDVGVKAELEH-WPFTGFYGDPEVANMGYSWDLLRRLSNSSS 169
           L WK  +DV L S++RF ID  V    +  W  TGFYG P +    + W+LLRRL+  S 
Sbjct: 428 LLWKAEIDVALLSYSRFHIDTVVTLRNDKVWRLTGFYGHPNLTQRIHGWNLLRRLAGMSP 487

Query: 170 LPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL 210
           LPW +G DFNEIV + EK+    +    M N    L  CGL
Sbjct: 488 LPWFVGGDFNEIVGLSEKVGGNTRHECFMGNFQEALEDCGL 528

BLAST of Lag0028769 vs. ExPASy TrEMBL
Match: A0A803QLY3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.2e-29
Identity = 72/171 (42.11%), Postives = 100/171 (58.48%), Query Frame = 0

Query: 22  KRSVSVEKCAMAVE----GSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTES 81
           +R VSV+K + A +    GSP  M  + WNV GL +      L+ +V  + PQL+F+ ES
Sbjct: 275 RRKVSVKKDSKAKKGKNGGSPTAMNTLLWNVQGLGNPWTIRSLNSLVIRHTPQLVFIMES 334

Query: 82  KITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAEL- 141
           K+ N+ A    VK+ F G  VV+  GKSG L L W E ++  + SF+ F ID  ++ E  
Sbjct: 335 KLNNVSAEALHVKLGFGGCFVVEAKGKSGCLLLLWSEKVETHVLSFSPFHIDSFIRMEEG 394

Query: 142 EHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKL 188
           + W FT FYGDP+ +    SW LL R+    S PW +G DFNEI+S KEK+
Sbjct: 395 QWWRFTSFYGDPDPSQRTQSWKLLNRICRMYSGPWAVGGDFNEILSQKEKM 445

BLAST of Lag0028769 vs. ExPASy TrEMBL
Match: A0A5B6WSX4 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_006480 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.2e-29
Identity = 70/171 (40.94%), Postives = 101/171 (59.06%), Query Frame = 0

Query: 41  MKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGVLVVD 100
           MK +CWNV GL S+RA   L  +++ ++PQL+F+ E+K+   +    + +  FD  + V+
Sbjct: 1   MKSLCWNVRGLGSSRAVRRLRFLIKQHHPQLVFLMETKLNKQRMGTVRRRCGFDFGIEVE 60

Query: 101 RVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAE--LEHWPFTGFYGDPEVANMGYSWD 160
             G  GGLCL WK+ LDV L+SF+++ IDV +K E   E W FTGFYG P   +    WD
Sbjct: 61  AEGSKGGLCLAWKKDLDVKLKSFSKWHIDVLIKEENVEEDWKFTGFYGSPYSKDKNLVWD 120

Query: 161 LLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEGMENKYSDLRKCGL 210
           LL+RL+  S  PW++  DFNEI+   EK   + +  + ME     L  C L
Sbjct: 121 LLKRLAQESDYPWLVEGDFNEILYSFEKCGGIPRDSKRMEVFRETLVDCQL 171

BLAST of Lag0028769 vs. ExPASy TrEMBL
Match: A0A803PBM9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.3e-29
Identity = 68/152 (44.74%), Postives = 92/152 (60.53%), Query Frame = 0

Query: 37  SPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTESKITNLKANMYKVKMRFDGV 96
           SP +MK++ WNV GL +      L  +V   +P+L+F++ES++   KA   +V + +DG 
Sbjct: 423 SPTIMKLLLWNVQGLGNPWTVRTLKSLVNRWDPELVFISESRLKKGKAEALRVSLGYDGC 482

Query: 97  LVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGV-KAELEHWPFTGFYGDPEVANMGY 156
            VV+  GKSGGL L W   +D  + SF+ F ID  + K E + W FTGFYGDP+      
Sbjct: 483 FVVEAHGKSGGLILLWSNMVDCNIMSFSSFHIDSFIRKEEGQWWRFTGFYGDPDPTQRCE 542

Query: 157 SWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKL 188
           SW LL R+    S PWVIG DFNEI+  KEKL
Sbjct: 543 SWKLLARIGRMYSGPWVIGGDFNEILRNKEKL 574

BLAST of Lag0028769 vs. ExPASy TrEMBL
Match: A0A803QCP7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-28
Identity = 76/199 (38.19%), Postives = 112/199 (56.28%), Query Frame = 0

Query: 22   KRSVSVEKCAM----AVEGSPRVMKIICWNVLGLESARAFNVLHQVVQTNNPQLLFVTES 81
            +R VSV+K +      +EGSP  M ++ WNV GL +    + LH  V + NP+++F++E 
Sbjct: 809  RRKVSVKKDSKEKKGKIEGSPVAMSLLIWNVQGLGNPWTVHSLHFRVSSYNPEMVFISEW 868

Query: 82   KITNLKANMYKVKMRFDGVLVVDRVGKSGGLCLFWKESLDVVLRSFNRFRIDVGVKAEL- 141
            ++  + A   +VK+ F G  VV+  GKSGG+ LFW   ++  + SF+ F ID  ++ E  
Sbjct: 869  RLNKVHAETLRVKLGFSGCFVVEARGKSGGVSLFWSMDVETQVLSFSPFHIDSFIRMEEG 928

Query: 142  EHWPFTGFYGDPEVANMGYSWDLLRRLSNSSSLPWVIGSDFNEIVSMKEKLKSVHQGLEG 201
            + W FTGFYGDP+     +S  LL+RLS      W +G DFNEI+S KEK+    +    
Sbjct: 929  QWWRFTGFYGDPDPTQRIHSCKLLKRLSCMYLGTWAVGGDFNEILSQKEKMGDSSKSSYL 988

Query: 202  MENKYSDLRKCGLSLRSVG 216
            + N    L  C   LR VG
Sbjct: 989  INNFRKALDSC--QLRDVG 1005

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TXG69190.11.7e-2944.10hypothetical protein EZV62_004125 [Acer yangbiense][more]
KAA3484396.18.7e-2940.94reverse transcriptase [Gossypium australe][more]
VFQ82721.11.2e-2742.37unnamed protein product [Cuscuta campestris][more]
TXG68544.11.6e-2741.29hypothetical protein EZV62_003479 [Acer yangbiense][more]
VFQ58504.13.6e-2741.81unnamed protein product [Cuscuta campestris][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7IIT48.4e-3044.10Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1[more]
A0A803QLY33.2e-2942.11Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A5B6WSX44.2e-2940.94Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_006480 PE=4 SV=1[more]
A0A803PBM99.3e-2944.74Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QCP71.6e-2838.19Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 37..263
e-value: 1.5E-14
score: 56.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 38..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028769.1Lag0028769.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0003824 catalytic activity